RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 LAMA1P25391 3075 aa5.77□□□□□ -1.49
HLCS-202ENST00000399120 KMT2BQ9UMN6 2715 aaPredicted RBP5.77□□□□□ -1.49
HLCS-202ENST00000399120 VPS13AQ96RL7 3174 aa5.76□□□□□ -1.49
HLCS-202ENST00000399120 ITPR2Q14571 2701 aa5.76□□□□□ -1.49
HLCS-202ENST00000399120 TNRC18O15417 2968 aaPredicted RBP5.75□□□□□ -1.49
HLCS-202ENST00000399120 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
HLCS-202ENST00000399120 DSPP15924 2871 aaKnown RBP5.71□□□□□ -1.49
HLCS-202ENST00000399120 VCANP13611 3396 aa5.71□□□□□ -1.5
HLCS-202ENST00000399120 DNAH14Q0VDD8 3507 aa5.7□□□□□ -1.5
HLCS-202ENST00000399120 APCP25054 2843 aa5.7□□□□□ -1.5
HLCS-202ENST00000399120 REV3LO60673 3130 aa5.7□□□□□ -1.5
HLCS-202ENST00000399120 FRYQ5TBA9 3013 aa5.69□□□□□ -1.5
HLCS-202ENST00000399120 SPTBN5Q9NRC6 3674 aaKnown RBP5.69□□□□□ -1.5
HLCS-202ENST00000399120 UBR5O95071 2799 aaPredicted RBP5.69□□□□□ -1.5
HLCS-202ENST00000399120 KRTAP12-1P59990 96 aa5.66□□□□□ -1.5
HLCS-202ENST00000399120 COL6A3P12111 3177 aa5.61□□□□□ -1.51
HLCS-202ENST00000399120 CELSR3Q9NYQ7 3312 aa5.56□□□□□ -1.52
HLCS-202ENST00000399120 FLNCQ14315 2725 aa5.55□□□□□ -1.52
HLCS-202ENST00000399120 FRYLO94915 3013 aa5.53□□□□□ -1.52
HLCS-202ENST00000399120 DMXL2Q8TDJ6 3036 aa5.53□□□□□ -1.52
HLCS-202ENST00000399120 NBEAQ8NFP9 2946 aa5.52□□□□□ -1.53
HLCS-202ENST00000399120 EYSQ5T1H1 3165 aa5.52□□□□□ -1.53
HLCS-202ENST00000399120 BOD1L1Q8NFC6 3051 aa5.52□□□□□ -1.53
HLCS-202ENST00000399120 ITPR1Q14643 2758 aa5.52□□□□□ -1.53
HLCS-202ENST00000399120 INE1O15225 51 aa5.52□□□□□ -1.53
HLCS-202ENST00000399120 ADGRG4Q8IZF6 3080 aa5.51□□□□□ -1.53
HLCS-202ENST00000399120 ATMQ13315 3056 aa5.51□□□□□ -1.53
HLCS-202ENST00000399120 HIVEP1P15822 2718 aa5.49□□□□□ -1.53
HLCS-202ENST00000399120 USP34Q70CQ2 3546 aa5.49□□□□□ -1.53
HLCS-202ENST00000399120 UTP20O75691 2785 aaKnown RBP5.48□□□□□ -1.53
HLCS-202ENST00000399120 FREM2Q5SZK8 3169 aa5.47□□□□□ -1.53
HLCS-202ENST00000399120 CRYBG3Q68DQ2 2970 aa5.46□□□□□ -1.53
HLCS-202ENST00000399120 DMXL1Q9Y485 3027 aa5.46□□□□□ -1.54
HLCS-202ENST00000399120 SPEGQ15772 3267 aa5.45□□□□□ -1.54
HLCS-202ENST00000399120 LRBAP50851 2863 aa5.45□□□□□ -1.54
HLCS-202ENST00000399120 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
HLCS-202ENST00000399120 COL12A1Q99715 3063 aa5.42□□□□□ -1.54
HLCS-202ENST00000399120 KALRNO60229 2985 aa5.42□□□□□ -1.54
HLCS-202ENST00000399120 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
HLCS-202ENST00000399120 TENM4Q6N022 2769 aa5.41□□□□□ -1.54
HLCS-202ENST00000399120 HRNRQ86YZ3 2850 aaPredicted RBP5.41□□□□□ -1.54
HLCS-202ENST00000399120 KRTAP3-1Q9BYR8 98 aa5.4□□□□□ -1.54
HLCS-202ENST00000399120 TGP01266 2768 aa5.38□□□□□ -1.55
HLCS-202ENST00000399120 LOC400499M0QZD8 3231 aa5.36□□□□□ -1.55
HLCS-202ENST00000399120 TENM3Q9P273 2699 aa5.34□□□□□ -1.55
HLCS-202ENST00000399120 TACC2O95359 2948 aa5.34□□□□□ -1.56
HLCS-202ENST00000399120 MYO15AQ9UKN7 3530 aa5.32□□□□□ -1.56
HLCS-202ENST00000399120 ZZEF1O43149 2961 aa5.32□□□□□ -1.56
HLCS-202ENST00000399120 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
HLCS-202ENST00000399120 KRTAP10-6P60371 365 aaPredicted RBP5.31□□□□□ -1.56
HLCS-202ENST00000399120 TENM1Q9UKZ4 2725 aa5.3□□□□□ -1.56
HLCS-202ENST00000399120 ZANQ9Y493 2812 aa5.28□□□□□ -1.56
HLCS-202ENST00000399120 NIPBLQ6KC79 2804 aaeCLIP5.25□□□□□ -1.57
HLCS-202ENST00000399120 CELSR2Q9HCU4 2923 aa5.23□□□□□ -1.57
HLCS-202ENST00000399120 TENM2Q9NT68 2774 aa5.22□□□□□ -1.57
HLCS-202ENST00000399120 CFAP47Q6ZTR5 3102 aa5.19□□□□□ -1.58
HLCS-202ENST00000399120 WDFY3Q8IZQ1 3526 aa5.16□□□□□ -1.58
HLCS-202ENST00000399120 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
HLCS-202ENST00000399120 DCHS2Q6V1P9 2916 aa5.16□□□□□ -1.58
HLCS-202ENST00000399120 DMDP11532 3685 aa5.14□□□□□ -1.59
HLCS-202ENST00000399120 MUC3AQ02505 3323 aa5.14□□□□□ -1.59
HLCS-202ENST00000399120 PDZD2O15018 2839 aa5.13□□□□□ -1.59
HLCS-202ENST00000399120 FBN2P35556 2912 aa5.13□□□□□ -1.59
HLCS-202ENST00000399120 MXRA5Q9NR99 2828 aa5.12□□□□□ -1.59
HLCS-202ENST00000399120 NF1P21359 2839 aa5.11□□□□□ -1.59
HLCS-202ENST00000399120 RELNP78509 3460 aa5.09□□□□□ -1.59
HLCS-202ENST00000399120 LAMA5O15230 3695 aa5.07□□□□□ -1.6
HLCS-202ENST00000399120 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
HLCS-202ENST00000399120 KRTAP10-5P60370 271 aa5.05□□□□□ -1.6
HLCS-202ENST00000399120 LCE3AQ5TA76 89 aa5.05□□□□□ -1.6
HLCS-202ENST00000399120 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
HLCS-202ENST00000399120 DCHS1Q96JQ0 3298 aa5.02□□□□□ -1.61
HLCS-202ENST00000399120 KRTAP3-3Q9BYR6 98 aa5.02□□□□□ -1.61
HLCS-202ENST00000399120 ZFHX4Q86UP3 3567 aa5.01□□□□□ -1.61
HLCS-202ENST00000399120 CELSR1Q9NYQ6 3014 aa5□□□□□ -1.61
HLCS-202ENST00000399120 ASPMQ8IZT6 3477 aa4.99□□□□□ -1.61
HLCS-202ENST00000399120 MT1HL1P0DM35 61 aa4.98□□□□□ -1.61
HLCS-202ENST00000399120 SMG1Q96Q15 3661 aaKnown RBP4.93□□□□□ -1.62
HLCS-202ENST00000399120 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
HLCS-202ENST00000399120 BSNQ9UPA5 3926 aa4.89□□□□□ -1.63
HLCS-202ENST00000399120 PKD1L1Q8TDX9 2849 aa4.88□□□□□ -1.63
HLCS-202ENST00000399120 OTOGQ6ZRI0 2925 aa4.88□□□□□ -1.63
HLCS-202ENST00000399120 VWFP04275 2813 aa4.86□□□□□ -1.63
HLCS-202ENST00000399120 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
HLCS-202ENST00000399120 SPENQ96T58 3664 aaKnown RBP4.82□□□□□ -1.64
HLCS-202ENST00000399120 CSMD1Q96PZ7 3565 aa4.82□□□□□ -1.64
HLCS-202ENST00000399120 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
HLCS-202ENST00000399120 NBPF19A0A087WUL8 3843 aa4.75□□□□□ -1.65
HLCS-202ENST00000399120 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
HLCS-202ENST00000399120 SVEP1Q4LDE5 3571 aa4.73□□□□□ -1.65
HLCS-202ENST00000399120 FBN3Q75N90 2809 aa4.7□□□□□ -1.66
HLCS-202ENST00000399120 MEGF8Q7Z7M0 2845 aa4.69□□□□□ -1.66
HLCS-202ENST00000399120 FBN1P35555 2871 aaKnown RBP4.67□□□□□ -1.66
HLCS-202ENST00000399120 KRTAP10-4P60372 401 aaPredicted RBP4.66□□□□□ -1.66
HLCS-202ENST00000399120 CSMD2Q7Z408 3487 aa4.64□□□□□ -1.67
HLCS-202ENST00000399120 SRRM2Q9UQ35 2752 aaKnown RBP4.62□□□□□ -1.67
HLCS-202ENST00000399120 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
HLCS-202ENST00000399120 ZFHX3Q15911 3703 aa4.58□□□□□ -1.68
HLCS-202ENST00000399120 TRRAPQ9Y4A5 3859 aa4.57□□□□□ -1.68
HLCS-202ENST00000399120 COL7A1Q02388 2944 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms