RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 KALRNO60229 2985 aa6.25□□□□□ -1.41
LAMA4-207ENST00000424408 ITPR1Q14643 2758 aa6.22□□□□□ -1.41
LAMA4-207ENST00000424408 TACC2O95359 2948 aa6.17□□□□□ -1.42
LAMA4-207ENST00000424408 KRTAP12-2P59991 146 aa6.16□□□□□ -1.42
LAMA4-207ENST00000424408 KMT2BQ9UMN6 2715 aaPredicted RBP6.15□□□□□ -1.42
LAMA4-207ENST00000424408 ATMQ13315 3056 aa6.15□□□□□ -1.43
LAMA4-207ENST00000424408 DMXL2Q8TDJ6 3036 aa6.15□□□□□ -1.43
LAMA4-207ENST00000424408 KRTAP10-10P60014 251 aa6.13□□□□□ -1.43
LAMA4-207ENST00000424408 APCP25054 2843 aa6.13□□□□□ -1.43
LAMA4-207ENST00000424408 UTP20O75691 2785 aaKnown RBP6.13□□□□□ -1.43
LAMA4-207ENST00000424408 LAMA1P25391 3075 aa6.12□□□□□ -1.43
LAMA4-207ENST00000424408 LRBAP50851 2863 aa6.12□□□□□ -1.43
LAMA4-207ENST00000424408 DNAH14Q0VDD8 3507 aa6.12□□□□□ -1.43
LAMA4-207ENST00000424408 VCANP13611 3396 aa6.11□□□□□ -1.43
LAMA4-207ENST00000424408 HIVEP1P15822 2718 aa6.11□□□□□ -1.43
LAMA4-207ENST00000424408 PRO2289Q9P1D8 64 aa6.11□□□□□ -1.43
LAMA4-207ENST00000424408 COL12A1Q99715 3063 aa6.11□□□□□ -1.43
LAMA4-207ENST00000424408 SZT2Q5T011 3432 aa6.1□□□□□ -1.43
LAMA4-207ENST00000424408 ASH1LQ9NR48 2969 aaKnown RBP6.09□□□□□ -1.43
LAMA4-207ENST00000424408 TPRXLQ17RH7 258 aa6.09□□□□□ -1.43
LAMA4-207ENST00000424408 COL6A3P12111 3177 aa6.09□□□□□ -1.44
LAMA4-207ENST00000424408 FLNCQ14315 2725 aa6.08□□□□□ -1.44
LAMA4-207ENST00000424408 ADGRG4Q8IZF6 3080 aa6.08□□□□□ -1.44
LAMA4-207ENST00000424408 KRTAP13-3Q3SY46 172 aa6.07□□□□□ -1.44
LAMA4-207ENST00000424408 FRYLO94915 3013 aa6.07□□□□□ -1.44
LAMA4-207ENST00000424408 NBEAQ8NFP9 2946 aa6.06□□□□□ -1.44
LAMA4-207ENST00000424408 BOD1L1Q8NFC6 3051 aa6.06□□□□□ -1.44
LAMA4-207ENST00000424408 TNRC18O15417 2968 aaPredicted RBP6.05□□□□□ -1.44
LAMA4-207ENST00000424408 REV3LO60673 3130 aa6.05□□□□□ -1.44
LAMA4-207ENST00000424408 CRYBG3Q68DQ2 2970 aa6.03□□□□□ -1.44
LAMA4-207ENST00000424408 TENM4Q6N022 2769 aa6.02□□□□□ -1.45
LAMA4-207ENST00000424408 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
LAMA4-207ENST00000424408 CFAP47Q6ZTR5 3102 aa6□□□□□ -1.45
LAMA4-207ENST00000424408 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
LAMA4-207ENST00000424408 CELSR2Q9HCU4 2923 aa5.96□□□□□ -1.45
LAMA4-207ENST00000424408 ZZEF1O43149 2961 aa5.94□□□□□ -1.46
LAMA4-207ENST00000424408 NIPBLQ6KC79 2804 aaeCLIP5.93□□□□□ -1.46
LAMA4-207ENST00000424408 EYSQ5T1H1 3165 aa5.91□□□□□ -1.46
LAMA4-207ENST00000424408 DCHS2Q6V1P9 2916 aa5.88□□□□□ -1.47
LAMA4-207ENST00000424408 SPEGQ15772 3267 aa5.85□□□□□ -1.47
LAMA4-207ENST00000424408 USP34Q70CQ2 3546 aa5.83□□□□□ -1.48
LAMA4-207ENST00000424408 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
LAMA4-207ENST00000424408 ZANQ9Y493 2812 aa5.82□□□□□ -1.48
LAMA4-207ENST00000424408 KRTAP3-1Q9BYR8 98 aa5.81□□□□□ -1.48
LAMA4-207ENST00000424408 SPTBN5Q9NRC6 3674 aaKnown RBP5.78□□□□□ -1.48
LAMA4-207ENST00000424408 HRNRQ86YZ3 2850 aaPredicted RBP5.76□□□□□ -1.49
LAMA4-207ENST00000424408 DMXL1Q9Y485 3027 aa5.74□□□□□ -1.49
LAMA4-207ENST00000424408 INE1O15225 51 aa5.73□□□□□ -1.49
LAMA4-207ENST00000424408 FBN2P35556 2912 aa5.72□□□□□ -1.49
LAMA4-207ENST00000424408 TENM1Q9UKZ4 2725 aa5.71□□□□□ -1.5
LAMA4-207ENST00000424408 NF1P21359 2839 aa5.7□□□□□ -1.5
LAMA4-207ENST00000424408 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
LAMA4-207ENST00000424408 LOC400499M0QZD8 3231 aa5.66□□□□□ -1.5
LAMA4-207ENST00000424408 TENM3Q9P273 2699 aa5.66□□□□□ -1.5
LAMA4-207ENST00000424408 TGP01266 2768 aa5.65□□□□□ -1.51
LAMA4-207ENST00000424408 TENM2Q9NT68 2774 aa5.65□□□□□ -1.51
LAMA4-207ENST00000424408 CELSR1Q9NYQ6 3014 aa5.64□□□□□ -1.51
LAMA4-207ENST00000424408 MYO15AQ9UKN7 3530 aa5.54□□□□□ -1.52
LAMA4-207ENST00000424408 MXRA5Q9NR99 2828 aa5.52□□□□□ -1.53
LAMA4-207ENST00000424408 WDFY3Q8IZQ1 3526 aa5.49□□□□□ -1.53
LAMA4-207ENST00000424408 PKD1L1Q8TDX9 2849 aa5.48□□□□□ -1.53
LAMA4-207ENST00000424408 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
LAMA4-207ENST00000424408 RELNP78509 3460 aa5.46□□□□□ -1.54
LAMA4-207ENST00000424408 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
LAMA4-207ENST00000424408 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
LAMA4-207ENST00000424408 VWFP04275 2813 aa5.41□□□□□ -1.54
LAMA4-207ENST00000424408 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
LAMA4-207ENST00000424408 PDZD2O15018 2839 aa5.4□□□□□ -1.54
LAMA4-207ENST00000424408 DCHS1Q96JQ0 3298 aa5.4□□□□□ -1.54
LAMA4-207ENST00000424408 ASPMQ8IZT6 3477 aa5.38□□□□□ -1.55
LAMA4-207ENST00000424408 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
LAMA4-207ENST00000424408 NBPF19A0A087WUL8 3843 aa5.33□□□□□ -1.56
LAMA4-207ENST00000424408 OTOGQ6ZRI0 2925 aa5.32□□□□□ -1.56
LAMA4-207ENST00000424408 KRTAP12-3P60328 96 aa5.3□□□□□ -1.56
LAMA4-207ENST00000424408 ZFHX4Q86UP3 3567 aa5.29□□□□□ -1.56
LAMA4-207ENST00000424408 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
LAMA4-207ENST00000424408 CSMD1Q96PZ7 3565 aa5.26□□□□□ -1.57
LAMA4-207ENST00000424408 LAMA5O15230 3695 aa5.25□□□□□ -1.57
LAMA4-207ENST00000424408 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
LAMA4-207ENST00000424408 FBN1P35555 2871 aaKnown RBP5.21□□□□□ -1.58
LAMA4-207ENST00000424408 MT1HL1P0DM35 61 aa5.15□□□□□ -1.59
LAMA4-207ENST00000424408 ZFHX3Q15911 3703 aa5.14□□□□□ -1.59
LAMA4-207ENST00000424408 ANK3Q12955 4377 aaKnown RBP5.13□□□□□ -1.59
LAMA4-207ENST00000424408 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
LAMA4-207ENST00000424408 SRRM2Q9UQ35 2752 aaKnown RBP5.12□□□□□ -1.59
LAMA4-207ENST00000424408 SMG1Q96Q15 3661 aaKnown RBP5.11□□□□□ -1.59
LAMA4-207ENST00000424408 LORP23490 312 aaPredicted RBP5.11□□□□□ -1.59
LAMA4-207ENST00000424408 MEGF8Q7Z7M0 2845 aa5.11□□□□□ -1.59
LAMA4-207ENST00000424408 DMDP11532 3685 aa5.05□□□□□ -1.6
LAMA4-207ENST00000424408 SVEP1Q4LDE5 3571 aa5.02□□□□□ -1.61
LAMA4-207ENST00000424408 COL7A1Q02388 2944 aa5.02□□□□□ -1.61
LAMA4-207ENST00000424408 CSMD2Q7Z408 3487 aa5□□□□□ -1.61
LAMA4-207ENST00000424408 TRRAPQ9Y4A5 3859 aa4.98□□□□□ -1.61
LAMA4-207ENST00000424408 KRTAP10-4P60372 401 aaPredicted RBP4.96□□□□□ -1.62
LAMA4-207ENST00000424408 ALMS1Q8TCU4 4167 aa4.96□□□□□ -1.62
LAMA4-207ENST00000424408 KRTAP4-5Q9BYR2 181 aa4.96□□□□□ -1.62
LAMA4-207ENST00000424408 CUBNO60494 3623 aa4.95□□□□□ -1.62
LAMA4-207ENST00000424408 MUC3AQ02505 3323 aa4.9□□□□□ -1.63
LAMA4-207ENST00000424408 HUWE1Q7Z6Z7 4374 aaKnown RBP4.9□□□□□ -1.63
LAMA4-207ENST00000424408 SPENQ96T58 3664 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms