RNA–Protein interactions for RNA: ENST00000395878.7

UBFD1-201, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene UBFD1, Length 5,110 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-201ENST00000395878 FRYLO94915 3013 aa9.51□□□□□ -0.89
UBFD1-201ENST00000395878 TACC2O95359 2948 aa9.51□□□□□ -0.89
UBFD1-201ENST00000395878 APCP25054 2843 aa9.5□□□□□ -0.89
UBFD1-201ENST00000395878 REV3LO60673 3130 aa9.48□□□□□ -0.89
UBFD1-201ENST00000395878 BOD1L1Q8NFC6 3051 aa9.48□□□□□ -0.89
UBFD1-201ENST00000395878 KRTAP16-1A8MUX0 517 aa9.46□□□□□ -0.9
UBFD1-201ENST00000395878 KRTAP21-3Q3LHN1 58 aa9.46□□□□□ -0.9
UBFD1-201ENST00000395878 ATMQ13315 3056 aa9.45□□□□□ -0.9
UBFD1-201ENST00000395878 LRBAP50851 2863 aa9.44□□□□□ -0.9
UBFD1-201ENST00000395878 HIVEP1P15822 2718 aa9.44□□□□□ -0.9
UBFD1-201ENST00000395878 NIPBLQ6KC79 2804 aaeCLIP9.42□□□□□ -0.9
UBFD1-201ENST00000395878 SZT2Q5T011 3432 aa9.41□□□□□ -0.9
UBFD1-201ENST00000395878 CFAP47Q6ZTR5 3102 aa9.39□□□□□ -0.91
UBFD1-201ENST00000395878 COL12A1Q99715 3063 aa9.38□□□□□ -0.91
UBFD1-201ENST00000395878 NDUFAF8A1L188 74 aa9.37□□□□□ -0.91
UBFD1-201ENST00000395878 TNP1P09430 55 aa9.37□□□□□ -0.91
UBFD1-201ENST00000395878 COL6A3P12111 3177 aa9.37□□□□□ -0.91
UBFD1-201ENST00000395878 SPEGQ15772 3267 aa9.34□□□□□ -0.91
UBFD1-201ENST00000395878 KRTAP1-4P0C5Y4 121 aa9.34□□□□□ -0.91
UBFD1-201ENST00000395878 TENM4Q6N022 2769 aa9.33□□□□□ -0.92
UBFD1-201ENST00000395878 ZZEF1O43149 2961 aa9.27□□□□□ -0.93
UBFD1-201ENST00000395878 XP32Q5T750 250 aa9.25□□□□□ -0.93
UBFD1-201ENST00000395878 CELSR2Q9HCU4 2923 aa9.23□□□□□ -0.93
UBFD1-201ENST00000395878 PP632Q6XCG6 107 aa9.18□□□□□ -0.94
UBFD1-201ENST00000395878 TNRC18O15417 2968 aaPredicted RBP9.17□□□□□ -0.94
UBFD1-201ENST00000395878 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
UBFD1-201ENST00000395878 DCHS2Q6V1P9 2916 aa9.12□□□□□ -0.95
UBFD1-201ENST00000395878 CRYBG3Q68DQ2 2970 aa9.12□□□□□ -0.95
UBFD1-201ENST00000395878 H0YAA0 97 aa9.11□□□□□ -0.95
UBFD1-201ENST00000395878 TPRXLQ17RH7 258 aa9.08□□□□□ -0.96
UBFD1-201ENST00000395878 ZANQ9Y493 2812 aa9.07□□□□□ -0.96
UBFD1-201ENST00000395878 DMXL1Q9Y485 3027 aa9.07□□□□□ -0.96
UBFD1-201ENST00000395878 EYSQ5T1H1 3165 aa9.04□□□□□ -0.96
UBFD1-201ENST00000395878 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
UBFD1-201ENST00000395878 A0A1B0GVY2 172 aa8.98□□□□□ -0.97
UBFD1-201ENST00000395878 P0C880 135 aa8.95□□□□□ -0.98
UBFD1-201ENST00000395878 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
UBFD1-201ENST00000395878 TENM3Q9P273 2699 aa8.94□□□□□ -0.98
UBFD1-201ENST00000395878 FBN2P35556 2912 aa8.93□□□□□ -0.98
UBFD1-201ENST00000395878 HRNRQ86YZ3 2850 aaPredicted RBP8.93□□□□□ -0.98
UBFD1-201ENST00000395878 MYO15AQ9UKN7 3530 aa8.91□□□□□ -0.98
UBFD1-201ENST00000395878 LOC400499M0QZD8 3231 aa8.89□□□□□ -0.99
UBFD1-201ENST00000395878 USP34Q70CQ2 3546 aa8.88□□□□□ -0.99
UBFD1-201ENST00000395878 TENM1Q9UKZ4 2725 aa8.88□□□□□ -0.99
UBFD1-201ENST00000395878 NF1P21359 2839 aa8.87□□□□□ -0.99
UBFD1-201ENST00000395878 SPTBN5Q9NRC6 3674 aaKnown RBP8.85□□□□□ -0.99
UBFD1-201ENST00000395878 KRTAP10-10P60014 251 aa8.82□□□□□ -1
UBFD1-201ENST00000395878 PRO2289Q9P1D8 64 aa8.76□□□□□ -1.01
UBFD1-201ENST00000395878 TGP01266 2768 aa8.74□□□□□ -1.01
UBFD1-201ENST00000395878 DCHS1Q96JQ0 3298 aa8.74□□□□□ -1.01
UBFD1-201ENST00000395878 TENM2Q9NT68 2774 aa8.74□□□□□ -1.01
UBFD1-201ENST00000395878 WDFY3Q8IZQ1 3526 aa8.73□□□□□ -1.01
UBFD1-201ENST00000395878 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
UBFD1-201ENST00000395878 MXRA5Q9NR99 2828 aa8.61□□□□□ -1.03
UBFD1-201ENST00000395878 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
UBFD1-201ENST00000395878 PDZD2O15018 2839 aa8.54□□□□□ -1.04
UBFD1-201ENST00000395878 ZFHX4Q86UP3 3567 aa8.52□□□□□ -1.05
UBFD1-201ENST00000395878 RELNP78509 3460 aa8.49□□□□□ -1.05
UBFD1-201ENST00000395878 CSMD1Q96PZ7 3565 aa8.47□□□□□ -1.05
UBFD1-201ENST00000395878 PKD1L1Q8TDX9 2849 aa8.47□□□□□ -1.05
UBFD1-201ENST00000395878 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
UBFD1-201ENST00000395878 KRTAP12-1P59990 96 aa8.42□□□□□ -1.06
UBFD1-201ENST00000395878 ASPMQ8IZT6 3477 aa8.41□□□□□ -1.06
UBFD1-201ENST00000395878 KRTAP3-1Q9BYR8 98 aa8.39□□□□□ -1.07
UBFD1-201ENST00000395878 VWFP04275 2813 aa8.35□□□□□ -1.07
UBFD1-201ENST00000395878 DMDP11532 3685 aa8.26□□□□□ -1.09
UBFD1-201ENST00000395878 CUBNO60494 3623 aa8.24□□□□□ -1.09
UBFD1-201ENST00000395878 LAMA5O15230 3695 aa8.24□□□□□ -1.09
UBFD1-201ENST00000395878 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
UBFD1-201ENST00000395878 KRTAP10-6P60371 365 aaPredicted RBP8.18□□□□□ -1.1
UBFD1-201ENST00000395878 MUC3AQ02505 3323 aa8.16□□□□□ -1.1
UBFD1-201ENST00000395878 SVEP1Q4LDE5 3571 aa8.15□□□□□ -1.11
UBFD1-201ENST00000395878 FBN1P35555 2871 aaKnown RBP8.09□□□□□ -1.11
UBFD1-201ENST00000395878 OTOGQ6ZRI0 2925 aa8.06□□□□□ -1.12
UBFD1-201ENST00000395878 KRTAP15-1Q3LI76 137 aa8.05□□□□□ -1.12
UBFD1-201ENST00000395878 FBN3Q75N90 2809 aa8□□□□□ -1.13
UBFD1-201ENST00000395878 SRRM2Q9UQ35 2752 aaKnown RBP8□□□□□ -1.13
UBFD1-201ENST00000395878 ZFHX3Q15911 3703 aa7.96□□□□□ -1.13
UBFD1-201ENST00000395878 NBPF19A0A087WUL8 3843 aa7.95□□□□□ -1.14
UBFD1-201ENST00000395878 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
UBFD1-201ENST00000395878 MEGF8Q7Z7M0 2845 aa7.91□□□□□ -1.14
UBFD1-201ENST00000395878 ANK3Q12955 4377 aaKnown RBP7.89□□□□□ -1.15
UBFD1-201ENST00000395878 KRTAP3-2Q9BYR7 98 aa7.88□□□□□ -1.15
UBFD1-201ENST00000395878 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
UBFD1-201ENST00000395878 SPENQ96T58 3664 aaKnown RBP7.83□□□□□ -1.16
UBFD1-201ENST00000395878 COL7A1Q02388 2944 aa7.76□□□□□ -1.17
UBFD1-201ENST00000395878 KRTAP10-4P60372 401 aaPredicted RBP7.74□□□□□ -1.17
UBFD1-201ENST00000395878 KRTAP10-12P60413 245 aa7.71□□□□□ -1.18
UBFD1-201ENST00000395878 CSMD2Q7Z408 3487 aa7.68□□□□□ -1.18
UBFD1-201ENST00000395878 INE1O15225 51 aa7.67□□□□□ -1.18
UBFD1-201ENST00000395878 KRTAP23-1A1A580 65 aa7.55□□□□□ -1.2
UBFD1-201ENST00000395878 KRTAP4-5Q9BYR2 181 aa7.55□□□□□ -1.2
UBFD1-201ENST00000395878 TRRAPQ9Y4A5 3859 aa7.54□□□□□ -1.2
UBFD1-201ENST00000395878 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
UBFD1-201ENST00000395878 HUWE1Q7Z6Z7 4374 aaKnown RBP7.51□□□□□ -1.21
UBFD1-201ENST00000395878 BSNQ9UPA5 3926 aa7.45□□□□□ -1.22
UBFD1-201ENST00000395878 CRCT1Q9UGL9 99 aa7.43□□□□□ -1.22
UBFD1-201ENST00000395878 LCE3AQ5TA76 89 aa7.4□□□□□ -1.22
UBFD1-201ENST00000395878 ALMS1Q8TCU4 4167 aa7.37□□□□□ -1.23
UBFD1-201ENST00000395878 LORP23490 312 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms