RNA–Protein interactions for RNA: ENST00000424248.2

DENND3-202, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene DENND3, Length 4,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-202ENST00000424248 M0R2T5 61 aa8.01□□□□□ -1.13
DENND3-202ENST00000424248 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
DENND3-202ENST00000424248 A0A0A0MQY5 61 aa7.98□□□□□ -1.13
DENND3-202ENST00000424248 ASH1LQ9NR48 2969 aaKnown RBP7.96□□□□□ -1.13
DENND3-202ENST00000424248 ZANQ9Y493 2812 aa7.96□□□□□ -1.14
DENND3-202ENST00000424248 TENM4Q6N022 2769 aa7.95□□□□□ -1.14
DENND3-202ENST00000424248 KRTAP21-3Q3LHN1 58 aa7.94□□□□□ -1.14
DENND3-202ENST00000424248 CELSR2Q9HCU4 2923 aa7.94□□□□□ -1.14
DENND3-202ENST00000424248 EYSQ5T1H1 3165 aa7.92□□□□□ -1.14
DENND3-202ENST00000424248 KRTAP13-2Q52LG2 175 aa7.92□□□□□ -1.14
DENND3-202ENST00000424248 ADM2Q7Z4H4 148 aa7.91□□□□□ -1.14
DENND3-202ENST00000424248 DNAH14Q0VDD8 3507 aa7.9□□□□□ -1.14
DENND3-202ENST00000424248 REV3LO60673 3130 aa7.89□□□□□ -1.15
DENND3-202ENST00000424248 TNRC18O15417 2968 aaPredicted RBP7.89□□□□□ -1.15
DENND3-202ENST00000424248 COL6A3P12111 3177 aa7.89□□□□□ -1.15
DENND3-202ENST00000424248 DCHS2Q6V1P9 2916 aa7.85□□□□□ -1.15
DENND3-202ENST00000424248 M0QZ58 72 aa7.84□□□□□ -1.15
DENND3-202ENST00000424248 HRNRQ86YZ3 2850 aaPredicted RBP7.84□□□□□ -1.15
DENND3-202ENST00000424248 DMXL1Q9Y485 3027 aa7.78□□□□□ -1.16
DENND3-202ENST00000424248 KRTAP16-1A8MUX0 517 aa7.75□□□□□ -1.17
DENND3-202ENST00000424248 CFAP47Q6ZTR5 3102 aa7.74□□□□□ -1.17
DENND3-202ENST00000424248 NF1P21359 2839 aa7.74□□□□□ -1.17
DENND3-202ENST00000424248 CRYBG3Q68DQ2 2970 aa7.71□□□□□ -1.18
DENND3-202ENST00000424248 A8MUU9 505 aa7.7□□□□□ -1.18
DENND3-202ENST00000424248 FBN2P35556 2912 aa7.69□□□□□ -1.18
DENND3-202ENST00000424248 C20orf166-AS1Q96NR2 134 aa7.68□□□□□ -1.18
DENND3-202ENST00000424248 USP34Q70CQ2 3546 aa7.65□□□□□ -1.18
DENND3-202ENST00000424248 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
DENND3-202ENST00000424248 KRTAP1-4P0C5Y4 121 aa7.62□□□□□ -1.19
DENND3-202ENST00000424248 NDUFAF8A1L188 74 aa7.61□□□□□ -1.19
DENND3-202ENST00000424248 LOC400499M0QZD8 3231 aa7.6□□□□□ -1.19
DENND3-202ENST00000424248 SPTBN5Q9NRC6 3674 aaKnown RBP7.6□□□□□ -1.19
DENND3-202ENST00000424248 MXRA5Q9NR99 2828 aa7.57□□□□□ -1.2
DENND3-202ENST00000424248 TENM3Q9P273 2699 aa7.56□□□□□ -1.2
DENND3-202ENST00000424248 SPEGQ15772 3267 aa7.54□□□□□ -1.2
DENND3-202ENST00000424248 H0YAA0 97 aa7.54□□□□□ -1.2
DENND3-202ENST00000424248 TENM1Q9UKZ4 2725 aa7.49□□□□□ -1.21
DENND3-202ENST00000424248 KRTAP13-3Q3SY46 172 aa7.49□□□□□ -1.21
DENND3-202ENST00000424248 CELSR1Q9NYQ6 3014 aa7.44□□□□□ -1.22
DENND3-202ENST00000424248 XP32Q5T750 250 aa7.43□□□□□ -1.22
DENND3-202ENST00000424248 PP632Q6XCG6 107 aa7.4□□□□□ -1.22
DENND3-202ENST00000424248 TPRXLQ17RH7 258 aa7.36□□□□□ -1.23
DENND3-202ENST00000424248 TENM2Q9NT68 2774 aa7.35□□□□□ -1.23
DENND3-202ENST00000424248 TNP1P09430 55 aa7.33□□□□□ -1.24
DENND3-202ENST00000424248 P0C880 135 aa7.32□□□□□ -1.24
DENND3-202ENST00000424248 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
DENND3-202ENST00000424248 PDZD2O15018 2839 aa7.29□□□□□ -1.24
DENND3-202ENST00000424248 TGP01266 2768 aa7.29□□□□□ -1.24
DENND3-202ENST00000424248 MYO15AQ9UKN7 3530 aa7.29□□□□□ -1.24
DENND3-202ENST00000424248 DCHS1Q96JQ0 3298 aa7.23□□□□□ -1.25
DENND3-202ENST00000424248 PKD1L1Q8TDX9 2849 aa7.23□□□□□ -1.25
DENND3-202ENST00000424248 A0A1B0GVY2 172 aa7.19□□□□□ -1.26
DENND3-202ENST00000424248 RELNP78509 3460 aa7.19□□□□□ -1.26
DENND3-202ENST00000424248 KRTAP10-8P60410 259 aa7.19□□□□□ -1.26
DENND3-202ENST00000424248 OTOGQ6ZRI0 2925 aa7.11□□□□□ -1.27
DENND3-202ENST00000424248 WDFY3Q8IZQ1 3526 aa7.08□□□□□ -1.28
DENND3-202ENST00000424248 VWFP04275 2813 aa7.08□□□□□ -1.28
DENND3-202ENST00000424248 FBN1P35555 2871 aaKnown RBP7.07□□□□□ -1.28
DENND3-202ENST00000424248 MUC3AQ02505 3323 aa6.96□□□□□ -1.29
DENND3-202ENST00000424248 KRTAP3-1Q9BYR8 98 aa6.96□□□□□ -1.29
DENND3-202ENST00000424248 KRTAP12-2P59991 146 aa6.95□□□□□ -1.3
DENND3-202ENST00000424248 KRTAP10-10P60014 251 aa6.94□□□□□ -1.3
DENND3-202ENST00000424248 LAMA5O15230 3695 aa6.93□□□□□ -1.3
DENND3-202ENST00000424248 KRTAP12-1P59990 96 aa6.91□□□□□ -1.3
DENND3-202ENST00000424248 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
DENND3-202ENST00000424248 ZFHX4Q86UP3 3567 aa6.85□□□□□ -1.31
DENND3-202ENST00000424248 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
DENND3-202ENST00000424248 ASPMQ8IZT6 3477 aa6.84□□□□□ -1.32
DENND3-202ENST00000424248 FBN3Q75N90 2809 aa6.83□□□□□ -1.32
DENND3-202ENST00000424248 CSMD1Q96PZ7 3565 aa6.82□□□□□ -1.32
DENND3-202ENST00000424248 KRTAP10-6P60371 365 aaPredicted RBP6.82□□□□□ -1.32
DENND3-202ENST00000424248 NBPF19A0A087WUL8 3843 aa6.81□□□□□ -1.32
DENND3-202ENST00000424248 SRRM2Q9UQ35 2752 aaKnown RBP6.79□□□□□ -1.32
DENND3-202ENST00000424248 DMDP11532 3685 aa6.78□□□□□ -1.32
DENND3-202ENST00000424248 ANK3Q12955 4377 aaKnown RBP6.76□□□□□ -1.33
DENND3-202ENST00000424248 MEGF8Q7Z7M0 2845 aa6.74□□□□□ -1.33
DENND3-202ENST00000424248 ZFHX3Q15911 3703 aa6.73□□□□□ -1.33
DENND3-202ENST00000424248 SMG1Q96Q15 3661 aaKnown RBP6.72□□□□□ -1.33
DENND3-202ENST00000424248 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
DENND3-202ENST00000424248 COL7A1Q02388 2944 aa6.62□□□□□ -1.35
DENND3-202ENST00000424248 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
DENND3-202ENST00000424248 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
DENND3-202ENST00000424248 KRTAP3-3Q9BYR6 98 aa6.55□□□□□ -1.36
DENND3-202ENST00000424248 TRRAPQ9Y4A5 3859 aa6.54□□□□□ -1.36
DENND3-202ENST00000424248 CSMD2Q7Z408 3487 aa6.53□□□□□ -1.36
DENND3-202ENST00000424248 KRTAP10-4P60372 401 aaPredicted RBP6.52□□□□□ -1.37
DENND3-202ENST00000424248 SVEP1Q4LDE5 3571 aa6.51□□□□□ -1.37
DENND3-202ENST00000424248 SPENQ96T58 3664 aaKnown RBP6.44□□□□□ -1.38
DENND3-202ENST00000424248 CUBNO60494 3623 aa6.36□□□□□ -1.39
DENND3-202ENST00000424248 BSNQ9UPA5 3926 aa6.36□□□□□ -1.39
DENND3-202ENST00000424248 INE1O15225 51 aa6.35□□□□□ -1.39
DENND3-202ENST00000424248 HUWE1Q7Z6Z7 4374 aaKnown RBP6.34□□□□□ -1.39
DENND3-202ENST00000424248 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
DENND3-202ENST00000424248 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
DENND3-202ENST00000424248 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
DENND3-202ENST00000424248 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
DENND3-202ENST00000424248 DNAH9Q9NYC9 4486 aa6.08□□□□□ -1.44
DENND3-202ENST00000424248 VPS13CQ709C8 3753 aa6.08□□□□□ -1.44
DENND3-202ENST00000424248 DNAH5Q8TE73 4624 aa6.03□□□□□ -1.44
DENND3-202ENST00000424248 KRTAP12-3P60328 96 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms