RNA–Protein interactions for RNA: ENST00000400960.6

CR1-206, Transcript of complement C3b/C4b receptor 1 (Knops blood group), humanhuman

TSL 1 (best) BASIC

Gene CR1, Length 6,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR1-206ENST00000400960 IGSF10Q6WRI0 2623 aa4.36□□□□□ -1.71
CR1-206ENST00000400960 USP34Q70CQ2 3546 aa4.35□□□□□ -1.71
CR1-206ENST00000400960 SPEGQ15772 3267 aa4.35□□□□□ -1.71
CR1-206ENST00000400960 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
CR1-206ENST00000400960 NBEAQ8NFP9 2946 aa4.34□□□□□ -1.71
CR1-206ENST00000400960 TEX15Q9BXT5 2789 aa4.33□□□□□ -1.72
CR1-206ENST00000400960 KALRNO60229 2985 aa4.33□□□□□ -1.72
CR1-206ENST00000400960 NBEAL2Q6ZNJ1 2754 aa4.33□□□□□ -1.72
CR1-206ENST00000400960 NOTCH1P46531 2555 aa4.32□□□□□ -1.72
CR1-206ENST00000400960 TRANK1O15050 2925 aa4.32□□□□□ -1.72
CR1-206ENST00000400960 MYO15AQ9UKN7 3530 aa4.32□□□□□ -1.72
CR1-206ENST00000400960 LRBAP50851 2863 aa4.32□□□□□ -1.72
CR1-206ENST00000400960 CFAP47Q6ZTR5 3102 aa4.31□□□□□ -1.72
CR1-206ENST00000400960 LAMA1P25391 3075 aa4.3□□□□□ -1.72
CR1-206ENST00000400960 MAP1AP78559 2803 aaPredicted RBP4.29□□□□□ -1.72
CR1-206ENST00000400960 FRYLO94915 3013 aa4.28□□□□□ -1.72
CR1-206ENST00000400960 DCHS1Q96JQ0 3298 aa4.28□□□□□ -1.72
CR1-206ENST00000400960 ATMQ13315 3056 aa4.26□□□□□ -1.73
CR1-206ENST00000400960 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
CR1-206ENST00000400960 ASPMQ8IZT6 3477 aa4.25□□□□□ -1.73
CR1-206ENST00000400960 ASH1LQ9NR48 2969 aaKnown RBP4.24□□□□□ -1.73
CR1-206ENST00000400960 APCP25054 2843 aa4.24□□□□□ -1.73
CR1-206ENST00000400960 BOD1L1Q8NFC6 3051 aa4.23□□□□□ -1.73
CR1-206ENST00000400960 DMXL2Q8TDJ6 3036 aa4.23□□□□□ -1.73
CR1-206ENST00000400960 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
CR1-206ENST00000400960 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
CR1-206ENST00000400960 ZZEF1O43149 2961 aa4.22□□□□□ -1.73
CR1-206ENST00000400960 CRYBG3Q68DQ2 2970 aa4.21□□□□□ -1.74
CR1-206ENST00000400960 KMT2BQ9UMN6 2715 aaPredicted RBP4.21□□□□□ -1.74
CR1-206ENST00000400960 STAB2Q8WWQ8 2551 aa4.19□□□□□ -1.74
CR1-206ENST00000400960 ITPR2Q14571 2701 aa4.18□□□□□ -1.74
CR1-206ENST00000400960 NSD1Q96L73 2696 aaPredicted RBP4.18□□□□□ -1.74
CR1-206ENST00000400960 ADGRG4Q8IZF6 3080 aa4.18□□□□□ -1.74
CR1-206ENST00000400960 COL12A1Q99715 3063 aa4.17□□□□□ -1.74
CR1-206ENST00000400960 WDFY3Q8IZQ1 3526 aa4.16□□□□□ -1.74
CR1-206ENST00000400960 TNRC18O15417 2968 aaPredicted RBP4.16□□□□□ -1.74
CR1-206ENST00000400960 LOC400499M0QZD8 3231 aa4.16□□□□□ -1.74
CR1-206ENST00000400960 DMXL1Q9Y485 3027 aa4.14□□□□□ -1.75
CR1-206ENST00000400960 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
CR1-206ENST00000400960 UBR5O95071 2799 aaPredicted RBP4.13□□□□□ -1.75
CR1-206ENST00000400960 TENM4Q6N022 2769 aa4.12□□□□□ -1.75
CR1-206ENST00000400960 HIVEP1P15822 2718 aa4.12□□□□□ -1.75
CR1-206ENST00000400960 CSMD1Q96PZ7 3565 aa4.12□□□□□ -1.75
CR1-206ENST00000400960 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
CR1-206ENST00000400960 ITPR1Q14643 2758 aa4.1□□□□□ -1.75
CR1-206ENST00000400960 ZFHX4Q86UP3 3567 aa4.1□□□□□ -1.75
CR1-206ENST00000400960 UTP20O75691 2785 aaKnown RBP4.07□□□□□ -1.76
CR1-206ENST00000400960 TACC2O95359 2948 aa4.06□□□□□ -1.76
CR1-206ENST00000400960 EYSQ5T1H1 3165 aa4.06□□□□□ -1.76
CR1-206ENST00000400960 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
CR1-206ENST00000400960 CUBNO60494 3623 aa4.04□□□□□ -1.76
CR1-206ENST00000400960 FLNCQ14315 2725 aa4.04□□□□□ -1.76
CR1-206ENST00000400960 LAMA5O15230 3695 aa4.03□□□□□ -1.76
CR1-206ENST00000400960 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
CR1-206ENST00000400960 INE1O15225 51 aa3.95□□□□□ -1.78
CR1-206ENST00000400960 TGP01266 2768 aa3.92□□□□□ -1.78
CR1-206ENST00000400960 KRTAP10-12P60413 245 aa3.92□□□□□ -1.78
CR1-206ENST00000400960 SMG1Q96Q15 3661 aaKnown RBP3.9□□□□□ -1.78
CR1-206ENST00000400960 NIPBLQ6KC79 2804 aaeCLIP3.88□□□□□ -1.79
CR1-206ENST00000400960 HRNRQ86YZ3 2850 aaPredicted RBP3.88□□□□□ -1.79
CR1-206ENST00000400960 RELNP78509 3460 aa3.88□□□□□ -1.79
CR1-206ENST00000400960 CELSR1Q9NYQ6 3014 aa3.87□□□□□ -1.79
CR1-206ENST00000400960 ANK3Q12955 4377 aaKnown RBP3.87□□□□□ -1.79
CR1-206ENST00000400960 DMDP11532 3685 aa3.86□□□□□ -1.79
CR1-206ENST00000400960 SPENQ96T58 3664 aaKnown RBP3.86□□□□□ -1.79
CR1-206ENST00000400960 CELSR2Q9HCU4 2923 aa3.85□□□□□ -1.79
CR1-206ENST00000400960 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
CR1-206ENST00000400960 KRTAP3-3Q9BYR6 98 aa3.83□□□□□ -1.8
CR1-206ENST00000400960 KRTAP3-2Q9BYR7 98 aa3.82□□□□□ -1.8
CR1-206ENST00000400960 HUWE1Q7Z6Z7 4374 aaKnown RBP3.8□□□□□ -1.8
CR1-206ENST00000400960 SVEP1Q4LDE5 3571 aa3.8□□□□□ -1.8
CR1-206ENST00000400960 DCHS2Q6V1P9 2916 aa3.8□□□□□ -1.8
CR1-206ENST00000400960 TENM2Q9NT68 2774 aa3.8□□□□□ -1.8
CR1-206ENST00000400960 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
CR1-206ENST00000400960 AKAP9Q99996 3911 aa3.78□□□□□ -1.8
CR1-206ENST00000400960 SRRM2Q9UQ35 2752 aaKnown RBP3.78□□□□□ -1.8
CR1-206ENST00000400960 ALMS1Q8TCU4 4167 aa3.77□□□□□ -1.81
CR1-206ENST00000400960 KRTAP10-5P60370 271 aa3.75□□□□□ -1.81
CR1-206ENST00000400960 FBN2P35556 2912 aa3.75□□□□□ -1.81
CR1-206ENST00000400960 NF1P21359 2839 aa3.74□□□□□ -1.81
CR1-206ENST00000400960 TENM3Q9P273 2699 aa3.73□□□□□ -1.81
CR1-206ENST00000400960 MT1HL1P0DM35 61 aa3.73□□□□□ -1.81
CR1-206ENST00000400960 TENM1Q9UKZ4 2725 aa3.71□□□□□ -1.82
CR1-206ENST00000400960 LORP23490 312 aaPredicted RBP3.71□□□□□ -1.82
CR1-206ENST00000400960 KRTAP4-5Q9BYR2 181 aa3.71□□□□□ -1.82
CR1-206ENST00000400960 VPS13CQ709C8 3753 aa3.7□□□□□ -1.82
CR1-206ENST00000400960 ZFHX3Q15911 3703 aa3.7□□□□□ -1.82
CR1-206ENST00000400960 PDZD2O15018 2839 aa3.69□□□□□ -1.82
CR1-206ENST00000400960 BSNQ9UPA5 3926 aa3.68□□□□□ -1.82
CR1-206ENST00000400960 MXRA5Q9NR99 2828 aa3.67□□□□□ -1.82
CR1-206ENST00000400960 ZANQ9Y493 2812 aa3.65□□□□□ -1.82
CR1-206ENST00000400960 MUC3AQ02505 3323 aa3.62□□□□□ -1.83
CR1-206ENST00000400960 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
CR1-206ENST00000400960 CSMD2Q7Z408 3487 aa3.59□□□□□ -1.84
CR1-206ENST00000400960 TRRAPQ9Y4A5 3859 aa3.58□□□□□ -1.84
CR1-206ENST00000400960 CSMD3Q7Z407 3707 aa3.58□□□□□ -1.84
CR1-206ENST00000400960 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
CR1-206ENST00000400960 KRTAP10-4P60372 401 aaPredicted RBP3.55□□□□□ -1.84
CR1-206ENST00000400960 PKD1L1Q8TDX9 2849 aa3.53□□□□□ -1.84
CR1-206ENST00000400960 VWFP04275 2813 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms