RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 ITPR2Q14571 2701 aa5.91□□□□□ -1.46
TNC-203ENST00000423613 BAHCC1Q9P281 2608 aa5.9□□□□□ -1.46
TNC-203ENST00000423613 KALRNO60229 2985 aa5.88□□□□□ -1.47
TNC-203ENST00000423613 CRYBG3Q68DQ2 2970 aa5.86□□□□□ -1.47
TNC-203ENST00000423613 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
TNC-203ENST00000423613 ITPR1Q14643 2758 aa5.85□□□□□ -1.47
TNC-203ENST00000423613 CFAP47Q6ZTR5 3102 aa5.85□□□□□ -1.47
TNC-203ENST00000423613 XP32Q5T750 250 aa5.85□□□□□ -1.47
TNC-203ENST00000423613 USP34Q70CQ2 3546 aa5.84□□□□□ -1.47
TNC-203ENST00000423613 VCANP13611 3396 aa5.84□□□□□ -1.47
TNC-203ENST00000423613 REV3LO60673 3130 aa5.84□□□□□ -1.48
TNC-203ENST00000423613 DMXL2Q8TDJ6 3036 aa5.8□□□□□ -1.48
TNC-203ENST00000423613 KRTAP1-4P0C5Y4 121 aa5.8□□□□□ -1.48
TNC-203ENST00000423613 APCP25054 2843 aa5.79□□□□□ -1.48
TNC-203ENST00000423613 LRBAP50851 2863 aa5.78□□□□□ -1.48
TNC-203ENST00000423613 TACC2O95359 2948 aa5.78□□□□□ -1.48
TNC-203ENST00000423613 UTP20O75691 2785 aaKnown RBP5.78□□□□□ -1.48
TNC-203ENST00000423613 SPTBN5Q9NRC6 3674 aaKnown RBP5.77□□□□□ -1.49
TNC-203ENST00000423613 LAMA1P25391 3075 aa5.77□□□□□ -1.49
TNC-203ENST00000423613 HIVEP1P15822 2718 aa5.75□□□□□ -1.49
TNC-203ENST00000423613 ASH1LQ9NR48 2969 aaKnown RBP5.75□□□□□ -1.49
TNC-203ENST00000423613 KMT2BQ9UMN6 2715 aaPredicted RBP5.75□□□□□ -1.49
TNC-203ENST00000423613 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
TNC-203ENST00000423613 SPEGQ15772 3267 aa5.74□□□□□ -1.49
TNC-203ENST00000423613 ATMQ13315 3056 aa5.74□□□□□ -1.49
TNC-203ENST00000423613 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
TNC-203ENST00000423613 BOD1L1Q8NFC6 3051 aa5.71□□□□□ -1.49
TNC-203ENST00000423613 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
TNC-203ENST00000423613 FLNCQ14315 2725 aa5.69□□□□□ -1.5
TNC-203ENST00000423613 COL12A1Q99715 3063 aa5.68□□□□□ -1.5
TNC-203ENST00000423613 NBEAQ8NFP9 2946 aa5.65□□□□□ -1.5
TNC-203ENST00000423613 ADGRG4Q8IZF6 3080 aa5.64□□□□□ -1.51
TNC-203ENST00000423613 FRYLO94915 3013 aa5.63□□□□□ -1.51
TNC-203ENST00000423613 TENM4Q6N022 2769 aa5.61□□□□□ -1.51
TNC-203ENST00000423613 ASPMQ8IZT6 3477 aa5.61□□□□□ -1.51
TNC-203ENST00000423613 NIPBLQ6KC79 2804 aaeCLIP5.6□□□□□ -1.51
TNC-203ENST00000423613 CELSR2Q9HCU4 2923 aa5.58□□□□□ -1.52
TNC-203ENST00000423613 EYSQ5T1H1 3165 aa5.58□□□□□ -1.52
TNC-203ENST00000423613 WDFY3Q8IZQ1 3526 aa5.57□□□□□ -1.52
TNC-203ENST00000423613 KRTAP13-3Q3SY46 172 aa5.57□□□□□ -1.52
TNC-203ENST00000423613 ZZEF1O43149 2961 aa5.55□□□□□ -1.52
TNC-203ENST00000423613 KRTAP13-4Q3LI77 160 aa5.53□□□□□ -1.52
TNC-203ENST00000423613 INE1O15225 51 aa5.51□□□□□ -1.53
TNC-203ENST00000423613 DCHS2Q6V1P9 2916 aa5.51□□□□□ -1.53
TNC-203ENST00000423613 DCHS1Q96JQ0 3298 aa5.48□□□□□ -1.53
TNC-203ENST00000423613 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
TNC-203ENST00000423613 KRTAP12-1P59990 96 aa5.46□□□□□ -1.54
TNC-203ENST00000423613 ZANQ9Y493 2812 aa5.44□□□□□ -1.54
TNC-203ENST00000423613 TNRC18O15417 2968 aaPredicted RBP5.41□□□□□ -1.54
TNC-203ENST00000423613 HRNRQ86YZ3 2850 aaPredicted RBP5.4□□□□□ -1.55
TNC-203ENST00000423613 ZFHX4Q86UP3 3567 aa5.39□□□□□ -1.55
TNC-203ENST00000423613 TENM1Q9UKZ4 2725 aa5.37□□□□□ -1.55
TNC-203ENST00000423613 TGP01266 2768 aa5.36□□□□□ -1.55
TNC-203ENST00000423613 TENM2Q9NT68 2774 aa5.35□□□□□ -1.55
TNC-203ENST00000423613 TENM3Q9P273 2699 aa5.35□□□□□ -1.55
TNC-203ENST00000423613 DMXL1Q9Y485 3027 aa5.34□□□□□ -1.55
TNC-203ENST00000423613 LAMA5O15230 3695 aa5.34□□□□□ -1.55
TNC-203ENST00000423613 FBN2P35556 2912 aa5.34□□□□□ -1.55
TNC-203ENST00000423613 NF1P21359 2839 aa5.33□□□□□ -1.56
TNC-203ENST00000423613 LOC400499M0QZD8 3231 aa5.33□□□□□ -1.56
TNC-203ENST00000423613 CSMD1Q96PZ7 3565 aa5.32□□□□□ -1.56
TNC-203ENST00000423613 CELSR1Q9NYQ6 3014 aa5.29□□□□□ -1.56
TNC-203ENST00000423613 CRCT1Q9UGL9 99 aa5.28□□□□□ -1.56
TNC-203ENST00000423613 NBPF19A0A087WUL8 3843 aa5.27□□□□□ -1.57
TNC-203ENST00000423613 KRTAP3-1Q9BYR8 98 aa5.24□□□□□ -1.57
TNC-203ENST00000423613 RELNP78509 3460 aa5.23□□□□□ -1.57
TNC-203ENST00000423613 DMDP11532 3685 aa5.18□□□□□ -1.58
TNC-203ENST00000423613 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
TNC-203ENST00000423613 VWFP04275 2813 aa5.12□□□□□ -1.59
TNC-203ENST00000423613 MXRA5Q9NR99 2828 aa5.12□□□□□ -1.59
TNC-203ENST00000423613 SMG1Q96Q15 3661 aaKnown RBP5.1□□□□□ -1.59
TNC-203ENST00000423613 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
TNC-203ENST00000423613 SPENQ96T58 3664 aaKnown RBP5.1□□□□□ -1.59
TNC-203ENST00000423613 PDZD2O15018 2839 aa5.09□□□□□ -1.59
TNC-203ENST00000423613 SVEP1Q4LDE5 3571 aa5.06□□□□□ -1.6
TNC-203ENST00000423613 KRTAP10-12P60413 245 aa4.97□□□□□ -1.61
TNC-203ENST00000423613 ZFHX3Q15911 3703 aa4.96□□□□□ -1.62
TNC-203ENST00000423613 CUBNO60494 3623 aa4.95□□□□□ -1.62
TNC-203ENST00000423613 MT1HL1P0DM35 61 aa4.91□□□□□ -1.62
TNC-203ENST00000423613 KRTAP10-5P60370 271 aa4.9□□□□□ -1.62
TNC-203ENST00000423613 KRTAP3-2Q9BYR7 98 aa4.9□□□□□ -1.62
TNC-203ENST00000423613 KRTAP3-3Q9BYR6 98 aa4.89□□□□□ -1.63
TNC-203ENST00000423613 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
TNC-203ENST00000423613 ANK3Q12955 4377 aaKnown RBP4.87□□□□□ -1.63
TNC-203ENST00000423613 FBN3Q75N90 2809 aa4.86□□□□□ -1.63
TNC-203ENST00000423613 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
TNC-203ENST00000423613 KRTAP4-5Q9BYR2 181 aa4.85□□□□□ -1.63
TNC-203ENST00000423613 FBN1P35555 2871 aaKnown RBP4.85□□□□□ -1.63
TNC-203ENST00000423613 CSMD2Q7Z408 3487 aa4.85□□□□□ -1.63
TNC-203ENST00000423613 LCE3AQ5TA76 89 aa4.85□□□□□ -1.63
TNC-203ENST00000423613 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
TNC-203ENST00000423613 MEGF8Q7Z7M0 2845 aa4.82□□□□□ -1.64
TNC-203ENST00000423613 MUC3AQ02505 3323 aa4.81□□□□□ -1.64
TNC-203ENST00000423613 SRRM2Q9UQ35 2752 aaKnown RBP4.81□□□□□ -1.64
TNC-203ENST00000423613 OTOGQ6ZRI0 2925 aa4.8□□□□□ -1.64
TNC-203ENST00000423613 KRTAP8-1Q8IUC2 63 aa4.77□□□□□ -1.65
TNC-203ENST00000423613 TRRAPQ9Y4A5 3859 aa4.75□□□□□ -1.65
TNC-203ENST00000423613 KRTAP10-4P60372 401 aaPredicted RBP4.75□□□□□ -1.65
TNC-203ENST00000423613 VPS13CQ709C8 3753 aa4.73□□□□□ -1.65
TNC-203ENST00000423613 HUWE1Q7Z6Z7 4374 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms