RNA–Protein interactions for RNA: ENST00000394320.7

PPARGC1B-203, Transcript of PPARG coactivator 1 beta, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1B, Length 4,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-203ENST00000394320 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
PPARGC1B-203ENST00000394320 ZANQ9Y493 2812 aa8.04□□□□□ -1.12
PPARGC1B-203ENST00000394320 CELSR2Q9HCU4 2923 aa8.03□□□□□ -1.12
PPARGC1B-203ENST00000394320 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
PPARGC1B-203ENST00000394320 A8MUU9 505 aa8.02□□□□□ -1.13
PPARGC1B-203ENST00000394320 CELSR3Q9NYQ7 3312 aa8.01□□□□□ -1.13
PPARGC1B-203ENST00000394320 REV3LO60673 3130 aa8.01□□□□□ -1.13
PPARGC1B-203ENST00000394320 PRAC1Q96KF2 57 aa8□□□□□ -1.13
PPARGC1B-203ENST00000394320 C20orf166-AS1Q96NR2 134 aa8□□□□□ -1.13
PPARGC1B-203ENST00000394320 DCHS2Q6V1P9 2916 aa7.96□□□□□ -1.14
PPARGC1B-203ENST00000394320 VCANP13611 3396 aa7.96□□□□□ -1.14
PPARGC1B-203ENST00000394320 HRNRQ86YZ3 2850 aaPredicted RBP7.94□□□□□ -1.14
PPARGC1B-203ENST00000394320 ASH1LQ9NR48 2969 aaKnown RBP7.94□□□□□ -1.14
PPARGC1B-203ENST00000394320 KRTAP1-4P0C5Y4 121 aa7.93□□□□□ -1.14
PPARGC1B-203ENST00000394320 COL6A3P12111 3177 aa7.9□□□□□ -1.14
PPARGC1B-203ENST00000394320 CRYBG3Q68DQ2 2970 aa7.88□□□□□ -1.15
PPARGC1B-203ENST00000394320 DMXL1Q9Y485 3027 aa7.86□□□□□ -1.15
PPARGC1B-203ENST00000394320 FREM2Q5SZK8 3169 aa7.83□□□□□ -1.16
PPARGC1B-203ENST00000394320 NF1P21359 2839 aa7.82□□□□□ -1.16
PPARGC1B-203ENST00000394320 XP32Q5T750 250 aa7.78□□□□□ -1.16
PPARGC1B-203ENST00000394320 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
PPARGC1B-203ENST00000394320 A0A0A0MQY5 61 aa7.76□□□□□ -1.17
PPARGC1B-203ENST00000394320 TENM3Q9P273 2699 aa7.74□□□□□ -1.17
PPARGC1B-203ENST00000394320 A8MU10 97 aa7.73□□□□□ -1.17
PPARGC1B-203ENST00000394320 FBN2P35556 2912 aa7.73□□□□□ -1.17
PPARGC1B-203ENST00000394320 MXRA5Q9NR99 2828 aa7.73□□□□□ -1.17
PPARGC1B-203ENST00000394320 A6NN06 94 aa7.72□□□□□ -1.17
PPARGC1B-203ENST00000394320 DNAH14Q0VDD8 3507 aa7.72□□□□□ -1.17
PPARGC1B-203ENST00000394320 TENM1Q9UKZ4 2725 aa7.71□□□□□ -1.17
PPARGC1B-203ENST00000394320 USP34Q70CQ2 3546 aa7.7□□□□□ -1.18
PPARGC1B-203ENST00000394320 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
PPARGC1B-203ENST00000394320 CFAP47Q6ZTR5 3102 aa7.65□□□□□ -1.18
PPARGC1B-203ENST00000394320 KRTAP16-1A8MUX0 517 aa7.65□□□□□ -1.19
PPARGC1B-203ENST00000394320 TNP1P09430 55 aa7.62□□□□□ -1.19
PPARGC1B-203ENST00000394320 A0A1B0GVY2 172 aa7.61□□□□□ -1.19
PPARGC1B-203ENST00000394320 TENM2Q9NT68 2774 aa7.61□□□□□ -1.19
PPARGC1B-203ENST00000394320 KRTAP13-3Q3SY46 172 aa7.59□□□□□ -1.19
PPARGC1B-203ENST00000394320 SPTBN5Q9NRC6 3674 aaKnown RBP7.59□□□□□ -1.19
PPARGC1B-203ENST00000394320 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
PPARGC1B-203ENST00000394320 LOC400499M0QZD8 3231 aa7.54□□□□□ -1.2
PPARGC1B-203ENST00000394320 CELSR1Q9NYQ6 3014 aa7.54□□□□□ -1.2
PPARGC1B-203ENST00000394320 PDZD2O15018 2839 aa7.52□□□□□ -1.2
PPARGC1B-203ENST00000394320 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
PPARGC1B-203ENST00000394320 SPEGQ15772 3267 aa7.47□□□□□ -1.21
PPARGC1B-203ENST00000394320 H3BS24 57 aa7.44□□□□□ -1.22
PPARGC1B-203ENST00000394320 PKD1L1Q8TDX9 2849 aa7.37□□□□□ -1.23
PPARGC1B-203ENST00000394320 TGP01266 2768 aa7.36□□□□□ -1.23
PPARGC1B-203ENST00000394320 H0YAA0 97 aa7.35□□□□□ -1.23
PPARGC1B-203ENST00000394320 KRTAP10-10P60014 251 aa7.32□□□□□ -1.24
PPARGC1B-203ENST00000394320 OTOGQ6ZRI0 2925 aa7.31□□□□□ -1.24
PPARGC1B-203ENST00000394320 PRO2289Q9P1D8 64 aa7.29□□□□□ -1.24
PPARGC1B-203ENST00000394320 P0C880 135 aa7.25□□□□□ -1.25
PPARGC1B-203ENST00000394320 DCHS1Q96JQ0 3298 aa7.25□□□□□ -1.25
PPARGC1B-203ENST00000394320 VWFP04275 2813 aa7.19□□□□□ -1.26
PPARGC1B-203ENST00000394320 C10orf95Q9H7T3 257 aa7.19□□□□□ -1.26
PPARGC1B-203ENST00000394320 MYO15AQ9UKN7 3530 aa7.19□□□□□ -1.26
PPARGC1B-203ENST00000394320 NDUFAF8A1L188 74 aa7.16□□□□□ -1.26
PPARGC1B-203ENST00000394320 RELNP78509 3460 aa7.15□□□□□ -1.26
PPARGC1B-203ENST00000394320 FBN1P35555 2871 aaKnown RBP7.12□□□□□ -1.27
PPARGC1B-203ENST00000394320 WDFY3Q8IZQ1 3526 aa7.03□□□□□ -1.28
PPARGC1B-203ENST00000394320 ANK3Q12955 4377 aaKnown RBP7□□□□□ -1.29
PPARGC1B-203ENST00000394320 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
PPARGC1B-203ENST00000394320 NBPF19A0A087WUL8 3843 aa6.94□□□□□ -1.3
PPARGC1B-203ENST00000394320 MT1HL1P0DM35 61 aa6.92□□□□□ -1.3
PPARGC1B-203ENST00000394320 FBN3Q75N90 2809 aa6.92□□□□□ -1.3
PPARGC1B-203ENST00000394320 KRTAP13-4Q3LI77 160 aa6.91□□□□□ -1.3
PPARGC1B-203ENST00000394320 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
PPARGC1B-203ENST00000394320 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
PPARGC1B-203ENST00000394320 SRRM2Q9UQ35 2752 aaKnown RBP6.87□□□□□ -1.31
PPARGC1B-203ENST00000394320 MEGF8Q7Z7M0 2845 aa6.86□□□□□ -1.31
PPARGC1B-203ENST00000394320 LAMA5O15230 3695 aa6.84□□□□□ -1.31
PPARGC1B-203ENST00000394320 ZFHX3Q15911 3703 aa6.83□□□□□ -1.32
PPARGC1B-203ENST00000394320 KRTAP10-4P60372 401 aaPredicted RBP6.81□□□□□ -1.32
PPARGC1B-203ENST00000394320 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
PPARGC1B-203ENST00000394320 ASPMQ8IZT6 3477 aa6.76□□□□□ -1.33
PPARGC1B-203ENST00000394320 COL7A1Q02388 2944 aa6.7□□□□□ -1.34
PPARGC1B-203ENST00000394320 MUC3AQ02505 3323 aa6.68□□□□□ -1.34
PPARGC1B-203ENST00000394320 ZFHX4Q86UP3 3567 aa6.67□□□□□ -1.34
PPARGC1B-203ENST00000394320 TRRAPQ9Y4A5 3859 aa6.61□□□□□ -1.35
PPARGC1B-203ENST00000394320 DMDP11532 3685 aa6.59□□□□□ -1.36
PPARGC1B-203ENST00000394320 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
PPARGC1B-203ENST00000394320 KRTAP4-5Q9BYR2 181 aa6.56□□□□□ -1.36
PPARGC1B-203ENST00000394320 HUWE1Q7Z6Z7 4374 aaKnown RBP6.56□□□□□ -1.36
PPARGC1B-203ENST00000394320 KRTAP3-2Q9BYR7 98 aa6.55□□□□□ -1.36
PPARGC1B-203ENST00000394320 CSMD1Q96PZ7 3565 aa6.53□□□□□ -1.36
PPARGC1B-203ENST00000394320 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
PPARGC1B-203ENST00000394320 ALMS1Q8TCU4 4167 aa6.51□□□□□ -1.37
PPARGC1B-203ENST00000394320 CSMD2Q7Z408 3487 aa6.51□□□□□ -1.37
PPARGC1B-203ENST00000394320 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
PPARGC1B-203ENST00000394320 SPENQ96T58 3664 aaKnown RBP6.41□□□□□ -1.38
PPARGC1B-203ENST00000394320 BSNQ9UPA5 3926 aa6.38□□□□□ -1.39
PPARGC1B-203ENST00000394320 KRTAP10-12P60413 245 aa6.36□□□□□ -1.39
PPARGC1B-203ENST00000394320 CUBNO60494 3623 aa6.36□□□□□ -1.39
PPARGC1B-203ENST00000394320 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
PPARGC1B-203ENST00000394320 SVEP1Q4LDE5 3571 aa6.32□□□□□ -1.4
PPARGC1B-203ENST00000394320 DNAH9Q9NYC9 4486 aa6.31□□□□□ -1.4
PPARGC1B-203ENST00000394320 DNAH5Q8TE73 4624 aa6.23□□□□□ -1.41
PPARGC1B-203ENST00000394320 DNAH10Q8IVF4 4471 aa6.22□□□□□ -1.41
PPARGC1B-203ENST00000394320 DNAH11Q96DT5 4516 aa6.19□□□□□ -1.42
PPARGC1B-203ENST00000394320 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms