RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 ZZEF1O43149 2961 aa7.78□□□□□ -1.16
ITGA6-202ENST00000409080 COL6A3P12111 3177 aa7.77□□□□□ -1.17
ITGA6-202ENST00000409080 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
ITGA6-202ENST00000409080 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
ITGA6-202ENST00000409080 ADGRG4Q8IZF6 3080 aa7.74□□□□□ -1.17
ITGA6-202ENST00000409080 LAMA1P25391 3075 aa7.74□□□□□ -1.17
ITGA6-202ENST00000409080 KALRNO60229 2985 aa7.74□□□□□ -1.17
ITGA6-202ENST00000409080 XP32Q5T750 250 aa7.72□□□□□ -1.17
ITGA6-202ENST00000409080 SPATA8Q6RVD6 105 aa7.72□□□□□ -1.17
ITGA6-202ENST00000409080 BOD1L1Q8NFC6 3051 aa7.72□□□□□ -1.17
ITGA6-202ENST00000409080 A0A1B0GVY2 172 aa7.67□□□□□ -1.18
ITGA6-202ENST00000409080 CELSR2Q9HCU4 2923 aa7.66□□□□□ -1.18
ITGA6-202ENST00000409080 CELSR3Q9NYQ7 3312 aa7.66□□□□□ -1.18
ITGA6-202ENST00000409080 DMXL1Q9Y485 3027 aa7.64□□□□□ -1.19
ITGA6-202ENST00000409080 ZANQ9Y493 2812 aa7.64□□□□□ -1.19
ITGA6-202ENST00000409080 DCHS2Q6V1P9 2916 aa7.63□□□□□ -1.19
ITGA6-202ENST00000409080 VCANP13611 3396 aa7.6□□□□□ -1.19
ITGA6-202ENST00000409080 HRNRQ86YZ3 2850 aaPredicted RBP7.59□□□□□ -1.19
ITGA6-202ENST00000409080 NF1P21359 2839 aa7.58□□□□□ -1.2
ITGA6-202ENST00000409080 USP34Q70CQ2 3546 aa7.55□□□□□ -1.2
ITGA6-202ENST00000409080 ASH1LQ9NR48 2969 aaKnown RBP7.54□□□□□ -1.2
ITGA6-202ENST00000409080 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
ITGA6-202ENST00000409080 KRTAP13-3Q3SY46 172 aa7.53□□□□□ -1.2
ITGA6-202ENST00000409080 TENM1Q9UKZ4 2725 aa7.51□□□□□ -1.21
ITGA6-202ENST00000409080 MXRA5Q9NR99 2828 aa7.51□□□□□ -1.21
ITGA6-202ENST00000409080 TENM2Q9NT68 2774 aa7.51□□□□□ -1.21
ITGA6-202ENST00000409080 FREM2Q5SZK8 3169 aa7.51□□□□□ -1.21
ITGA6-202ENST00000409080 TNP1P09430 55 aa7.5□□□□□ -1.21
ITGA6-202ENST00000409080 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
ITGA6-202ENST00000409080 TENM3Q9P273 2699 aa7.48□□□□□ -1.21
ITGA6-202ENST00000409080 SPTBN5Q9NRC6 3674 aaKnown RBP7.46□□□□□ -1.21
ITGA6-202ENST00000409080 A8MU10 97 aa7.45□□□□□ -1.22
ITGA6-202ENST00000409080 A0A0A0MQY5 61 aa7.43□□□□□ -1.22
ITGA6-202ENST00000409080 KRTAP10-10P60014 251 aa7.42□□□□□ -1.22
ITGA6-202ENST00000409080 DNAH14Q0VDD8 3507 aa7.38□□□□□ -1.23
ITGA6-202ENST00000409080 CFAP47Q6ZTR5 3102 aa7.37□□□□□ -1.23
ITGA6-202ENST00000409080 KRTAP16-1A8MUX0 517 aa7.37□□□□□ -1.23
ITGA6-202ENST00000409080 PDZD2O15018 2839 aa7.36□□□□□ -1.23
ITGA6-202ENST00000409080 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
ITGA6-202ENST00000409080 FBN2P35556 2912 aa7.34□□□□□ -1.23
ITGA6-202ENST00000409080 CELSR1Q9NYQ6 3014 aa7.26□□□□□ -1.25
ITGA6-202ENST00000409080 PP632Q6XCG6 107 aa7.24□□□□□ -1.25
ITGA6-202ENST00000409080 SPEGQ15772 3267 aa7.24□□□□□ -1.25
ITGA6-202ENST00000409080 KRTAP25-1Q3LHN0 102 aa7.23□□□□□ -1.25
ITGA6-202ENST00000409080 LOC400499M0QZD8 3231 aa7.19□□□□□ -1.26
ITGA6-202ENST00000409080 PKD1L1Q8TDX9 2849 aa7.18□□□□□ -1.26
ITGA6-202ENST00000409080 OTOGQ6ZRI0 2925 aa7.17□□□□□ -1.26
ITGA6-202ENST00000409080 A6NN06 94 aa7.14□□□□□ -1.27
ITGA6-202ENST00000409080 TGP01266 2768 aa7.07□□□□□ -1.28
ITGA6-202ENST00000409080 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
ITGA6-202ENST00000409080 P0C880 135 aa7.02□□□□□ -1.29
ITGA6-202ENST00000409080 VWFP04275 2813 aa7.01□□□□□ -1.29
ITGA6-202ENST00000409080 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
ITGA6-202ENST00000409080 H0YAA0 97 aa6.98□□□□□ -1.29
ITGA6-202ENST00000409080 NBPF19A0A087WUL8 3843 aa6.95□□□□□ -1.3
ITGA6-202ENST00000409080 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
ITGA6-202ENST00000409080 RELNP78509 3460 aa6.92□□□□□ -1.3
ITGA6-202ENST00000409080 MYO15AQ9UKN7 3530 aa6.91□□□□□ -1.3
ITGA6-202ENST00000409080 FBN1P35555 2871 aaKnown RBP6.9□□□□□ -1.31
ITGA6-202ENST00000409080 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
ITGA6-202ENST00000409080 H3BS24 57 aa6.82□□□□□ -1.32
ITGA6-202ENST00000409080 WDFY3Q8IZQ1 3526 aa6.81□□□□□ -1.32
ITGA6-202ENST00000409080 ZFHX3Q15911 3703 aa6.78□□□□□ -1.32
ITGA6-202ENST00000409080 NDUFAF8A1L188 74 aa6.73□□□□□ -1.33
ITGA6-202ENST00000409080 FBN3Q75N90 2809 aa6.71□□□□□ -1.34
ITGA6-202ENST00000409080 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
ITGA6-202ENST00000409080 KRTAP10-4P60372 401 aaPredicted RBP6.69□□□□□ -1.34
ITGA6-202ENST00000409080 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
ITGA6-202ENST00000409080 KRTAP3-1Q9BYR8 98 aa6.67□□□□□ -1.34
ITGA6-202ENST00000409080 LAMA5O15230 3695 aa6.66□□□□□ -1.34
ITGA6-202ENST00000409080 ASPMQ8IZT6 3477 aa6.65□□□□□ -1.34
ITGA6-202ENST00000409080 KRTAP12-2P59991 146 aa6.65□□□□□ -1.35
ITGA6-202ENST00000409080 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
ITGA6-202ENST00000409080 ALMS1Q8TCU4 4167 aa6.62□□□□□ -1.35
ITGA6-202ENST00000409080 KRTAP12-1P59990 96 aa6.59□□□□□ -1.35
ITGA6-202ENST00000409080 MEGF8Q7Z7M0 2845 aa6.58□□□□□ -1.36
ITGA6-202ENST00000409080 HUWE1Q7Z6Z7 4374 aaKnown RBP6.51□□□□□ -1.37
ITGA6-202ENST00000409080 MUC3AQ02505 3323 aa6.45□□□□□ -1.38
ITGA6-202ENST00000409080 ZFHX4Q86UP3 3567 aa6.45□□□□□ -1.38
ITGA6-202ENST00000409080 DMDP11532 3685 aa6.44□□□□□ -1.38
ITGA6-202ENST00000409080 TRRAPQ9Y4A5 3859 aa6.44□□□□□ -1.38
ITGA6-202ENST00000409080 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
ITGA6-202ENST00000409080 COL7A1Q02388 2944 aa6.42□□□□□ -1.38
ITGA6-202ENST00000409080 CSMD1Q96PZ7 3565 aa6.4□□□□□ -1.39
ITGA6-202ENST00000409080 KRTAP15-1Q3LI76 137 aa6.4□□□□□ -1.39
ITGA6-202ENST00000409080 SMG1Q96Q15 3661 aaKnown RBP6.39□□□□□ -1.39
ITGA6-202ENST00000409080 CSMD2Q7Z408 3487 aa6.37□□□□□ -1.39
ITGA6-202ENST00000409080 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
ITGA6-202ENST00000409080 KRTAP3-3Q9BYR6 98 aa6.28□□□□□ -1.4
ITGA6-202ENST00000409080 DNAH9Q9NYC9 4486 aa6.26□□□□□ -1.41
ITGA6-202ENST00000409080 SPENQ96T58 3664 aaKnown RBP6.24□□□□□ -1.41
ITGA6-202ENST00000409080 KRTAP3-2Q9BYR7 98 aa6.22□□□□□ -1.41
ITGA6-202ENST00000409080 BSNQ9UPA5 3926 aa6.22□□□□□ -1.41
ITGA6-202ENST00000409080 DNAH1Q9P2D7 4330 aa6.19□□□□□ -1.42
ITGA6-202ENST00000409080 CUBNO60494 3623 aa6.18□□□□□ -1.42
ITGA6-202ENST00000409080 DNAH11Q96DT5 4516 aa6.16□□□□□ -1.42
ITGA6-202ENST00000409080 DNAH5Q8TE73 4624 aa6.14□□□□□ -1.43
ITGA6-202ENST00000409080 DNAH10Q8IVF4 4471 aa6.12□□□□□ -1.43
ITGA6-202ENST00000409080 SVEP1Q4LDE5 3571 aa6.05□□□□□ -1.44
ITGA6-202ENST00000409080 KRTAP23-1A1A580 65 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms