RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-222ENST00000406454 DMDP11532 3685 aa7.53□□□□□ -1.2
CACNA1C-222ENST00000406454 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
CACNA1C-222ENST00000406454 ITPR1Q14643 2758 aa7.52□□□□□ -1.21
CACNA1C-222ENST00000406454 NSD1Q96L73 2696 aaPredicted RBP7.52□□□□□ -1.21
CACNA1C-222ENST00000406454 FRYLO94915 3013 aa7.51□□□□□ -1.21
CACNA1C-222ENST00000406454 ATMQ13315 3056 aa7.47□□□□□ -1.21
CACNA1C-222ENST00000406454 FLNCQ14315 2725 aa7.45□□□□□ -1.22
CACNA1C-222ENST00000406454 ITPR2Q14571 2701 aa7.44□□□□□ -1.22
CACNA1C-222ENST00000406454 ZFHX4Q86UP3 3567 aa7.43□□□□□ -1.22
CACNA1C-222ENST00000406454 KRTAP21-3Q3LHN1 58 aa7.42□□□□□ -1.22
CACNA1C-222ENST00000406454 CFAP47Q6ZTR5 3102 aa7.41□□□□□ -1.22
CACNA1C-222ENST00000406454 TACC2O95359 2948 aa7.41□□□□□ -1.22
CACNA1C-222ENST00000406454 COL12A1Q99715 3063 aa7.38□□□□□ -1.23
CACNA1C-222ENST00000406454 KALRNO60229 2985 aa7.36□□□□□ -1.23
CACNA1C-222ENST00000406454 HIVEP1P15822 2718 aa7.36□□□□□ -1.23
CACNA1C-222ENST00000406454 A8MU10 97 aa7.35□□□□□ -1.23
CACNA1C-222ENST00000406454 RELNP78509 3460 aa7.35□□□□□ -1.23
CACNA1C-222ENST00000406454 BOD1L1Q8NFC6 3051 aa7.33□□□□□ -1.24
CACNA1C-222ENST00000406454 A8MUU9 505 aa7.32□□□□□ -1.24
CACNA1C-222ENST00000406454 A6NN06 94 aa7.32□□□□□ -1.24
CACNA1C-222ENST00000406454 CSMD1Q96PZ7 3565 aa7.32□□□□□ -1.24
CACNA1C-222ENST00000406454 SPENQ96T58 3664 aaKnown RBP7.31□□□□□ -1.24
CACNA1C-222ENST00000406454 ADGRG4Q8IZF6 3080 aa7.31□□□□□ -1.24
CACNA1C-222ENST00000406454 UTP20O75691 2785 aaKnown RBP7.28□□□□□ -1.24
CACNA1C-222ENST00000406454 ZFHX3Q15911 3703 aa7.28□□□□□ -1.24
CACNA1C-222ENST00000406454 KRTAP25-1Q3LHN0 102 aa7.28□□□□□ -1.24
CACNA1C-222ENST00000406454 LOC400499M0QZD8 3231 aa7.27□□□□□ -1.25
CACNA1C-222ENST00000406454 TNP1P09430 55 aa7.26□□□□□ -1.25
CACNA1C-222ENST00000406454 LRBAP50851 2863 aa7.26□□□□□ -1.25
CACNA1C-222ENST00000406454 NBEAQ8NFP9 2946 aa7.25□□□□□ -1.25
CACNA1C-222ENST00000406454 KRTAP1-4P0C5Y4 121 aa7.25□□□□□ -1.25
CACNA1C-222ENST00000406454 NIPBLQ6KC79 2804 aaeCLIP7.24□□□□□ -1.25
CACNA1C-222ENST00000406454 DMXL2Q8TDJ6 3036 aa7.23□□□□□ -1.25
CACNA1C-222ENST00000406454 APCP25054 2843 aa7.23□□□□□ -1.25
CACNA1C-222ENST00000406454 NBPF19A0A087WUL8 3843 aa7.22□□□□□ -1.25
CACNA1C-222ENST00000406454 KMT2BQ9UMN6 2715 aaPredicted RBP7.22□□□□□ -1.25
CACNA1C-222ENST00000406454 CRYBG3Q68DQ2 2970 aa7.21□□□□□ -1.26
CACNA1C-222ENST00000406454 TENM4Q6N022 2769 aa7.21□□□□□ -1.26
CACNA1C-222ENST00000406454 ASH1LQ9NR48 2969 aaKnown RBP7.17□□□□□ -1.26
CACNA1C-222ENST00000406454 TNRC18O15417 2968 aaPredicted RBP7.15□□□□□ -1.26
CACNA1C-222ENST00000406454 SMG1Q96Q15 3661 aaKnown RBP7.15□□□□□ -1.27
CACNA1C-222ENST00000406454 ZZEF1O43149 2961 aa7.12□□□□□ -1.27
CACNA1C-222ENST00000406454 XP32Q5T750 250 aa7.12□□□□□ -1.27
CACNA1C-222ENST00000406454 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
CACNA1C-222ENST00000406454 KRTAP10-8P60410 259 aa7.08□□□□□ -1.28
CACNA1C-222ENST00000406454 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
CACNA1C-222ENST00000406454 ZANQ9Y493 2812 aa7.05□□□□□ -1.28
CACNA1C-222ENST00000406454 DMXL1Q9Y485 3027 aa7.05□□□□□ -1.28
CACNA1C-222ENST00000406454 DCHS2Q6V1P9 2916 aa7.03□□□□□ -1.28
CACNA1C-222ENST00000406454 HRNRQ86YZ3 2850 aaPredicted RBP7.03□□□□□ -1.28
CACNA1C-222ENST00000406454 SVEP1Q4LDE5 3571 aa7.01□□□□□ -1.29
CACNA1C-222ENST00000406454 MUC3AQ02505 3323 aa6.99□□□□□ -1.29
CACNA1C-222ENST00000406454 TPRXLQ17RH7 258 aa6.98□□□□□ -1.29
CACNA1C-222ENST00000406454 BSNQ9UPA5 3926 aa6.98□□□□□ -1.29
CACNA1C-222ENST00000406454 VPS13CQ709C8 3753 aa6.95□□□□□ -1.3
CACNA1C-222ENST00000406454 H0YAA0 97 aa6.91□□□□□ -1.3
CACNA1C-222ENST00000406454 KRTAP13-3Q3SY46 172 aa6.9□□□□□ -1.3
CACNA1C-222ENST00000406454 A0A1B0GVY2 172 aa6.88□□□□□ -1.31
CACNA1C-222ENST00000406454 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.31
CACNA1C-222ENST00000406454 FBN2P35556 2912 aa6.83□□□□□ -1.32
CACNA1C-222ENST00000406454 NF1P21359 2839 aa6.82□□□□□ -1.32
CACNA1C-222ENST00000406454 CUBNO60494 3623 aa6.8□□□□□ -1.32
CACNA1C-222ENST00000406454 TENM2Q9NT68 2774 aa6.79□□□□□ -1.32
CACNA1C-222ENST00000406454 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
CACNA1C-222ENST00000406454 TENM3Q9P273 2699 aa6.73□□□□□ -1.33
CACNA1C-222ENST00000406454 KRTAP10-10P60014 251 aa6.72□□□□□ -1.33
CACNA1C-222ENST00000406454 TENM1Q9UKZ4 2725 aa6.72□□□□□ -1.33
CACNA1C-222ENST00000406454 MXRA5Q9NR99 2828 aa6.69□□□□□ -1.34
CACNA1C-222ENST00000406454 CELSR1Q9NYQ6 3014 aa6.64□□□□□ -1.35
CACNA1C-222ENST00000406454 PDZD2O15018 2839 aa6.6□□□□□ -1.35
CACNA1C-222ENST00000406454 AKAP9Q99996 3911 aa6.58□□□□□ -1.36
CACNA1C-222ENST00000406454 PKD1L1Q8TDX9 2849 aa6.58□□□□□ -1.36
CACNA1C-222ENST00000406454 TGP01266 2768 aa6.57□□□□□ -1.36
CACNA1C-222ENST00000406454 KRTAP12-2P59991 146 aa6.5□□□□□ -1.37
CACNA1C-222ENST00000406454 KRTAP3-1Q9BYR8 98 aa6.49□□□□□ -1.37
CACNA1C-222ENST00000406454 VWFP04275 2813 aa6.47□□□□□ -1.37
CACNA1C-222ENST00000406454 OTOGQ6ZRI0 2925 aa6.43□□□□□ -1.38
CACNA1C-222ENST00000406454 KRTAP12-1P59990 96 aa6.41□□□□□ -1.38
CACNA1C-222ENST00000406454 ZNF469Q96JG9 3925 aaPredicted RBP6.38□□□□□ -1.39
CACNA1C-222ENST00000406454 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
CACNA1C-222ENST00000406454 ANK3Q12955 4377 aaKnown RBP6.34□□□□□ -1.4
CACNA1C-222ENST00000406454 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
CACNA1C-222ENST00000406454 FBN1P35555 2871 aaKnown RBP6.29□□□□□ -1.4
CACNA1C-222ENST00000406454 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
CACNA1C-222ENST00000406454 MT1HL1P0DM35 61 aa6.26□□□□□ -1.41
CACNA1C-222ENST00000406454 KRTAP15-1Q3LI76 137 aa6.25□□□□□ -1.41
CACNA1C-222ENST00000406454 TRRAPQ9Y4A5 3859 aa6.23□□□□□ -1.41
CACNA1C-222ENST00000406454 CSMD3Q7Z407 3707 aa6.23□□□□□ -1.41
CACNA1C-222ENST00000406454 SRRM2Q9UQ35 2752 aaKnown RBP6.21□□□□□ -1.42
CACNA1C-222ENST00000406454 KRTAP10-4P60372 401 aaPredicted RBP6.15□□□□□ -1.43
CACNA1C-222ENST00000406454 FBN3Q75N90 2809 aa6.13□□□□□ -1.43
CACNA1C-222ENST00000406454 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
CACNA1C-222ENST00000406454 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
CACNA1C-222ENST00000406454 MEGF8Q7Z7M0 2845 aa6.04□□□□□ -1.44
CACNA1C-222ENST00000406454 INE1O15225 51 aa6.04□□□□□ -1.44
CACNA1C-222ENST00000406454 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
CACNA1C-222ENST00000406454 HUWE1Q7Z6Z7 4374 aaKnown RBP5.96□□□□□ -1.45
CACNA1C-222ENST00000406454 COL7A1Q02388 2944 aa5.89□□□□□ -1.47
CACNA1C-222ENST00000406454 CMYA5Q8N3K9 4069 aa5.89□□□□□ -1.47
CACNA1C-222ENST00000406454 FRAS1Q86XX4 4008 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms