RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 APCP25054 2843 aa9.41□□□□□ -0.9
ARHGEF28-203ENST00000426542 H0YAA0 97 aa9.4□□□□□ -0.9
ARHGEF28-203ENST00000426542 CDH23Q9H251 3354 aa9.38□□□□□ -0.91
ARHGEF28-203ENST00000426542 TPRXLQ17RH7 258 aa9.36□□□□□ -0.91
ARHGEF28-203ENST00000426542 KRTAP10-10P60014 251 aa9.35□□□□□ -0.91
ARHGEF28-203ENST00000426542 UTP20O75691 2785 aaKnown RBP9.34□□□□□ -0.91
ARHGEF28-203ENST00000426542 TACC2O95359 2948 aa9.28□□□□□ -0.92
ARHGEF28-203ENST00000426542 HIVEP1P15822 2718 aa9.28□□□□□ -0.92
ARHGEF28-203ENST00000426542 P0C880 135 aa9.28□□□□□ -0.92
ARHGEF28-203ENST00000426542 LRBAP50851 2863 aa9.27□□□□□ -0.93
ARHGEF28-203ENST00000426542 CRYBG3Q68DQ2 2970 aa9.25□□□□□ -0.93
ARHGEF28-203ENST00000426542 DMXL2Q8TDJ6 3036 aa9.23□□□□□ -0.93
ARHGEF28-203ENST00000426542 ATMQ13315 3056 aa9.23□□□□□ -0.93
ARHGEF28-203ENST00000426542 COL6A3P12111 3177 aa9.22□□□□□ -0.93
ARHGEF28-203ENST00000426542 PRO2289Q9P1D8 64 aa9.22□□□□□ -0.93
ARHGEF28-203ENST00000426542 DNAH14Q0VDD8 3507 aa9.22□□□□□ -0.93
ARHGEF28-203ENST00000426542 KRTAP13-3Q3SY46 172 aa9.21□□□□□ -0.94
ARHGEF28-203ENST00000426542 ASH1LQ9NR48 2969 aaKnown RBP9.2□□□□□ -0.94
ARHGEF28-203ENST00000426542 COL12A1Q99715 3063 aa9.17□□□□□ -0.94
ARHGEF28-203ENST00000426542 VCANP13611 3396 aa9.13□□□□□ -0.95
ARHGEF28-203ENST00000426542 REV3LO60673 3130 aa9.12□□□□□ -0.95
ARHGEF28-203ENST00000426542 SZT2Q5T011 3432 aa9.11□□□□□ -0.95
ARHGEF28-203ENST00000426542 LAMA1P25391 3075 aa9.1□□□□□ -0.95
ARHGEF28-203ENST00000426542 ADGRG4Q8IZF6 3080 aa9.07□□□□□ -0.96
ARHGEF28-203ENST00000426542 CFAP47Q6ZTR5 3102 aa9.07□□□□□ -0.96
ARHGEF28-203ENST00000426542 FLNCQ14315 2725 aa9.06□□□□□ -0.96
ARHGEF28-203ENST00000426542 TENM4Q6N022 2769 aa9.06□□□□□ -0.96
ARHGEF28-203ENST00000426542 BOD1L1Q8NFC6 3051 aa9.05□□□□□ -0.96
ARHGEF28-203ENST00000426542 FRYLO94915 3013 aa9.05□□□□□ -0.96
ARHGEF28-203ENST00000426542 NBEAQ8NFP9 2946 aa8.98□□□□□ -0.97
ARHGEF28-203ENST00000426542 CELSR2Q9HCU4 2923 aa8.97□□□□□ -0.97
ARHGEF28-203ENST00000426542 EYSQ5T1H1 3165 aa8.95□□□□□ -0.98
ARHGEF28-203ENST00000426542 NIPBLQ6KC79 2804 aaeCLIP8.94□□□□□ -0.98
ARHGEF28-203ENST00000426542 ZZEF1O43149 2961 aa8.93□□□□□ -0.98
ARHGEF28-203ENST00000426542 KRTAP12-2P59991 146 aa8.9□□□□□ -0.98
ARHGEF28-203ENST00000426542 DCHS2Q6V1P9 2916 aa8.87□□□□□ -0.99
ARHGEF28-203ENST00000426542 USP34Q70CQ2 3546 aa8.84□□□□□ -0.99
ARHGEF28-203ENST00000426542 SPEGQ15772 3267 aa8.83□□□□□ -1
ARHGEF28-203ENST00000426542 SPTBN5Q9NRC6 3674 aaKnown RBP8.77□□□□□ -1
ARHGEF28-203ENST00000426542 KRTAP13-4Q3LI77 160 aa8.74□□□□□ -1.01
ARHGEF28-203ENST00000426542 TENM1Q9UKZ4 2725 aa8.72□□□□□ -1.01
ARHGEF28-203ENST00000426542 TENM2Q9NT68 2774 aa8.71□□□□□ -1.01
ARHGEF28-203ENST00000426542 TNRC18O15417 2968 aaPredicted RBP8.7□□□□□ -1.02
ARHGEF28-203ENST00000426542 HRNRQ86YZ3 2850 aaPredicted RBP8.68□□□□□ -1.02
ARHGEF28-203ENST00000426542 KRTAP12-1P59990 96 aa8.67□□□□□ -1.02
ARHGEF28-203ENST00000426542 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
ARHGEF28-203ENST00000426542 TGP01266 2768 aa8.67□□□□□ -1.02
ARHGEF28-203ENST00000426542 NF1P21359 2839 aa8.6□□□□□ -1.03
ARHGEF28-203ENST00000426542 CELSR1Q9NYQ6 3014 aa8.57□□□□□ -1.04
ARHGEF28-203ENST00000426542 FBN2P35556 2912 aa8.57□□□□□ -1.04
ARHGEF28-203ENST00000426542 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
ARHGEF28-203ENST00000426542 TENM3Q9P273 2699 aa8.56□□□□□ -1.04
ARHGEF28-203ENST00000426542 DMXL1Q9Y485 3027 aa8.54□□□□□ -1.04
ARHGEF28-203ENST00000426542 KRTAP15-1Q3LI76 137 aa8.51□□□□□ -1.05
ARHGEF28-203ENST00000426542 LOC400499M0QZD8 3231 aa8.39□□□□□ -1.07
ARHGEF28-203ENST00000426542 WDFY3Q8IZQ1 3526 aa8.34□□□□□ -1.07
ARHGEF28-203ENST00000426542 KRTAP10-6P60371 365 aaPredicted RBP8.32□□□□□ -1.08
ARHGEF28-203ENST00000426542 PKD1L1Q8TDX9 2849 aa8.27□□□□□ -1.09
ARHGEF28-203ENST00000426542 MYO15AQ9UKN7 3530 aa8.24□□□□□ -1.09
ARHGEF28-203ENST00000426542 MXRA5Q9NR99 2828 aa8.23□□□□□ -1.09
ARHGEF28-203ENST00000426542 PDZD2O15018 2839 aa8.22□□□□□ -1.09
ARHGEF28-203ENST00000426542 NBPF19A0A087WUL8 3843 aa8.22□□□□□ -1.09
ARHGEF28-203ENST00000426542 VWFP04275 2813 aa8.21□□□□□ -1.09
ARHGEF28-203ENST00000426542 ASPMQ8IZT6 3477 aa8.21□□□□□ -1.1
ARHGEF28-203ENST00000426542 RELNP78509 3460 aa8.19□□□□□ -1.1
ARHGEF28-203ENST00000426542 CRCT1Q9UGL9 99 aa8.11□□□□□ -1.11
ARHGEF28-203ENST00000426542 MT1HL1P0DM35 61 aa8.09□□□□□ -1.11
ARHGEF28-203ENST00000426542 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
ARHGEF28-203ENST00000426542 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
ARHGEF28-203ENST00000426542 ZFHX4Q86UP3 3567 aa8.04□□□□□ -1.12
ARHGEF28-203ENST00000426542 ANK3Q12955 4377 aaKnown RBP8□□□□□ -1.13
ARHGEF28-203ENST00000426542 KRTAP3-2Q9BYR7 98 aa7.99□□□□□ -1.13
ARHGEF28-203ENST00000426542 KRTAP3-3Q9BYR6 98 aa7.99□□□□□ -1.13
ARHGEF28-203ENST00000426542 CSMD1Q96PZ7 3565 aa7.97□□□□□ -1.13
ARHGEF28-203ENST00000426542 INE1O15225 51 aa7.94□□□□□ -1.14
ARHGEF28-203ENST00000426542 KRTAP4-5Q9BYR2 181 aa7.87□□□□□ -1.15
ARHGEF28-203ENST00000426542 LAMA5O15230 3695 aa7.84□□□□□ -1.16
ARHGEF28-203ENST00000426542 FBN3Q75N90 2809 aa7.82□□□□□ -1.16
ARHGEF28-203ENST00000426542 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
ARHGEF28-203ENST00000426542 MEGF8Q7Z7M0 2845 aa7.8□□□□□ -1.16
ARHGEF28-203ENST00000426542 ZFHX3Q15911 3703 aa7.78□□□□□ -1.16
ARHGEF28-203ENST00000426542 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
ARHGEF28-203ENST00000426542 FBN1P35555 2871 aaKnown RBP7.76□□□□□ -1.17
ARHGEF28-203ENST00000426542 LCE3AQ5TA76 89 aa7.75□□□□□ -1.17
ARHGEF28-203ENST00000426542 OTOGQ6ZRI0 2925 aa7.74□□□□□ -1.17
ARHGEF28-203ENST00000426542 SMG1Q96Q15 3661 aaKnown RBP7.7□□□□□ -1.18
ARHGEF28-203ENST00000426542 HUWE1Q7Z6Z7 4374 aaKnown RBP7.7□□□□□ -1.18
ARHGEF28-203ENST00000426542 SRRM2Q9UQ35 2752 aaKnown RBP7.67□□□□□ -1.18
ARHGEF28-203ENST00000426542 ALMS1Q8TCU4 4167 aa7.62□□□□□ -1.19
ARHGEF28-203ENST00000426542 KRTAP23-1A1A580 65 aa7.61□□□□□ -1.19
ARHGEF28-203ENST00000426542 LORP23490 312 aaPredicted RBP7.61□□□□□ -1.19
ARHGEF28-203ENST00000426542 COL7A1Q02388 2944 aa7.59□□□□□ -1.19
ARHGEF28-203ENST00000426542 TRRAPQ9Y4A5 3859 aa7.58□□□□□ -1.2
ARHGEF28-203ENST00000426542 MUC3AQ02505 3323 aa7.58□□□□□ -1.2
ARHGEF28-203ENST00000426542 SVEP1Q4LDE5 3571 aa7.56□□□□□ -1.2
ARHGEF28-203ENST00000426542 DMDP11532 3685 aa7.53□□□□□ -1.2
ARHGEF28-203ENST00000426542 CSMD2Q7Z408 3487 aa7.52□□□□□ -1.21
ARHGEF28-203ENST00000426542 KRTAP8-1Q8IUC2 63 aa7.47□□□□□ -1.21
ARHGEF28-203ENST00000426542 KRTAP10-5P60370 271 aa7.46□□□□□ -1.22
ARHGEF28-203ENST00000426542 SPENQ96T58 3664 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms