RNA–Protein interactions for RNA: ENST00000395019.3

CTF1-202, Transcript of cardiotrophin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTF1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTF1-202ENST00000395019 MT1HL1P0DM35 61 aa14.1□□□□□ -0.15
CTF1-202ENST00000395019 NDUFB1O75438 58 aa14.08□□□□□ -0.15
CTF1-202ENST00000395019 KRTAP29-1A8MX34 341 aaPredicted RBP14.08□□□□□ -0.16
CTF1-202ENST00000395019 OXTP01178 125 aa14.07□□□□□ -0.16
CTF1-202ENST00000395019 RPS29P62273 56 aaKnown RBP14.07□□□□□ -0.16
CTF1-202ENST00000395019 KRTAP10-8P60410 259 aa14.06□□□□□ -0.16
CTF1-202ENST00000395019 HCG22E2RYF7 251 aa14.04□□□□□ -0.16
CTF1-202ENST00000395019 C1orf195Q5TG92 126 aa14.03□□□□□ -0.16
CTF1-202ENST00000395019 A0A1B0GVX0 72 aa14.01□□□□□ -0.17
CTF1-202ENST00000395019 SMIM20Q8N5G0 67 aa13.97□□□□□ -0.17
CTF1-202ENST00000395019 SERP2Q8N6R1 65 aa13.95□□□□□ -0.18
CTF1-202ENST00000395019 MMP24-AS1A0A0U1RRL7 71 aa13.94□□□□□ -0.18
CTF1-202ENST00000395019 WFDC13Q8IUB5 93 aa13.94□□□□□ -0.18
CTF1-202ENST00000395019 IGHV6-1A0A0B4J1U7 121 aa13.93□□□□□ -0.18
CTF1-202ENST00000395019 J3QL48 77 aa13.93□□□□□ -0.18
CTF1-202ENST00000395019 C8orf17Q9NRJ1 99 aa13.93□□□□□ -0.18
CTF1-202ENST00000395019 CASC2Q6XLA1 102 aa13.92□□□□□ -0.18
CTF1-202ENST00000395019 TRAV7A0A075B6U4 112 aa13.91□□□□□ -0.18
CTF1-202ENST00000395019 COX7CP15954 63 aa13.9□□□□□ -0.18
CTF1-202ENST00000395019 DMBT1Q9UGM3 2413 aaPredicted RBP13.9□□□□□ -0.18
CTF1-202ENST00000395019 OCR1Q9BZK8 76 aa13.88□□□□□ -0.19
CTF1-202ENST00000395019 hDV103S1A0JD37 113 aa13.86□□□□□ -0.19
CTF1-202ENST00000395019 UQCRQO14949 82 aa13.86□□□□□ -0.19
CTF1-202ENST00000395019 C8orf87E5RJ46 101 aa13.84□□□□□ -0.19
CTF1-202ENST00000395019 NOTCH2NLQ7Z3S9 236 aa13.84□□□□□ -0.19
CTF1-202ENST00000395019 CCDC179H3BU77 68 aa13.83□□□□□ -0.2
CTF1-202ENST00000395019 HERC1Q15751 4861 aa13.82□□□□□ -0.2
CTF1-202ENST00000395019 TMEM254Q8TBM7 123 aa13.79□□□□□ -0.2
CTF1-202ENST00000395019 LINC00313P59037 77 aa13.76□□□□□ -0.21
CTF1-202ENST00000395019 MRPL34Q9BQ48 92 aaKnown RBP13.76□□□□□ -0.21
CTF1-202ENST00000395019 C20orf197Q8N268 126 aa13.66□□□□□ -0.22
CTF1-202ENST00000395019 TP53AIP1Q9HCN2 124 aa13.66□□□□□ -0.22
CTF1-202ENST00000395019 RETNLBQ9BQ08 111 aa13.65□□□□□ -0.22
CTF1-202ENST00000395019 KRTAP16-1A8MUX0 517 aa13.64□□□□□ -0.23
CTF1-202ENST00000395019 C5orf47Q569G3 176 aa13.64□□□□□ -0.23
CTF1-202ENST00000395019 NDUFS5O43920 106 aa13.62□□□□□ -0.23
CTF1-202ENST00000395019 Q8N9P0 234 aaPredicted RBP13.6□□□□□ -0.23
CTF1-202ENST00000395019 KLKP1Q107X0 134 aa13.59□□□□□ -0.23
CTF1-202ENST00000395019 A0A0U1RQV1 116 aa13.57□□□□□ -0.24
CTF1-202ENST00000395019 SNURFQ9Y675 71 aa13.55□□□□□ -0.24
CTF1-202ENST00000395019 FP248Q71RG6 208 aaPredicted RBP13.54□□□□□ -0.24
CTF1-202ENST00000395019 CYSTM1Q9H1C7 97 aa13.54□□□□□ -0.24
CTF1-202ENST00000395019 MP68P56378 58 aa13.53□□□□□ -0.24
CTF1-202ENST00000395019 TRAV22A0A0B4J277 110 aa13.53□□□□□ -0.24
CTF1-202ENST00000395019 H0Y9P7 68 aa13.53□□□□□ -0.24
CTF1-202ENST00000395019 HMCN2Q8NDA2 5059 aa13.49□□□□□ -0.25
CTF1-202ENST00000395019 H3BPC8 53 aa13.49□□□□□ -0.25
CTF1-202ENST00000395019 ZCCHC13Q8WW36 166 aaKnown RBP13.47□□□□□ -0.25
CTF1-202ENST00000395019 C9orf92A6NGG3 77 aa13.46□□□□□ -0.25
CTF1-202ENST00000395019 LINC00208Q96KT6 92 aa13.44□□□□□ -0.26
CTF1-202ENST00000395019 LPAP08519 4548 aa13.44□□□□□ -0.26
CTF1-202ENST00000395019 NDUFC1O43677 76 aa13.42□□□□□ -0.26
CTF1-202ENST00000395019 PRR4Q16378 134 aa13.42□□□□□ -0.26
CTF1-202ENST00000395019 KRTAP13-3Q3SY46 172 aa13.42□□□□□ -0.26
CTF1-202ENST00000395019 Q5W150 140 aa13.42□□□□□ -0.26
CTF1-202ENST00000395019 H7BZZ5 65 aa13.41□□□□□ -0.26
CTF1-202ENST00000395019 IGLV7-46A0A075B6I9 117 aa13.4□□□□□ -0.26
CTF1-202ENST00000395019 C1orf64Q8NEQ6 169 aa13.39□□□□□ -0.27
CTF1-202ENST00000395019 C20orf166-AS1Q96NR2 134 aa13.39□□□□□ -0.27
CTF1-202ENST00000395019 A8MUU9 505 aa13.37□□□□□ -0.27
CTF1-202ENST00000395019 TMEM258P61165 79 aa13.33□□□□□ -0.28
CTF1-202ENST00000395019 LOC101927531A0A1B0GV80 90 aa13.28□□□□□ -0.28
CTF1-202ENST00000395019 LRP2P98164 4655 aa13.27□□□□□ -0.28
CTF1-202ENST00000395019 Q75L30 129 aa13.26□□□□□ -0.29
CTF1-202ENST00000395019 IGKV2-30P06310 120 aa13.19□□□□□ -0.3
CTF1-202ENST00000395019 CYP4F30PQ9H0H9 118 aa13.19□□□□□ -0.3
CTF1-202ENST00000395019 FAM236DA0A1B0GTK5 79 aa13.18□□□□□ -0.3
CTF1-202ENST00000395019 FAM236CP0DP71 79 aa13.18□□□□□ -0.3
CTF1-202ENST00000395019 XP32Q5T750 250 aa13.18□□□□□ -0.3
CTF1-202ENST00000395019 TPRXLQ17RH7 258 aa13.17□□□□□ -0.3
CTF1-202ENST00000395019 PCOTHQ58A44 107 aa13.14□□□□□ -0.31
CTF1-202ENST00000395019 ATP5EP56381 51 aaPredicted RBP13.13□□□□□ -0.31
CTF1-202ENST00000395019 RPL37P61927 97 aaKnown RBP13.13□□□□□ -0.31
CTF1-202ENST00000395019 SPANXA2-OT1Q8N9U9 137 aa13.11□□□□□ -0.31
CTF1-202ENST00000395019 IGKV2D-30A0A075B6S6 120 aa13.08□□□□□ -0.32
CTF1-202ENST00000395019 ATP11AUNQ6ZP68 121 aa13.05□□□□□ -0.32
CTF1-202ENST00000395019 C7orf65Q6ZTY9 151 aa13.04□□□□□ -0.32
CTF1-202ENST00000395019 UBR4Q5T4S7 5183 aa12.99□□□□□ -0.33
CTF1-202ENST00000395019 HRES1P13985 223 aa12.97□□□□□ -0.33
CTF1-202ENST00000395019 SPINK7P58062 85 aa12.92□□□□□ -0.34
CTF1-202ENST00000395019 MUC17Q685J3 4493 aa12.92□□□□□ -0.34
CTF1-202ENST00000395019 RPS28P62857 69 aaKnown RBP12.91□□□□□ -0.34
CTF1-202ENST00000395019 SERP1Q9Y6X1 66 aa12.91□□□□□ -0.34
CTF1-202ENST00000395019 DMAC1Q96GE9 116 aa12.79□□□□□ -0.36
CTF1-202ENST00000395019 RNF213Q63HN8 5207 aa12.77□□□□□ -0.37
CTF1-202ENST00000395019 C4orf26Q17RF5 130 aa12.74□□□□□ -0.37
CTF1-202ENST00000395019 ACYP2P14621 99 aa12.72□□□□□ -0.37
CTF1-202ENST00000395019 MUC2Q02817 5179 aa12.72□□□□□ -0.37
CTF1-202ENST00000395019 SEC61BP60468 96 aaKnown RBP12.71□□□□□ -0.37
CTF1-202ENST00000395019 COA5Q86WW8 74 aa12.7□□□□□ -0.38
CTF1-202ENST00000395019 A8MUN3 132 aa12.66□□□□□ -0.38
CTF1-202ENST00000395019 KRTAP4-1Q9BYQ7 146 aa12.66□□□□□ -0.38
CTF1-202ENST00000395019 COX6B2Q6YFQ2 88 aa12.61□□□□□ -0.39
CTF1-202ENST00000395019 KRTAP3-1Q9BYR8 98 aa12.59□□□□□ -0.39
CTF1-202ENST00000395019 SMIM26A0A096LP01 95 aa12.58□□□□□ -0.4
CTF1-202ENST00000395019 CHKB-CPT1BH3BT56 60 aa12.5□□□□□ -0.41
CTF1-202ENST00000395019 MPLKIPQ8TAP9 179 aa12.49□□□□□ -0.41
CTF1-202ENST00000395019 RBM12B-AS1Q9P1G2 102 aa12.4□□□□□ -0.42
CTF1-202ENST00000395019 Q1T7F1 81 aa12.33□□□□□ -0.43
CTF1-202ENST00000395019 H1FX-AS1Q4G0G2 97 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms