RNA–Protein interactions for RNA: ENST00000405472.7

NRXN1-208, Transcript of neurexin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NRXN1, Length 5,724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-208ENST00000405472 MAP1AP78559 2803 aaPredicted RBP9.87□□□□□ -0.83
NRXN1-208ENST00000405472 KALRNO60229 2985 aa9.85□□□□□ -0.83
NRXN1-208ENST00000405472 APCP25054 2843 aa9.78□□□□□ -0.84
NRXN1-208ENST00000405472 FREM2Q5SZK8 3169 aa9.75□□□□□ -0.85
NRXN1-208ENST00000405472 KRTAP10-10P60014 251 aa9.75□□□□□ -0.85
NRXN1-208ENST00000405472 UTP20O75691 2785 aaKnown RBP9.75□□□□□ -0.85
NRXN1-208ENST00000405472 P0C880 135 aa9.74□□□□□ -0.85
NRXN1-208ENST00000405472 KRTAP13-3Q3SY46 172 aa9.73□□□□□ -0.85
NRXN1-208ENST00000405472 LRBAP50851 2863 aa9.73□□□□□ -0.85
NRXN1-208ENST00000405472 DNAH14Q0VDD8 3507 aa9.71□□□□□ -0.85
NRXN1-208ENST00000405472 ATMQ13315 3056 aa9.7□□□□□ -0.86
NRXN1-208ENST00000405472 COL6A3P12111 3177 aa9.69□□□□□ -0.86
NRXN1-208ENST00000405472 SZT2Q5T011 3432 aa9.66□□□□□ -0.86
NRXN1-208ENST00000405472 HIVEP1P15822 2718 aa9.65□□□□□ -0.86
NRXN1-208ENST00000405472 PRO2289Q9P1D8 64 aa9.65□□□□□ -0.87
NRXN1-208ENST00000405472 TACC2O95359 2948 aa9.64□□□□□ -0.87
NRXN1-208ENST00000405472 VCANP13611 3396 aa9.63□□□□□ -0.87
NRXN1-208ENST00000405472 COL12A1Q99715 3063 aa9.6□□□□□ -0.87
NRXN1-208ENST00000405472 LAMA1P25391 3075 aa9.58□□□□□ -0.88
NRXN1-208ENST00000405472 FLNCQ14315 2725 aa9.54□□□□□ -0.88
NRXN1-208ENST00000405472 CRYBG3Q68DQ2 2970 aa9.54□□□□□ -0.88
NRXN1-208ENST00000405472 ADGRG4Q8IZF6 3080 aa9.53□□□□□ -0.88
NRXN1-208ENST00000405472 DMXL2Q8TDJ6 3036 aa9.53□□□□□ -0.88
NRXN1-208ENST00000405472 ASH1LQ9NR48 2969 aaKnown RBP9.51□□□□□ -0.89
NRXN1-208ENST00000405472 BOD1L1Q8NFC6 3051 aa9.5□□□□□ -0.89
NRXN1-208ENST00000405472 EYSQ5T1H1 3165 aa9.48□□□□□ -0.89
NRXN1-208ENST00000405472 FRYLO94915 3013 aa9.46□□□□□ -0.9
NRXN1-208ENST00000405472 NBEAQ8NFP9 2946 aa9.42□□□□□ -0.9
NRXN1-208ENST00000405472 CFAP47Q6ZTR5 3102 aa9.41□□□□□ -0.9
NRXN1-208ENST00000405472 TENM4Q6N022 2769 aa9.41□□□□□ -0.9
NRXN1-208ENST00000405472 NIPBLQ6KC79 2804 aaeCLIP9.4□□□□□ -0.91
NRXN1-208ENST00000405472 SPTBN5Q9NRC6 3674 aaKnown RBP9.39□□□□□ -0.91
NRXN1-208ENST00000405472 KRTAP12-2P59991 146 aa9.37□□□□□ -0.91
NRXN1-208ENST00000405472 REV3LO60673 3130 aa9.37□□□□□ -0.91
NRXN1-208ENST00000405472 ZZEF1O43149 2961 aa9.33□□□□□ -0.92
NRXN1-208ENST00000405472 USP34Q70CQ2 3546 aa9.33□□□□□ -0.92
NRXN1-208ENST00000405472 CELSR2Q9HCU4 2923 aa9.32□□□□□ -0.92
NRXN1-208ENST00000405472 DCHS2Q6V1P9 2916 aa9.25□□□□□ -0.93
NRXN1-208ENST00000405472 HRNRQ86YZ3 2850 aaPredicted RBP9.24□□□□□ -0.93
NRXN1-208ENST00000405472 KRTAP13-4Q3LI77 160 aa9.21□□□□□ -0.93
NRXN1-208ENST00000405472 SPEGQ15772 3267 aa9.16□□□□□ -0.94
NRXN1-208ENST00000405472 KRTAP12-1P59990 96 aa9.15□□□□□ -0.94
NRXN1-208ENST00000405472 TNRC18O15417 2968 aaPredicted RBP9.14□□□□□ -0.95
NRXN1-208ENST00000405472 ZANQ9Y493 2812 aa9.1□□□□□ -0.95
NRXN1-208ENST00000405472 TENM2Q9NT68 2774 aa9.08□□□□□ -0.96
NRXN1-208ENST00000405472 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
NRXN1-208ENST00000405472 TGP01266 2768 aa9.04□□□□□ -0.96
NRXN1-208ENST00000405472 DMXL1Q9Y485 3027 aa9.02□□□□□ -0.97
NRXN1-208ENST00000405472 TENM1Q9UKZ4 2725 aa9□□□□□ -0.97
NRXN1-208ENST00000405472 NF1P21359 2839 aa8.98□□□□□ -0.97
NRXN1-208ENST00000405472 FBN2P35556 2912 aa8.96□□□□□ -0.97
NRXN1-208ENST00000405472 CELSR1Q9NYQ6 3014 aa8.94□□□□□ -0.98
NRXN1-208ENST00000405472 KRTAP15-1Q3LI76 137 aa8.89□□□□□ -0.99
NRXN1-208ENST00000405472 LOC400499M0QZD8 3231 aa8.84□□□□□ -0.99
NRXN1-208ENST00000405472 TENM3Q9P273 2699 aa8.83□□□□□ -1
NRXN1-208ENST00000405472 KRTAP10-6P60371 365 aaPredicted RBP8.81□□□□□ -1
NRXN1-208ENST00000405472 WDFY3Q8IZQ1 3526 aa8.76□□□□□ -1.01
NRXN1-208ENST00000405472 MYO15AQ9UKN7 3530 aa8.69□□□□□ -1.02
NRXN1-208ENST00000405472 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
NRXN1-208ENST00000405472 ASPMQ8IZT6 3477 aa8.67□□□□□ -1.02
NRXN1-208ENST00000405472 RELNP78509 3460 aa8.63□□□□□ -1.03
NRXN1-208ENST00000405472 ANK3Q12955 4377 aaKnown RBP8.63□□□□□ -1.03
NRXN1-208ENST00000405472 NBPF19A0A087WUL8 3843 aa8.63□□□□□ -1.03
NRXN1-208ENST00000405472 PDZD2O15018 2839 aa8.59□□□□□ -1.03
NRXN1-208ENST00000405472 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
NRXN1-208ENST00000405472 PKD1L1Q8TDX9 2849 aa8.51□□□□□ -1.05
NRXN1-208ENST00000405472 ZFHX4Q86UP3 3567 aa8.49□□□□□ -1.05
NRXN1-208ENST00000405472 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
NRXN1-208ENST00000405472 KRTAP3-2Q9BYR7 98 aa8.48□□□□□ -1.05
NRXN1-208ENST00000405472 DCHS1Q96JQ0 3298 aa8.47□□□□□ -1.05
NRXN1-208ENST00000405472 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
NRXN1-208ENST00000405472 VWFP04275 2813 aa8.46□□□□□ -1.05
NRXN1-208ENST00000405472 CSMD1Q96PZ7 3565 aa8.4□□□□□ -1.07
NRXN1-208ENST00000405472 CRCT1Q9UGL9 99 aa8.38□□□□□ -1.07
NRXN1-208ENST00000405472 INE1O15225 51 aa8.36□□□□□ -1.07
NRXN1-208ENST00000405472 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
NRXN1-208ENST00000405472 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
NRXN1-208ENST00000405472 LAMA5O15230 3695 aa8.29□□□□□ -1.08
NRXN1-208ENST00000405472 HUWE1Q7Z6Z7 4374 aaKnown RBP8.28□□□□□ -1.08
NRXN1-208ENST00000405472 OTOGQ6ZRI0 2925 aa8.26□□□□□ -1.09
NRXN1-208ENST00000405472 ALMS1Q8TCU4 4167 aa8.25□□□□□ -1.09
NRXN1-208ENST00000405472 KRTAP12-3P60328 96 aa8.21□□□□□ -1.1
NRXN1-208ENST00000405472 SMG1Q96Q15 3661 aaKnown RBP8.19□□□□□ -1.1
NRXN1-208ENST00000405472 FBN1P35555 2871 aaKnown RBP8.18□□□□□ -1.1
NRXN1-208ENST00000405472 LCE3AQ5TA76 89 aa8.15□□□□□ -1.1
NRXN1-208ENST00000405472 FBN3Q75N90 2809 aa8.14□□□□□ -1.11
NRXN1-208ENST00000405472 MEGF8Q7Z7M0 2845 aa8.11□□□□□ -1.11
NRXN1-208ENST00000405472 KRTAP23-1A1A580 65 aa8.1□□□□□ -1.11
NRXN1-208ENST00000405472 ZFHX3Q15911 3703 aa8.09□□□□□ -1.11
NRXN1-208ENST00000405472 DMDP11532 3685 aa8.05□□□□□ -1.12
NRXN1-208ENST00000405472 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
NRXN1-208ENST00000405472 TRRAPQ9Y4A5 3859 aa8.01□□□□□ -1.13
NRXN1-208ENST00000405472 SVEP1Q4LDE5 3571 aa7.98□□□□□ -1.13
NRXN1-208ENST00000405472 CSMD2Q7Z408 3487 aa7.92□□□□□ -1.14
NRXN1-208ENST00000405472 MUC3AQ02505 3323 aa7.88□□□□□ -1.15
NRXN1-208ENST00000405472 SPENQ96T58 3664 aaKnown RBP7.87□□□□□ -1.15
NRXN1-208ENST00000405472 COL7A1Q02388 2944 aa7.82□□□□□ -1.16
NRXN1-208ENST00000405472 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
NRXN1-208ENST00000405472 KRTAP8-1Q8IUC2 63 aa7.81□□□□□ -1.16
NRXN1-208ENST00000405472 BSNQ9UPA5 3926 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms