RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 ABCA12Q86UK0 2595 aa1.04□□□□□ -2.24
SSXP9-201ENST00000417503 SONP18583 2426 aaKnown RBP1.04□□□□□ -2.24
SSXP9-201ENST00000417503 DMBT1Q9UGM3 2413 aaPredicted RBP1.03□□□□□ -2.24
SSXP9-201ENST00000417503 PTPN13Q12923 2485 aa1.03□□□□□ -2.25
SSXP9-201ENST00000417503 TNRC18O15417 2968 aaPredicted RBP1.02□□□□□ -2.25
SSXP9-201ENST00000417503 SMR3AQ99954 134 aa1.02□□□□□ -2.25
SSXP9-201ENST00000417503 MUC19Q7Z5P9 8384 aa1.02□□□□□ -2.25
SSXP9-201ENST00000417503 TRANK1O15050 2925 aa1.02□□□□□ -2.25
SSXP9-201ENST00000417503 PRRC2CQ9Y520 2896 aaKnown RBP1.02□□□□□ -2.25
SSXP9-201ENST00000417503 MAP1AP78559 2803 aaPredicted RBP1.01□□□□□ -2.25
SSXP9-201ENST00000417503 CHD6Q8TD26 2715 aa1.01□□□□□ -2.25
SSXP9-201ENST00000417503 ACANP16112 2415 aa1.01□□□□□ -2.25
SSXP9-201ENST00000417503 SRRM2Q9UQ35 2752 aaKnown RBP1.01□□□□□ -2.25
SSXP9-201ENST00000417503 LRRK2Q5S007 2527 aa1□□□□□ -2.25
SSXP9-201ENST00000417503 KRTAP8-1Q8IUC2 63 aa1□□□□□ -2.25
SSXP9-201ENST00000417503 REV3LO60673 3130 aa1□□□□□ -2.25
SSXP9-201ENST00000417503 BDP1A6H8Y1 2624 aa1□□□□□ -2.25
SSXP9-201ENST00000417503 ZZEF1O43149 2961 aa0.99□□□□□ -2.25
SSXP9-201ENST00000417503 SPTAN1Q13813 2472 aaKnown RBP0.99□□□□□ -2.25
SSXP9-201ENST00000417503 CENPEQ02224 2701 aa0.99□□□□□ -2.25
SSXP9-201ENST00000417503 CACNA1AO00555 2505 aa0.99□□□□□ -2.25
SSXP9-201ENST00000417503 CELSR2Q9HCU4 2923 aa0.99□□□□□ -2.25
SSXP9-201ENST00000417503 COL6A3P12111 3177 aa0.99□□□□□ -2.25
SSXP9-201ENST00000417503 HECTD1Q9ULT8 2610 aa0.98□□□□□ -2.25
SSXP9-201ENST00000417503 SRCAPQ6ZRS2 3230 aa0.98□□□□□ -2.25
SSXP9-201ENST00000417503 RIF1Q5UIP0 2472 aaKnown RBP0.98□□□□□ -2.25
SSXP9-201ENST00000417503 ITPR1Q14643 2758 aa0.97□□□□□ -2.25
SSXP9-201ENST00000417503 SETD2Q9BYW2 2564 aaPredicted RBP0.97□□□□□ -2.25
SSXP9-201ENST00000417503 DOPEY1Q5JWR5 2465 aa0.96□□□□□ -2.26
SSXP9-201ENST00000417503 FRYLO94915 3013 aa0.96□□□□□ -2.26
SSXP9-201ENST00000417503 PIEZO1Q92508 2521 aa0.96□□□□□ -2.26
SSXP9-201ENST00000417503 VWFP04275 2813 aa0.96□□□□□ -2.26
SSXP9-201ENST00000417503 CELSR1Q9NYQ6 3014 aa0.95□□□□□ -2.26
SSXP9-201ENST00000417503 OTOGQ6ZRI0 2925 aa0.95□□□□□ -2.26
SSXP9-201ENST00000417503 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
SSXP9-201ENST00000417503 KRTAP5-2Q701N4 177 aa0.95□□□□□ -2.26
SSXP9-201ENST00000417503 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
SSXP9-201ENST00000417503 KRTAP2-1Q9BYU5 128 aa0.95□□□□□ -2.26
SSXP9-201ENST00000417503 TLN1Q9Y490 2541 aaKnown RBP0.95□□□□□ -2.26
SSXP9-201ENST00000417503 MTORP42345 2549 aa0.94□□□□□ -2.26
SSXP9-201ENST00000417503 VPS13AQ96RL7 3174 aa0.94□□□□□ -2.26
SSXP9-201ENST00000417503 USP24Q9UPU5 2620 aa0.94□□□□□ -2.26
SSXP9-201ENST00000417503 PRUNE2Q8WUY3 3088 aa0.94□□□□□ -2.26
SSXP9-201ENST00000417503 ATRQ13535 2644 aa0.93□□□□□ -2.26
SSXP9-201ENST00000417503 EPG5Q9HCE0 2579 aa0.93□□□□□ -2.26
SSXP9-201ENST00000417503 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
SSXP9-201ENST00000417503 CFAP46Q8IYW2 2715 aa0.93□□□□□ -2.26
SSXP9-201ENST00000417503 TGP01266 2768 aa0.92□□□□□ -2.26
SSXP9-201ENST00000417503 FBN3Q75N90 2809 aa0.92□□□□□ -2.26
SSXP9-201ENST00000417503 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
SSXP9-201ENST00000417503 GOLGB1Q14789 3259 aaKnown RBP0.92□□□□□ -2.26
SSXP9-201ENST00000417503 ANK2Q01484 3957 aa0.91□□□□□ -2.26
SSXP9-201ENST00000417503 APCP25054 2843 aa0.91□□□□□ -2.26
SSXP9-201ENST00000417503 NIPBLQ6KC79 2804 aaeCLIP0.91□□□□□ -2.26
SSXP9-201ENST00000417503 MYO9AB2RTY4 2548 aa0.9□□□□□ -2.26
SSXP9-201ENST00000417503 TLN2Q9Y4G6 2542 aa0.9□□□□□ -2.26
SSXP9-201ENST00000417503 CSMD3Q7Z407 3707 aa0.9□□□□□ -2.26
SSXP9-201ENST00000417503 NBEAQ8NFP9 2946 aa0.9□□□□□ -2.26
SSXP9-201ENST00000417503 SETXQ7Z333 2677 aaKnown RBP0.9□□□□□ -2.27
SSXP9-201ENST00000417503 TENM4Q6N022 2769 aa0.9□□□□□ -2.27
SSXP9-201ENST00000417503 CRCT1Q9UGL9 99 aa0.9□□□□□ -2.27
SSXP9-201ENST00000417503 TENM1Q9UKZ4 2725 aa0.89□□□□□ -2.27
SSXP9-201ENST00000417503 WDFY4Q6ZS81 3184 aa0.89□□□□□ -2.27
SSXP9-201ENST00000417503 USP9XQ93008 2570 aaPredicted RBP0.89□□□□□ -2.27
SSXP9-201ENST00000417503 COL7A1Q02388 2944 aa0.89□□□□□ -2.27
SSXP9-201ENST00000417503 AKAP13Q12802 2813 aa0.89□□□□□ -2.27
SSXP9-201ENST00000417503 LRBAP50851 2863 aa0.89□□□□□ -2.27
SSXP9-201ENST00000417503 ITPR3Q14573 2671 aa0.89□□□□□ -2.27
SSXP9-201ENST00000417503 UTRNP46939 3433 aa0.88□□□□□ -2.27
SSXP9-201ENST00000417503 RANBP2P49792 3224 aaKnown RBP0.88□□□□□ -2.27
SSXP9-201ENST00000417503 USP9YO00507 2555 aaPredicted RBP0.88□□□□□ -2.27
SSXP9-201ENST00000417503 DMXL1Q9Y485 3027 aa0.88□□□□□ -2.27
SSXP9-201ENST00000417503 TRIOO75962 3097 aa0.88□□□□□ -2.27
SSXP9-201ENST00000417503 NOTCH1P46531 2555 aa0.88□□□□□ -2.27
SSXP9-201ENST00000417503 UTP20O75691 2785 aaKnown RBP0.87□□□□□ -2.27
SSXP9-201ENST00000417503 FRYQ5TBA9 3013 aa0.87□□□□□ -2.27
SSXP9-201ENST00000417503 CHD8Q9HCK8 2581 aa0.87□□□□□ -2.27
SSXP9-201ENST00000417503 EP400Q96L91 3159 aa0.87□□□□□ -2.27
SSXP9-201ENST00000417503 DNAH12Q6ZR08 3092 aa0.87□□□□□ -2.27
SSXP9-201ENST00000417503 BOD1L1Q8NFC6 3051 aa0.87□□□□□ -2.27
SSXP9-201ENST00000417503 HTTP42858 3142 aa0.86□□□□□ -2.27
SSXP9-201ENST00000417503 UNC79Q9P2D8 2635 aa0.86□□□□□ -2.27
SSXP9-201ENST00000417503 FASNP49327 2511 aaKnown RBP0.86□□□□□ -2.27
SSXP9-201ENST00000417503 CFAP54Q96N23 3096 aa0.86□□□□□ -2.27
SSXP9-201ENST00000417503 SMR3BP02814 79 aaPredicted RBP0.86□□□□□ -2.27
SSXP9-201ENST00000417503 NF1P21359 2839 aa0.86□□□□□ -2.27
SSXP9-201ENST00000417503 KALRNO60229 2985 aa0.86□□□□□ -2.27
SSXP9-201ENST00000417503 FBN2P35556 2912 aa0.85□□□□□ -2.27
SSXP9-201ENST00000417503 MYO18BQ8IUG5 2567 aa0.85□□□□□ -2.27
SSXP9-201ENST00000417503 STAB2Q8WWQ8 2551 aa0.85□□□□□ -2.27
SSXP9-201ENST00000417503 DCHS2Q6V1P9 2916 aa0.85□□□□□ -2.27
SSXP9-201ENST00000417503 COL12A1Q99715 3063 aa0.85□□□□□ -2.27
SSXP9-201ENST00000417503 ZFHX4Q86UP3 3567 aa0.85□□□□□ -2.27
SSXP9-201ENST00000417503 FLNCQ14315 2725 aa0.84□□□□□ -2.27
SSXP9-201ENST00000417503 DCHS1Q96JQ0 3298 aa0.84□□□□□ -2.27
SSXP9-201ENST00000417503 MT1AP04731 61 aa0.84□□□□□ -2.27
SSXP9-201ENST00000417503 SPEGQ15772 3267 aa0.84□□□□□ -2.28
SSXP9-201ENST00000417503 PCNTO95613 3336 aa0.84□□□□□ -2.28
SSXP9-201ENST00000417503 SZT2Q5T011 3432 aa0.83□□□□□ -2.28
SSXP9-201ENST00000417503 LAMA1P25391 3075 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms