RNA–Protein interactions for RNA: ENST00000398146.3

RGPD2-201, Transcript of RANBP2-like and GRIP domain containing 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD2, Length 6,931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD2-201ENST00000398146 MGAQ8IWI9 3026 aa5.7□□□□□ -1.5
RGPD2-201ENST00000398146 ZNF292O60281 2723 aa5.69□□□□□ -1.5
RGPD2-201ENST00000398146 NBEAL2Q6ZNJ1 2754 aa5.69□□□□□ -1.5
RGPD2-201ENST00000398146 KRTAP12-2P59991 146 aa5.67□□□□□ -1.5
RGPD2-201ENST00000398146 DMDP11532 3685 aa5.67□□□□□ -1.5
RGPD2-201ENST00000398146 H0YAA0 97 aa5.64□□□□□ -1.51
RGPD2-201ENST00000398146 NSD1Q96L73 2696 aaPredicted RBP5.62□□□□□ -1.51
RGPD2-201ENST00000398146 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
RGPD2-201ENST00000398146 MAP1AP78559 2803 aaPredicted RBP5.58□□□□□ -1.52
RGPD2-201ENST00000398146 MUC3AQ02505 3323 aa5.57□□□□□ -1.52
RGPD2-201ENST00000398146 PRUNE2Q8WUY3 3088 aa5.57□□□□□ -1.52
RGPD2-201ENST00000398146 UBR5O95071 2799 aaPredicted RBP5.53□□□□□ -1.52
RGPD2-201ENST00000398146 CHD7Q9P2D1 2997 aa5.52□□□□□ -1.53
RGPD2-201ENST00000398146 FREM2Q5SZK8 3169 aa5.51□□□□□ -1.53
RGPD2-201ENST00000398146 TRIOO75962 3097 aa5.51□□□□□ -1.53
RGPD2-201ENST00000398146 WDFY4Q6ZS81 3184 aa5.51□□□□□ -1.53
RGPD2-201ENST00000398146 TENM4Q6N022 2769 aa5.5□□□□□ -1.53
RGPD2-201ENST00000398146 SPENQ96T58 3664 aaKnown RBP5.48□□□□□ -1.53
RGPD2-201ENST00000398146 APCP25054 2843 aa5.47□□□□□ -1.53
RGPD2-201ENST00000398146 DSPP15924 2871 aaKnown RBP5.46□□□□□ -1.54
RGPD2-201ENST00000398146 CELSR3Q9NYQ7 3312 aa5.45□□□□□ -1.54
RGPD2-201ENST00000398146 HIVEP1P15822 2718 aa5.44□□□□□ -1.54
RGPD2-201ENST00000398146 ASPMQ8IZT6 3477 aa5.44□□□□□ -1.54
RGPD2-201ENST00000398146 LAMA1P25391 3075 aa5.42□□□□□ -1.54
RGPD2-201ENST00000398146 CHD9Q3L8U1 2897 aa5.41□□□□□ -1.54
RGPD2-201ENST00000398146 UTP20O75691 2785 aaKnown RBP5.41□□□□□ -1.54
RGPD2-201ENST00000398146 FLNCQ14315 2725 aa5.4□□□□□ -1.55
RGPD2-201ENST00000398146 KRTAP13-4Q3LI77 160 aa5.4□□□□□ -1.55
RGPD2-201ENST00000398146 FRYLO94915 3013 aa5.39□□□□□ -1.55
RGPD2-201ENST00000398146 VPS13AQ96RL7 3174 aa5.39□□□□□ -1.55
RGPD2-201ENST00000398146 TRANK1O15050 2925 aa5.39□□□□□ -1.55
RGPD2-201ENST00000398146 ZFHX4Q86UP3 3567 aa5.39□□□□□ -1.55
RGPD2-201ENST00000398146 DMXL2Q8TDJ6 3036 aa5.37□□□□□ -1.55
RGPD2-201ENST00000398146 TACC2O95359 2948 aa5.37□□□□□ -1.55
RGPD2-201ENST00000398146 LOC400499M0QZD8 3231 aa5.37□□□□□ -1.55
RGPD2-201ENST00000398146 CFAP47Q6ZTR5 3102 aa5.36□□□□□ -1.55
RGPD2-201ENST00000398146 TENM2Q9NT68 2774 aa5.36□□□□□ -1.55
RGPD2-201ENST00000398146 ITPR1Q14643 2758 aa5.36□□□□□ -1.55
RGPD2-201ENST00000398146 LORP23490 312 aaPredicted RBP5.3□□□□□ -1.56
RGPD2-201ENST00000398146 ASH1LQ9NR48 2969 aaKnown RBP5.3□□□□□ -1.56
RGPD2-201ENST00000398146 TENM1Q9UKZ4 2725 aa5.29□□□□□ -1.56
RGPD2-201ENST00000398146 COL6A3P12111 3177 aa5.29□□□□□ -1.56
RGPD2-201ENST00000398146 LRBAP50851 2863 aa5.27□□□□□ -1.57
RGPD2-201ENST00000398146 KALRNO60229 2985 aa5.26□□□□□ -1.57
RGPD2-201ENST00000398146 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
RGPD2-201ENST00000398146 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
RGPD2-201ENST00000398146 LAMA5O15230 3695 aa5.22□□□□□ -1.57
RGPD2-201ENST00000398146 ZFHX3Q15911 3703 aa5.22□□□□□ -1.57
RGPD2-201ENST00000398146 COL12A1Q99715 3063 aa5.19□□□□□ -1.58
RGPD2-201ENST00000398146 SMG1Q96Q15 3661 aaKnown RBP5.18□□□□□ -1.58
RGPD2-201ENST00000398146 ATMQ13315 3056 aa5.17□□□□□ -1.58
RGPD2-201ENST00000398146 KRTAP10-6P60371 365 aaPredicted RBP5.16□□□□□ -1.58
RGPD2-201ENST00000398146 DCHS1Q96JQ0 3298 aa5.16□□□□□ -1.58
RGPD2-201ENST00000398146 TENM3Q9P273 2699 aa5.13□□□□□ -1.59
RGPD2-201ENST00000398146 TNRC18O15417 2968 aaPredicted RBP5.11□□□□□ -1.59
RGPD2-201ENST00000398146 CELSR2Q9HCU4 2923 aa5.11□□□□□ -1.59
RGPD2-201ENST00000398146 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
RGPD2-201ENST00000398146 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
RGPD2-201ENST00000398146 RELNP78509 3460 aa5.08□□□□□ -1.6
RGPD2-201ENST00000398146 BOD1L1Q8NFC6 3051 aa5.07□□□□□ -1.6
RGPD2-201ENST00000398146 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
RGPD2-201ENST00000398146 DCHS2Q6V1P9 2916 aa5.05□□□□□ -1.6
RGPD2-201ENST00000398146 NF1P21359 2839 aa5.04□□□□□ -1.6
RGPD2-201ENST00000398146 TGP01266 2768 aa5.03□□□□□ -1.6
RGPD2-201ENST00000398146 PKD1L1Q8TDX9 2849 aa5.03□□□□□ -1.6
RGPD2-201ENST00000398146 ADGRG4Q8IZF6 3080 aa5.02□□□□□ -1.61
RGPD2-201ENST00000398146 SVEP1Q4LDE5 3571 aa5.01□□□□□ -1.61
RGPD2-201ENST00000398146 VWFP04275 2813 aa5.01□□□□□ -1.61
RGPD2-201ENST00000398146 NBPF19A0A087WUL8 3843 aa5.01□□□□□ -1.61
RGPD2-201ENST00000398146 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
RGPD2-201ENST00000398146 CSMD1Q96PZ7 3565 aa4.97□□□□□ -1.61
RGPD2-201ENST00000398146 ZZEF1O43149 2961 aa4.97□□□□□ -1.61
RGPD2-201ENST00000398146 PDZD2O15018 2839 aa4.97□□□□□ -1.61
RGPD2-201ENST00000398146 DMXL1Q9Y485 3027 aa4.97□□□□□ -1.61
RGPD2-201ENST00000398146 KRTAP12-3P60328 96 aa4.96□□□□□ -1.62
RGPD2-201ENST00000398146 ZANQ9Y493 2812 aa4.96□□□□□ -1.62
RGPD2-201ENST00000398146 NBEAQ8NFP9 2946 aa4.95□□□□□ -1.62
RGPD2-201ENST00000398146 MT1HL1P0DM35 61 aa4.95□□□□□ -1.62
RGPD2-201ENST00000398146 CELSR1Q9NYQ6 3014 aa4.94□□□□□ -1.62
RGPD2-201ENST00000398146 BSNQ9UPA5 3926 aa4.94□□□□□ -1.62
RGPD2-201ENST00000398146 VPS13CQ709C8 3753 aa4.93□□□□□ -1.62
RGPD2-201ENST00000398146 CSMD2Q7Z408 3487 aa4.93□□□□□ -1.62
RGPD2-201ENST00000398146 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
RGPD2-201ENST00000398146 NIPBLQ6KC79 2804 aaeCLIP4.88□□□□□ -1.63
RGPD2-201ENST00000398146 INE1O15225 51 aa4.84□□□□□ -1.63
RGPD2-201ENST00000398146 FBN3Q75N90 2809 aa4.81□□□□□ -1.64
RGPD2-201ENST00000398146 SPRR2FQ96RM1 72 aa4.79□□□□□ -1.64
RGPD2-201ENST00000398146 CUBNO60494 3623 aa4.73□□□□□ -1.65
RGPD2-201ENST00000398146 AKAP9Q99996 3911 aa4.73□□□□□ -1.65
RGPD2-201ENST00000398146 KRTAP10-7P60409 375 aaPredicted RBP4.72□□□□□ -1.65
RGPD2-201ENST00000398146 FBN2P35556 2912 aa4.67□□□□□ -1.66
RGPD2-201ENST00000398146 SRRM2Q9UQ35 2752 aaKnown RBP4.66□□□□□ -1.66
RGPD2-201ENST00000398146 KRTAP3-3Q9BYR6 98 aa4.62□□□□□ -1.67
RGPD2-201ENST00000398146 SPRR2EP22531 72 aa4.61□□□□□ -1.67
RGPD2-201ENST00000398146 SPRR2BP35325 72 aa4.61□□□□□ -1.67
RGPD2-201ENST00000398146 SPRR2AP35326 72 aa4.61□□□□□ -1.67
RGPD2-201ENST00000398146 KRTAP3-2Q9BYR7 98 aa4.59□□□□□ -1.67
RGPD2-201ENST00000398146 ALMS1Q8TCU4 4167 aa4.56□□□□□ -1.68
RGPD2-201ENST00000398146 MXRA5Q9NR99 2828 aa4.56□□□□□ -1.68
RGPD2-201ENST00000398146 HRNRQ86YZ3 2850 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms