RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 H3BUX3 64 aa0.87□□□□□ -2.27
CTDSPL-203ENST00000416688 RYR3Q15413 4870 aa0.87□□□□□ -2.27
CTDSPL-203ENST00000416688 PTPN13Q12923 2485 aa0.86□□□□□ -2.27
CTDSPL-203ENST00000416688 SPART-AS1P0CW21 52 aa0.86□□□□□ -2.27
CTDSPL-203ENST00000416688 ZZEF1O43149 2961 aa0.86□□□□□ -2.27
CTDSPL-203ENST00000416688 SETD2Q9BYW2 2564 aaPredicted RBP0.86□□□□□ -2.27
CTDSPL-203ENST00000416688 COL6A5A8TX70 2615 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 CEP350Q5VT06 3117 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 DEFB108AA8MXU0 73 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 H3BNG1 76 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 KRTAP5-8O75690 187 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 STATHP02808 62 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 KRTAP2-3P0C7H8 128 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 KRTAP2-4Q9BYR9 128 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 KRTAP2-1Q9BYU5 128 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 HIVEP3Q5T1R4 2406 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 TENM2Q9NT68 2774 aa0.85□□□□□ -2.27
CTDSPL-203ENST00000416688 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.27
CTDSPL-203ENST00000416688 PDZD2O15018 2839 aa0.84□□□□□ -2.28
CTDSPL-203ENST00000416688 ACACAQ13085 2346 aa0.84□□□□□ -2.28
CTDSPL-203ENST00000416688 BSNQ9UPA5 3926 aa0.84□□□□□ -2.28
CTDSPL-203ENST00000416688 PRKDCP78527 4128 aaKnown RBP0.84□□□□□ -2.28
CTDSPL-203ENST00000416688 COL12A1Q99715 3063 aa0.84□□□□□ -2.28
CTDSPL-203ENST00000416688 RYR1P21817 5038 aa0.84□□□□□ -2.28
CTDSPL-203ENST00000416688 DMBT1Q9UGM3 2413 aaPredicted RBP0.84□□□□□ -2.28
CTDSPL-203ENST00000416688 DCHS2Q6V1P9 2916 aa0.83□□□□□ -2.28
CTDSPL-203ENST00000416688 EPG5Q9HCE0 2579 aa0.83□□□□□ -2.28
CTDSPL-203ENST00000416688 STAB1Q9NY15 2570 aa0.83□□□□□ -2.28
CTDSPL-203ENST00000416688 PCNTO95613 3336 aa0.83□□□□□ -2.28
CTDSPL-203ENST00000416688 AHNAK2Q8IVF2 5795 aa0.83□□□□□ -2.28
CTDSPL-203ENST00000416688 AHNAKQ09666 5890 aaKnown RBP0.83□□□□□ -2.28
CTDSPL-203ENST00000416688 RANBP2P49792 3224 aaKnown RBP0.83□□□□□ -2.28
CTDSPL-203ENST00000416688 SETXQ7Z333 2677 aaKnown RBP0.82□□□□□ -2.28
CTDSPL-203ENST00000416688 PKD1L1Q8TDX9 2849 aa0.82□□□□□ -2.28
CTDSPL-203ENST00000416688 DNAH11Q96DT5 4516 aa0.82□□□□□ -2.28
CTDSPL-203ENST00000416688 MAST4O15021 2626 aa0.82□□□□□ -2.28
CTDSPL-203ENST00000416688 FLNCQ14315 2725 aa0.81□□□□□ -2.28
CTDSPL-203ENST00000416688 FBN3Q75N90 2809 aa0.81□□□□□ -2.28
CTDSPL-203ENST00000416688 APC2O95996 2303 aa0.81□□□□□ -2.28
CTDSPL-203ENST00000416688 GCN1Q92616 2671 aaKnown RBP0.81□□□□□ -2.28
CTDSPL-203ENST00000416688 RHPN1-AS1Q9BWJ2 59 aa0.81□□□□□ -2.28
CTDSPL-203ENST00000416688 CCDC168Q8NDH2 2452 aa0.81□□□□□ -2.28
CTDSPL-203ENST00000416688 KMT2CQ8NEZ4 4911 aaKnown RBP0.81□□□□□ -2.28
CTDSPL-203ENST00000416688 SYNE2Q8WXH0 6885 aaKnown RBP0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 FAT2Q9NYQ8 4349 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 CFAP54Q96N23 3096 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 RIF1Q5UIP0 2472 aaKnown RBP0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 SPTBN4Q9H254 2564 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 TACC2O95359 2948 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 DEFB110Q30KQ9 67 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 COX14Q96I36 57 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 FAM186AA6NE01 2351 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 EPPK1P58107 5090 aaKnown RBP0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 BIRC6Q9NR09 4857 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 TEP1Q99973 2627 aaKnown RBP0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 ZFHX4Q86UP3 3567 aa0.8□□□□□ -2.28
CTDSPL-203ENST00000416688 DNHD1Q96M86 4753 aa0.79□□□□□ -2.28
CTDSPL-203ENST00000416688 MTORP42345 2549 aa0.79□□□□□ -2.28
CTDSPL-203ENST00000416688 VPS13DQ5THJ4 4388 aa0.79□□□□□ -2.28
CTDSPL-203ENST00000416688 ZFYVE26Q68DK2 2539 aa0.79□□□□□ -2.28
CTDSPL-203ENST00000416688 UTP20O75691 2785 aaKnown RBP0.79□□□□□ -2.28
CTDSPL-203ENST00000416688 TNXBP22105 4242 aa0.78□□□□□ -2.28
CTDSPL-203ENST00000416688 SPENQ96T58 3664 aaKnown RBP0.78□□□□□ -2.28
CTDSPL-203ENST00000416688 HYDINQ4G0P3 5121 aa0.78□□□□□ -2.28
CTDSPL-203ENST00000416688 PRM1P04553 51 aa0.78□□□□□ -2.28
CTDSPL-203ENST00000416688 KRTAP5-7Q6L8G8 165 aa0.78□□□□□ -2.28
CTDSPL-203ENST00000416688 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
CTDSPL-203ENST00000416688 MYCBP2O75592 4640 aa0.78□□□□□ -2.28
CTDSPL-203ENST00000416688 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.29
CTDSPL-203ENST00000416688 RYR2Q92736 4967 aa0.78□□□□□ -2.29
CTDSPL-203ENST00000416688 KMT2AQ03164 3969 aa0.78□□□□□ -2.29
CTDSPL-203ENST00000416688 FRAS1Q86XX4 4008 aa0.78□□□□□ -2.29
CTDSPL-203ENST00000416688 DMXL1Q9Y485 3027 aa0.78□□□□□ -2.29
CTDSPL-203ENST00000416688 LYSTQ99698 3801 aa0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 NSD1Q96L73 2696 aaPredicted RBP0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 HTTP42858 3142 aa0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 NEBP20929 6669 aa0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 KALRNO60229 2985 aa0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 RELNP78509 3460 aa0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 VPS13BQ7Z7G8 4022 aa0.77□□□□□ -2.29
CTDSPL-203ENST00000416688 ABCA13Q86UQ4 5058 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 HERC1Q15751 4861 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 NBPF19A0A087WUL8 3843 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 USP9YO00507 2555 aaPredicted RBP0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 LRRK2Q5S007 2527 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 HMCN1Q96RW7 5635 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 APELAP0DMC3 54 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 FRYLO94915 3013 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 SACSQ9NZJ4 4579 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 HUWE1Q7Z6Z7 4374 aaKnown RBP0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 ACANP16112 2415 aa0.76□□□□□ -2.29
CTDSPL-203ENST00000416688 ITPR3Q14573 2671 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 NOTCH1P46531 2555 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 CEP250Q9BV73 2442 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 CELSR3Q9NYQ7 3312 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 DNAH3Q8TD57 4116 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 DMXL2Q8TDJ6 3036 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 DEFB1P60022 68 aa0.75□□□□□ -2.29
CTDSPL-203ENST00000416688 DNAH8Q96JB1 4490 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms