RNA–Protein interactions for RNA: ENST00000406396.7

KDSR-202, Transcript of 3-ketodihydrosphingosine reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDSR, Length 5,447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDSR-202ENST00000406396 KMT2BQ9UMN6 2715 aaPredicted RBP9.82□□□□□ -0.84
KDSR-202ENST00000406396 UTP20O75691 2785 aaKnown RBP9.82□□□□□ -0.84
KDSR-202ENST00000406396 A8MU10 97 aa9.8□□□□□ -0.84
KDSR-202ENST00000406396 REV3LO60673 3130 aa9.79□□□□□ -0.84
KDSR-202ENST00000406396 RPS29P62273 56 aaKnown RBP9.79□□□□□ -0.84
KDSR-202ENST00000406396 KRTAP13-1Q8IUC0 172 aa9.78□□□□□ -0.84
KDSR-202ENST00000406396 CFAP47Q6ZTR5 3102 aa9.77□□□□□ -0.85
KDSR-202ENST00000406396 KRTAP13-2Q52LG2 175 aa9.76□□□□□ -0.85
KDSR-202ENST00000406396 KRTAP25-1Q3LHN0 102 aa9.76□□□□□ -0.85
KDSR-202ENST00000406396 HIVEP1P15822 2718 aa9.75□□□□□ -0.85
KDSR-202ENST00000406396 PLAC4Q8WY50 150 aa9.75□□□□□ -0.85
KDSR-202ENST00000406396 ZZEF1O43149 2961 aa9.72□□□□□ -0.85
KDSR-202ENST00000406396 SPEGQ15772 3267 aa9.71□□□□□ -0.85
KDSR-202ENST00000406396 APCP25054 2843 aa9.69□□□□□ -0.86
KDSR-202ENST00000406396 SPTBN5Q9NRC6 3674 aaKnown RBP9.69□□□□□ -0.86
KDSR-202ENST00000406396 EYSQ5T1H1 3165 aa9.69□□□□□ -0.86
KDSR-202ENST00000406396 A8MUU9 505 aa9.65□□□□□ -0.86
KDSR-202ENST00000406396 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.87
KDSR-202ENST00000406396 NIPBLQ6KC79 2804 aaeCLIP9.59□□□□□ -0.87
KDSR-202ENST00000406396 ZANQ9Y493 2812 aa9.58□□□□□ -0.88
KDSR-202ENST00000406396 KRTAP16-1A8MUX0 517 aa9.57□□□□□ -0.88
KDSR-202ENST00000406396 CRYBG3Q68DQ2 2970 aa9.55□□□□□ -0.88
KDSR-202ENST00000406396 DCHS2Q6V1P9 2916 aa9.51□□□□□ -0.89
KDSR-202ENST00000406396 USP34Q70CQ2 3546 aa9.49□□□□□ -0.89
KDSR-202ENST00000406396 DMXL1Q9Y485 3027 aa9.49□□□□□ -0.89
KDSR-202ENST00000406396 NDUFAF8A1L188 74 aa9.47□□□□□ -0.89
KDSR-202ENST00000406396 TENM4Q6N022 2769 aa9.47□□□□□ -0.89
KDSR-202ENST00000406396 C20orf166-AS1Q96NR2 134 aa9.45□□□□□ -0.9
KDSR-202ENST00000406396 LOC400499M0QZD8 3231 aa9.44□□□□□ -0.9
KDSR-202ENST00000406396 HRNRQ86YZ3 2850 aaPredicted RBP9.39□□□□□ -0.91
KDSR-202ENST00000406396 FBN2P35556 2912 aa9.35□□□□□ -0.91
KDSR-202ENST00000406396 MYO15AQ9UKN7 3530 aa9.32□□□□□ -0.92
KDSR-202ENST00000406396 TNP1P09430 55 aa9.32□□□□□ -0.92
KDSR-202ENST00000406396 NF1P21359 2839 aa9.31□□□□□ -0.92
KDSR-202ENST00000406396 KRTAP1-4P0C5Y4 121 aa9.26□□□□□ -0.93
KDSR-202ENST00000406396 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
KDSR-202ENST00000406396 H0YAA0 97 aa9.17□□□□□ -0.94
KDSR-202ENST00000406396 XP32Q5T750 250 aa9.17□□□□□ -0.94
KDSR-202ENST00000406396 PP632Q6XCG6 107 aa9.1□□□□□ -0.95
KDSR-202ENST00000406396 TENM3Q9P273 2699 aa9.06□□□□□ -0.96
KDSR-202ENST00000406396 RELNP78509 3460 aa9.05□□□□□ -0.96
KDSR-202ENST00000406396 MXRA5Q9NR99 2828 aa9.03□□□□□ -0.96
KDSR-202ENST00000406396 CELSR1Q9NYQ6 3014 aa9.03□□□□□ -0.96
KDSR-202ENST00000406396 A0A1B0GVY2 172 aa9.02□□□□□ -0.96
KDSR-202ENST00000406396 WDFY3Q8IZQ1 3526 aa9.02□□□□□ -0.97
KDSR-202ENST00000406396 TPRXLQ17RH7 258 aa9.02□□□□□ -0.97
KDSR-202ENST00000406396 TENM1Q9UKZ4 2725 aa9.01□□□□□ -0.97
KDSR-202ENST00000406396 KRTAP10-8P60410 259 aa9.01□□□□□ -0.97
KDSR-202ENST00000406396 P0C880 135 aa8.99□□□□□ -0.97
KDSR-202ENST00000406396 DCHS1Q96JQ0 3298 aa8.96□□□□□ -0.97
KDSR-202ENST00000406396 PDZD2O15018 2839 aa8.93□□□□□ -0.98
KDSR-202ENST00000406396 TGP01266 2768 aa8.87□□□□□ -0.99
KDSR-202ENST00000406396 TENM2Q9NT68 2774 aa8.87□□□□□ -0.99
KDSR-202ENST00000406396 ZFHX4Q86UP3 3567 aa8.86□□□□□ -0.99
KDSR-202ENST00000406396 KRTAP13-3Q3SY46 172 aa8.85□□□□□ -0.99
KDSR-202ENST00000406396 ASPMQ8IZT6 3477 aa8.82□□□□□ -1
KDSR-202ENST00000406396 PKD1L1Q8TDX9 2849 aa8.82□□□□□ -1
KDSR-202ENST00000406396 LAMA5O15230 3695 aa8.82□□□□□ -1
KDSR-202ENST00000406396 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
KDSR-202ENST00000406396 VWFP04275 2813 aa8.69□□□□□ -1.02
KDSR-202ENST00000406396 OTOGQ6ZRI0 2925 aa8.68□□□□□ -1.02
KDSR-202ENST00000406396 CSMD1Q96PZ7 3565 aa8.66□□□□□ -1.02
KDSR-202ENST00000406396 ANK3Q12955 4377 aaKnown RBP8.65□□□□□ -1.03
KDSR-202ENST00000406396 NBPF19A0A087WUL8 3843 aa8.63□□□□□ -1.03
KDSR-202ENST00000406396 PRO2289Q9P1D8 64 aa8.61□□□□□ -1.03
KDSR-202ENST00000406396 FBN1P35555 2871 aaKnown RBP8.61□□□□□ -1.03
KDSR-202ENST00000406396 KRTAP12-2P59991 146 aa8.59□□□□□ -1.03
KDSR-202ENST00000406396 DMDP11532 3685 aa8.57□□□□□ -1.04
KDSR-202ENST00000406396 SMG1Q96Q15 3661 aaKnown RBP8.54□□□□□ -1.04
KDSR-202ENST00000406396 MUC3AQ02505 3323 aa8.52□□□□□ -1.05
KDSR-202ENST00000406396 KRTAP12-1P59990 96 aa8.44□□□□□ -1.06
KDSR-202ENST00000406396 KRTAP13-4Q3LI77 160 aa8.42□□□□□ -1.06
KDSR-202ENST00000406396 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
KDSR-202ENST00000406396 SVEP1Q4LDE5 3571 aa8.41□□□□□ -1.06
KDSR-202ENST00000406396 ZFHX3Q15911 3703 aa8.39□□□□□ -1.07
KDSR-202ENST00000406396 CUBNO60494 3623 aa8.36□□□□□ -1.07
KDSR-202ENST00000406396 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
KDSR-202ENST00000406396 FBN3Q75N90 2809 aa8.26□□□□□ -1.09
KDSR-202ENST00000406396 CSMD2Q7Z408 3487 aa8.26□□□□□ -1.09
KDSR-202ENST00000406396 KRTAP10-6P60371 365 aaPredicted RBP8.2□□□□□ -1.1
KDSR-202ENST00000406396 MT1HL1P0DM35 61 aa8.15□□□□□ -1.11
KDSR-202ENST00000406396 SPENQ96T58 3664 aaKnown RBP8.14□□□□□ -1.11
KDSR-202ENST00000406396 BSNQ9UPA5 3926 aa8.13□□□□□ -1.11
KDSR-202ENST00000406396 MEGF8Q7Z7M0 2845 aa8.12□□□□□ -1.11
KDSR-202ENST00000406396 HUWE1Q7Z6Z7 4374 aaKnown RBP8.09□□□□□ -1.11
KDSR-202ENST00000406396 TRRAPQ9Y4A5 3859 aa8.09□□□□□ -1.11
KDSR-202ENST00000406396 COL7A1Q02388 2944 aa8.05□□□□□ -1.12
KDSR-202ENST00000406396 ALMS1Q8TCU4 4167 aa8.04□□□□□ -1.12
KDSR-202ENST00000406396 KRTAP15-1Q3LI76 137 aa8.03□□□□□ -1.12
KDSR-202ENST00000406396 KRTAP10-4P60372 401 aaPredicted RBP8.02□□□□□ -1.13
KDSR-202ENST00000406396 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
KDSR-202ENST00000406396 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
KDSR-202ENST00000406396 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
KDSR-202ENST00000406396 DNAH9Q9NYC9 4486 aa7.76□□□□□ -1.17
KDSR-202ENST00000406396 VPS13CQ709C8 3753 aa7.71□□□□□ -1.18
KDSR-202ENST00000406396 AKAP9Q99996 3911 aa7.69□□□□□ -1.18
KDSR-202ENST00000406396 INE1O15225 51 aa7.66□□□□□ -1.18
KDSR-202ENST00000406396 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
KDSR-202ENST00000406396 CSMD3Q7Z407 3707 aa7.52□□□□□ -1.21
KDSR-202ENST00000406396 DNAH5Q8TE73 4624 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms