RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 WDFY4Q6ZS81 3184 aa5.22□□□□□ -1.57
LTBP1-204ENST00000407925 LAMA1P25391 3075 aa5.22□□□□□ -1.57
LTBP1-204ENST00000407925 PCNTO95613 3336 aa5.22□□□□□ -1.57
LTBP1-204ENST00000407925 KRTAP12-1P59990 96 aa5.21□□□□□ -1.58
LTBP1-204ENST00000407925 TENM1Q9UKZ4 2725 aa5.19□□□□□ -1.58
LTBP1-204ENST00000407925 LRBAP50851 2863 aa5.19□□□□□ -1.58
LTBP1-204ENST00000407925 ASH1LQ9NR48 2969 aaKnown RBP5.16□□□□□ -1.58
LTBP1-204ENST00000407925 CELSR2Q9HCU4 2923 aa5.15□□□□□ -1.58
LTBP1-204ENST00000407925 KALRNO60229 2985 aa5.15□□□□□ -1.58
LTBP1-204ENST00000407925 TGP01266 2768 aa5.15□□□□□ -1.59
LTBP1-204ENST00000407925 PRUNE2Q8WUY3 3088 aa5.14□□□□□ -1.59
LTBP1-204ENST00000407925 REV3LO60673 3130 aa5.13□□□□□ -1.59
LTBP1-204ENST00000407925 RANBP2P49792 3224 aaKnown RBP5.13□□□□□ -1.59
LTBP1-204ENST00000407925 HTTP42858 3142 aa5.12□□□□□ -1.59
LTBP1-204ENST00000407925 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
LTBP1-204ENST00000407925 DMXL2Q8TDJ6 3036 aa5.11□□□□□ -1.59
LTBP1-204ENST00000407925 DCHS2Q6V1P9 2916 aa5.11□□□□□ -1.59
LTBP1-204ENST00000407925 ATMQ13315 3056 aa5.08□□□□□ -1.6
LTBP1-204ENST00000407925 COL12A1Q99715 3063 aa5.07□□□□□ -1.6
LTBP1-204ENST00000407925 TENM2Q9NT68 2774 aa5.07□□□□□ -1.6
LTBP1-204ENST00000407925 CRYBG3Q68DQ2 2970 aa5.07□□□□□ -1.6
LTBP1-204ENST00000407925 NF1P21359 2839 aa5.07□□□□□ -1.6
LTBP1-204ENST00000407925 KRTAP3-1Q9BYR8 98 aa5.06□□□□□ -1.6
LTBP1-204ENST00000407925 LAMA2P24043 3122 aaKnown RBP5.05□□□□□ -1.6
LTBP1-204ENST00000407925 INE1O15225 51 aa5.04□□□□□ -1.6
LTBP1-204ENST00000407925 TRIOO75962 3097 aa5.04□□□□□ -1.6
LTBP1-204ENST00000407925 FRYLO94915 3013 aa5□□□□□ -1.61
LTBP1-204ENST00000407925 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
LTBP1-204ENST00000407925 VPS13AQ96RL7 3174 aa4.98□□□□□ -1.61
LTBP1-204ENST00000407925 PDZD2O15018 2839 aa4.98□□□□□ -1.61
LTBP1-204ENST00000407925 ZZEF1O43149 2961 aa4.97□□□□□ -1.61
LTBP1-204ENST00000407925 ZANQ9Y493 2812 aa4.93□□□□□ -1.62
LTBP1-204ENST00000407925 ADGRG4Q8IZF6 3080 aa4.91□□□□□ -1.62
LTBP1-204ENST00000407925 LAMA3Q16787 3333 aa4.9□□□□□ -1.62
LTBP1-204ENST00000407925 FREM2Q5SZK8 3169 aa4.88□□□□□ -1.63
LTBP1-204ENST00000407925 UNC80Q8N2C7 3258 aa4.88□□□□□ -1.63
LTBP1-204ENST00000407925 BRCA2P51587 3418 aa4.88□□□□□ -1.63
LTBP1-204ENST00000407925 KRTAP23-1A1A580 65 aa4.87□□□□□ -1.63
LTBP1-204ENST00000407925 KRTAP10-12P60413 245 aa4.86□□□□□ -1.63
LTBP1-204ENST00000407925 MKI67P46013 3256 aaKnown RBP4.86□□□□□ -1.63
LTBP1-204ENST00000407925 NBEAQ8NFP9 2946 aa4.85□□□□□ -1.63
LTBP1-204ENST00000407925 EYSQ5T1H1 3165 aa4.84□□□□□ -1.64
LTBP1-204ENST00000407925 MXRA5Q9NR99 2828 aa4.83□□□□□ -1.64
LTBP1-204ENST00000407925 XIRP2A4UGR9 3374 aa4.82□□□□□ -1.64
LTBP1-204ENST00000407925 PKD1L1Q8TDX9 2849 aa4.8□□□□□ -1.64
LTBP1-204ENST00000407925 TNRC18O15417 2968 aaPredicted RBP4.8□□□□□ -1.64
LTBP1-204ENST00000407925 BOD1L1Q8NFC6 3051 aa4.8□□□□□ -1.64
LTBP1-204ENST00000407925 MT1HL1P0DM35 61 aa4.79□□□□□ -1.64
LTBP1-204ENST00000407925 CELSR1Q9NYQ6 3014 aa4.79□□□□□ -1.64
LTBP1-204ENST00000407925 HRNRQ86YZ3 2850 aaPredicted RBP4.78□□□□□ -1.64
LTBP1-204ENST00000407925 KRTAP3-2Q9BYR7 98 aa4.77□□□□□ -1.65
LTBP1-204ENST00000407925 FBN2P35556 2912 aa4.76□□□□□ -1.65
LTBP1-204ENST00000407925 KRTAP12-3P60328 96 aa4.73□□□□□ -1.65
LTBP1-204ENST00000407925 KRTAP3-3Q9BYR6 98 aa4.73□□□□□ -1.65
LTBP1-204ENST00000407925 VWFP04275 2813 aa4.71□□□□□ -1.65
LTBP1-204ENST00000407925 FBN3Q75N90 2809 aa4.69□□□□□ -1.66
LTBP1-204ENST00000407925 DNAH14Q0VDD8 3507 aa4.69□□□□□ -1.66
LTBP1-204ENST00000407925 CDH23Q9H251 3354 aa4.68□□□□□ -1.66
LTBP1-204ENST00000407925 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
LTBP1-204ENST00000407925 VCANP13611 3396 aa4.64□□□□□ -1.67
LTBP1-204ENST00000407925 CELSR3Q9NYQ7 3312 aa4.63□□□□□ -1.67
LTBP1-204ENST00000407925 DMXL1Q9Y485 3027 aa4.6□□□□□ -1.67
LTBP1-204ENST00000407925 USP34Q70CQ2 3546 aa4.59□□□□□ -1.67
LTBP1-204ENST00000407925 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
LTBP1-204ENST00000407925 CFAP47Q6ZTR5 3102 aa4.59□□□□□ -1.67
LTBP1-204ENST00000407925 SRRM2Q9UQ35 2752 aaKnown RBP4.58□□□□□ -1.68
LTBP1-204ENST00000407925 COL6A3P12111 3177 aa4.57□□□□□ -1.68
LTBP1-204ENST00000407925 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
LTBP1-204ENST00000407925 SPEGQ15772 3267 aa4.54□□□□□ -1.68
LTBP1-204ENST00000407925 MEGF8Q7Z7M0 2845 aa4.53□□□□□ -1.68
LTBP1-204ENST00000407925 SZT2Q5T011 3432 aa4.53□□□□□ -1.68
LTBP1-204ENST00000407925 KRTAP8-1Q8IUC2 63 aa4.47□□□□□ -1.69
LTBP1-204ENST00000407925 MYO15AQ9UKN7 3530 aa4.47□□□□□ -1.69
LTBP1-204ENST00000407925 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
LTBP1-204ENST00000407925 SPTBN5Q9NRC6 3674 aaKnown RBP4.42□□□□□ -1.7
LTBP1-204ENST00000407925 COL7A1Q02388 2944 aa4.41□□□□□ -1.7
LTBP1-204ENST00000407925 KRTAP4-5Q9BYR2 181 aa4.41□□□□□ -1.7
LTBP1-204ENST00000407925 KRTAP19-4Q3LI73 84 aa4.36□□□□□ -1.71
LTBP1-204ENST00000407925 LORP23490 312 aaPredicted RBP4.35□□□□□ -1.71
LTBP1-204ENST00000407925 FBN1P35555 2871 aaKnown RBP4.35□□□□□ -1.71
LTBP1-204ENST00000407925 OTOGQ6ZRI0 2925 aa4.35□□□□□ -1.71
LTBP1-204ENST00000407925 WDFY3Q8IZQ1 3526 aa4.34□□□□□ -1.72
LTBP1-204ENST00000407925 HUWE1Q7Z6Z7 4374 aaKnown RBP4.29□□□□□ -1.72
LTBP1-204ENST00000407925 MUC3AQ02505 3323 aa4.28□□□□□ -1.72
LTBP1-204ENST00000407925 DCHS1Q96JQ0 3298 aa4.26□□□□□ -1.73
LTBP1-204ENST00000407925 SPRR2GQ9BYE4 73 aa4.25□□□□□ -1.73
LTBP1-204ENST00000407925 SPENQ96T58 3664 aaKnown RBP4.21□□□□□ -1.74
LTBP1-204ENST00000407925 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
LTBP1-204ENST00000407925 ALMS1Q8TCU4 4167 aa4.19□□□□□ -1.74
LTBP1-204ENST00000407925 MT1HP80294 61 aa4.19□□□□□ -1.74
LTBP1-204ENST00000407925 ANK3Q12955 4377 aaKnown RBP4.18□□□□□ -1.74
LTBP1-204ENST00000407925 LOC400499M0QZD8 3231 aa4.18□□□□□ -1.74
LTBP1-204ENST00000407925 ASPMQ8IZT6 3477 aa4.17□□□□□ -1.74
LTBP1-204ENST00000407925 MT2AP02795 61 aa4.17□□□□□ -1.74
LTBP1-204ENST00000407925 DMDP11532 3685 aa4.15□□□□□ -1.75
LTBP1-204ENST00000407925 ZFHX4Q86UP3 3567 aa4.14□□□□□ -1.75
LTBP1-204ENST00000407925 CSMD1Q96PZ7 3565 aa4.12□□□□□ -1.75
LTBP1-204ENST00000407925 LCE3CQ5T5A8 94 aa4.1□□□□□ -1.75
LTBP1-204ENST00000407925 BSNQ9UPA5 3926 aa4.09□□□□□ -1.75
LTBP1-204ENST00000407925 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms