RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PRR15Q8IV56 129 aa11.01□□□□□ -0.65
PDLIM2-205ENST00000397761 A0A087WVE0 104 aa11□□□□□ -0.65
PDLIM2-205ENST00000397761 J3QL48 77 aa10.99□□□□□ -0.65
PDLIM2-205ENST00000397761 NDUFB1O75438 58 aa10.99□□□□□ -0.65
PDLIM2-205ENST00000397761 A0A1B0GVX0 72 aa10.97□□□□□ -0.65
PDLIM2-205ENST00000397761 SCGB1A1P11684 91 aa10.93□□□□□ -0.66
PDLIM2-205ENST00000397761 IGHV6-1A0A0B4J1U7 121 aa10.9□□□□□ -0.66
PDLIM2-205ENST00000397761 MMP24-AS1A0A0U1RRL7 71 aa10.89□□□□□ -0.67
PDLIM2-205ENST00000397761 FAM236AA0A1B0GUQ0 79 aa10.89□□□□□ -0.67
PDLIM2-205ENST00000397761 FAM236BA0A1B0GV22 79 aa10.89□□□□□ -0.67
PDLIM2-205ENST00000397761 HCG22E2RYF7 251 aa10.89□□□□□ -0.67
PDLIM2-205ENST00000397761 C8orf17Q9NRJ1 99 aa10.88□□□□□ -0.67
PDLIM2-205ENST00000397761 RETNLBQ9BQ08 111 aa10.87□□□□□ -0.67
PDLIM2-205ENST00000397761 C8orf87E5RJ46 101 aa10.87□□□□□ -0.67
PDLIM2-205ENST00000397761 NOTCH2NLQ7Z3S9 236 aa10.86□□□□□ -0.67
PDLIM2-205ENST00000397761 FP248Q71RG6 208 aaPredicted RBP10.85□□□□□ -0.67
PDLIM2-205ENST00000397761 CASC2Q6XLA1 102 aa10.82□□□□□ -0.68
PDLIM2-205ENST00000397761 WFDC13Q8IUB5 93 aa10.81□□□□□ -0.68
PDLIM2-205ENST00000397761 hDV103S1A0JD37 113 aa10.81□□□□□ -0.68
PDLIM2-205ENST00000397761 LINC00313P59037 77 aa10.81□□□□□ -0.68
PDLIM2-205ENST00000397761 HMCN2Q8NDA2 5059 aa10.8□□□□□ -0.68
PDLIM2-205ENST00000397761 TMEM254Q8TBM7 123 aa10.79□□□□□ -0.68
PDLIM2-205ENST00000397761 KRTAP16-1A8MUX0 517 aa10.77□□□□□ -0.69
PDLIM2-205ENST00000397761 ATOX1O00244 68 aa10.77□□□□□ -0.69
PDLIM2-205ENST00000397761 MRPL34Q9BQ48 92 aaKnown RBP10.74□□□□□ -0.69
PDLIM2-205ENST00000397761 IGLV7-46A0A075B6I9 117 aa10.72□□□□□ -0.69
PDLIM2-205ENST00000397761 OCR1Q9BZK8 76 aa10.72□□□□□ -0.69
PDLIM2-205ENST00000397761 SMIM20Q8N5G0 67 aa10.7□□□□□ -0.7
PDLIM2-205ENST00000397761 Q8N9P0 234 aaPredicted RBP10.69□□□□□ -0.7
PDLIM2-205ENST00000397761 KRTAP13-3Q3SY46 172 aa10.67□□□□□ -0.7
PDLIM2-205ENST00000397761 TRAV7A0A075B6U4 112 aa10.66□□□□□ -0.7
PDLIM2-205ENST00000397761 C9orf92A6NGG3 77 aa10.65□□□□□ -0.7
PDLIM2-205ENST00000397761 PRR4Q16378 134 aa10.65□□□□□ -0.7
PDLIM2-205ENST00000397761 ANAPC13Q9BS18 74 aa10.65□□□□□ -0.7
PDLIM2-205ENST00000397761 SERP2Q8N6R1 65 aa10.64□□□□□ -0.71
PDLIM2-205ENST00000397761 TP53AIP1Q9HCN2 124 aa10.62□□□□□ -0.71
PDLIM2-205ENST00000397761 TPRXLQ17RH7 258 aa10.61□□□□□ -0.71
PDLIM2-205ENST00000397761 C20orf166-AS1Q96NR2 134 aa10.61□□□□□ -0.71
PDLIM2-205ENST00000397761 A8MUU9 505 aa10.6□□□□□ -0.71
PDLIM2-205ENST00000397761 UQCRQO14949 82 aa10.6□□□□□ -0.71
PDLIM2-205ENST00000397761 NDUFS5O43920 106 aa10.58□□□□□ -0.72
PDLIM2-205ENST00000397761 UBR4Q5T4S7 5183 aa10.57□□□□□ -0.72
PDLIM2-205ENST00000397761 COX7CP15954 63 aa10.56□□□□□ -0.72
PDLIM2-205ENST00000397761 Q75L30 129 aa10.54□□□□□ -0.72
PDLIM2-205ENST00000397761 C5orf47Q569G3 176 aa10.53□□□□□ -0.72
PDLIM2-205ENST00000397761 XP32Q5T750 250 aa10.53□□□□□ -0.72
PDLIM2-205ENST00000397761 PCP4P48539 62 aa10.52□□□□□ -0.73
PDLIM2-205ENST00000397761 TRAV22A0A0B4J277 110 aa10.49□□□□□ -0.73
PDLIM2-205ENST00000397761 Q5W150 140 aa10.49□□□□□ -0.73
PDLIM2-205ENST00000397761 LRP2P98164 4655 aa10.46□□□□□ -0.73
PDLIM2-205ENST00000397761 H0Y9P7 68 aa10.46□□□□□ -0.74
PDLIM2-205ENST00000397761 RPL37P61927 97 aaKnown RBP10.45□□□□□ -0.74
PDLIM2-205ENST00000397761 ZCCHC13Q8WW36 166 aaKnown RBP10.45□□□□□ -0.74
PDLIM2-205ENST00000397761 CCDC179H3BU77 68 aa10.43□□□□□ -0.74
PDLIM2-205ENST00000397761 MP68P56378 58 aa10.43□□□□□ -0.74
PDLIM2-205ENST00000397761 A0A0U1RQV1 116 aa10.42□□□□□ -0.74
PDLIM2-205ENST00000397761 H3BPC8 53 aa10.42□□□□□ -0.74
PDLIM2-205ENST00000397761 KLKP1Q107X0 134 aa10.41□□□□□ -0.74
PDLIM2-205ENST00000397761 C20orf197Q8N268 126 aa10.41□□□□□ -0.74
PDLIM2-205ENST00000397761 LINC00208Q96KT6 92 aa10.37□□□□□ -0.75
PDLIM2-205ENST00000397761 LPAP08519 4548 aa10.36□□□□□ -0.75
PDLIM2-205ENST00000397761 C1orf64Q8NEQ6 169 aa10.36□□□□□ -0.75
PDLIM2-205ENST00000397761 ATP11AUNQ6ZP68 121 aa10.34□□□□□ -0.75
PDLIM2-205ENST00000397761 SNURFQ9Y675 71 aa10.34□□□□□ -0.75
PDLIM2-205ENST00000397761 LOC101927531A0A1B0GV80 90 aa10.33□□□□□ -0.76
PDLIM2-205ENST00000397761 CYSTM1Q9H1C7 97 aa10.31□□□□□ -0.76
PDLIM2-205ENST00000397761 IGKV2-30P06310 120 aa10.3□□□□□ -0.76
PDLIM2-205ENST00000397761 CYP4F30PQ9H0H9 118 aa10.28□□□□□ -0.76
PDLIM2-205ENST00000397761 RNF213Q63HN8 5207 aa10.25□□□□□ -0.77
PDLIM2-205ENST00000397761 NDUFC1O43677 76 aa10.24□□□□□ -0.77
PDLIM2-205ENST00000397761 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
PDLIM2-205ENST00000397761 H7BZZ5 65 aa10.23□□□□□ -0.77
PDLIM2-205ENST00000397761 C7orf65Q6ZTY9 151 aa10.23□□□□□ -0.77
PDLIM2-205ENST00000397761 IGKV2D-30A0A075B6S6 120 aa10.22□□□□□ -0.77
PDLIM2-205ENST00000397761 SEC61BP60468 96 aaKnown RBP10.21□□□□□ -0.78
PDLIM2-205ENST00000397761 SPINK7P58062 85 aa10.18□□□□□ -0.78
PDLIM2-205ENST00000397761 SPANXA2-OT1Q8N9U9 137 aa10.1□□□□□ -0.79
PDLIM2-205ENST00000397761 HRES1P13985 223 aa10.09□□□□□ -0.79
PDLIM2-205ENST00000397761 MUC17Q685J3 4493 aa10.09□□□□□ -0.79
PDLIM2-205ENST00000397761 TMEM258P61165 79 aa10.08□□□□□ -0.8
PDLIM2-205ENST00000397761 KRTAP4-1Q9BYQ7 146 aa10.02□□□□□ -0.81
PDLIM2-205ENST00000397761 ATP5EP56381 51 aaPredicted RBP9.99□□□□□ -0.81
PDLIM2-205ENST00000397761 FAM236DA0A1B0GTK5 79 aa9.98□□□□□ -0.81
PDLIM2-205ENST00000397761 FAM236CP0DP71 79 aa9.98□□□□□ -0.81
PDLIM2-205ENST00000397761 C4orf26Q17RF5 130 aa9.98□□□□□ -0.81
PDLIM2-205ENST00000397761 MPLKIPQ8TAP9 179 aa9.98□□□□□ -0.81
PDLIM2-205ENST00000397761 MUC2Q02817 5179 aa9.94□□□□□ -0.82
PDLIM2-205ENST00000397761 DMAC1Q96GE9 116 aa9.94□□□□□ -0.82
PDLIM2-205ENST00000397761 COX6B2Q6YFQ2 88 aa9.92□□□□□ -0.82
PDLIM2-205ENST00000397761 KRTAP3-1Q9BYR8 98 aa9.91□□□□□ -0.82
PDLIM2-205ENST00000397761 A8MUN3 132 aa9.89□□□□□ -0.83
PDLIM2-205ENST00000397761 RBM12B-AS1Q9P1G2 102 aa9.84□□□□□ -0.83
PDLIM2-205ENST00000397761 ACYP2P14621 99 aa9.82□□□□□ -0.84
PDLIM2-205ENST00000397761 KRTAP19-2Q3LHN2 52 aa9.79□□□□□ -0.84
PDLIM2-205ENST00000397761 SERP1Q9Y6X1 66 aa9.76□□□□□ -0.85
PDLIM2-205ENST00000397761 COA5Q86WW8 74 aa9.74□□□□□ -0.85
PDLIM2-205ENST00000397761 H1FX-AS1Q4G0G2 97 aa9.72□□□□□ -0.85
PDLIM2-205ENST00000397761 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.86
PDLIM2-205ENST00000397761 RPS28P62857 69 aaKnown RBP9.7□□□□□ -0.86
PDLIM2-205ENST00000397761 CHKB-CPT1BH3BT56 60 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms