RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 POLQO75417 2590 aa1.44□□□□□ -2.18
PHF3-202ENST00000393387 KRTAP10-7P60409 375 aaPredicted RBP1.44□□□□□ -2.18
PHF3-202ENST00000393387 AHNAKQ09666 5890 aaKnown RBP1.44□□□□□ -2.18
PHF3-202ENST00000393387 FASNP49327 2511 aaKnown RBP1.44□□□□□ -2.18
PHF3-202ENST00000393387 CHD7Q9P2D1 2997 aa1.44□□□□□ -2.18
PHF3-202ENST00000393387 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
PHF3-202ENST00000393387 LCE5AQ5TCM9 118 aa1.43□□□□□ -2.18
PHF3-202ENST00000393387 PRRC2CQ9Y520 2896 aaKnown RBP1.43□□□□□ -2.18
PHF3-202ENST00000393387 LCE1DQ5T752 114 aa1.42□□□□□ -2.18
PHF3-202ENST00000393387 RNF213Q63HN8 5207 aa1.42□□□□□ -2.18
PHF3-202ENST00000393387 MAP1AP78559 2803 aaPredicted RBP1.42□□□□□ -2.18
PHF3-202ENST00000393387 DNAH17Q9UFH2 4485 aa1.42□□□□□ -2.18
PHF3-202ENST00000393387 STAB2Q8WWQ8 2551 aa1.42□□□□□ -2.18
PHF3-202ENST00000393387 HERC1Q15751 4861 aa1.42□□□□□ -2.18
PHF3-202ENST00000393387 CHD9Q3L8U1 2897 aa1.42□□□□□ -2.18
PHF3-202ENST00000393387 LRP2P98164 4655 aa1.41□□□□□ -2.18
PHF3-202ENST00000393387 HERC2O95714 4834 aa1.41□□□□□ -2.18
PHF3-202ENST00000393387 HTTP42858 3142 aa1.4□□□□□ -2.19
PHF3-202ENST00000393387 RELNP78509 3460 aa1.4□□□□□ -2.19
PHF3-202ENST00000393387 TRANK1O15050 2925 aa1.4□□□□□ -2.19
PHF3-202ENST00000393387 ASH1LQ9NR48 2969 aaKnown RBP1.39□□□□□ -2.19
PHF3-202ENST00000393387 CENPFP49454 3210 aa1.39□□□□□ -2.19
PHF3-202ENST00000393387 BSNQ9UPA5 3926 aa1.39□□□□□ -2.19
PHF3-202ENST00000393387 STAB1Q9NY15 2570 aa1.39□□□□□ -2.19
PHF3-202ENST00000393387 KRTAP4-9Q9BYQ8 210 aa1.39□□□□□ -2.19
PHF3-202ENST00000393387 SPTBN5Q9NRC6 3674 aaKnown RBP1.39□□□□□ -2.19
PHF3-202ENST00000393387 LCE4AQ5TA78 99 aa1.38□□□□□ -2.19
PHF3-202ENST00000393387 HELZ2Q9BYK8 2649 aaKnown RBP1.38□□□□□ -2.19
PHF3-202ENST00000393387 UTRNP46939 3433 aa1.38□□□□□ -2.19
PHF3-202ENST00000393387 USP9YO00507 2555 aaPredicted RBP1.38□□□□□ -2.19
PHF3-202ENST00000393387 FREM2Q5SZK8 3169 aa1.38□□□□□ -2.19
PHF3-202ENST00000393387 CENPEQ02224 2701 aa1.38□□□□□ -2.19
PHF3-202ENST00000393387 HMCN1Q96RW7 5635 aa1.38□□□□□ -2.19
PHF3-202ENST00000393387 NBEAL1Q6ZS30 2694 aa1.37□□□□□ -2.19
PHF3-202ENST00000393387 ZFHX4Q86UP3 3567 aa1.37□□□□□ -2.19
PHF3-202ENST00000393387 NOTCH1P46531 2555 aa1.37□□□□□ -2.19
PHF3-202ENST00000393387 KRTAP10-4P60372 401 aaPredicted RBP1.37□□□□□ -2.19
PHF3-202ENST00000393387 BAHCC1Q9P281 2608 aa1.37□□□□□ -2.19
PHF3-202ENST00000393387 HECTD1Q9ULT8 2610 aa1.37□□□□□ -2.19
PHF3-202ENST00000393387 FBN3Q75N90 2809 aa1.36□□□□□ -2.19
PHF3-202ENST00000393387 KRTAP4-2Q9BYR5 136 aa1.36□□□□□ -2.19
PHF3-202ENST00000393387 USH2AO75445 5202 aa1.36□□□□□ -2.19
PHF3-202ENST00000393387 ZFHX3Q15911 3703 aa1.36□□□□□ -2.19
PHF3-202ENST00000393387 LCE1AQ5T7P2 110 aa1.36□□□□□ -2.19
PHF3-202ENST00000393387 CEP295Q9C0D2 2601 aa1.35□□□□□ -2.19
PHF3-202ENST00000393387 USP24Q9UPU5 2620 aa1.35□□□□□ -2.19
PHF3-202ENST00000393387 A0A0C4DFX4 3053 aa1.34□□□□□ -2.19
PHF3-202ENST00000393387 COL6A5A8TX70 2615 aa1.34□□□□□ -2.19
PHF3-202ENST00000393387 FLNBO75369 2602 aaKnown RBP1.34□□□□□ -2.19
PHF3-202ENST00000393387 MT3P25713 68 aa1.34□□□□□ -2.2
PHF3-202ENST00000393387 UNC79Q9P2D8 2635 aa1.33□□□□□ -2.2
PHF3-202ENST00000393387 KRTAP4-5Q9BYR2 181 aa1.33□□□□□ -2.2
PHF3-202ENST00000393387 ITPR1Q14643 2758 aa1.33□□□□□ -2.2
PHF3-202ENST00000393387 REV3LO60673 3130 aa1.33□□□□□ -2.2
PHF3-202ENST00000393387 GOLGB1Q14789 3259 aaKnown RBP1.33□□□□□ -2.2
PHF3-202ENST00000393387 C5orf42Q9H799 3197 aa1.33□□□□□ -2.2
PHF3-202ENST00000393387 MGAQ8IWI9 3026 aa1.32□□□□□ -2.2
PHF3-202ENST00000393387 CFAP46Q8IYW2 2715 aa1.32□□□□□ -2.2
PHF3-202ENST00000393387 EP400Q96L91 3159 aa1.32□□□□□ -2.2
PHF3-202ENST00000393387 MAST4O15021 2626 aa1.32□□□□□ -2.2
PHF3-202ENST00000393387 NBEAL2Q6ZNJ1 2754 aa1.31□□□□□ -2.2
PHF3-202ENST00000393387 PCNTO95613 3336 aa1.31□□□□□ -2.2
PHF3-202ENST00000393387 KRTAP4-11Q9BYQ6 195 aa1.31□□□□□ -2.2
PHF3-202ENST00000393387 UBR5O95071 2799 aaPredicted RBP1.31□□□□□ -2.2
PHF3-202ENST00000393387 CHD6Q8TD26 2715 aa1.31□□□□□ -2.2
PHF3-202ENST00000393387 ITPR3Q14573 2671 aa1.3□□□□□ -2.2
PHF3-202ENST00000393387 DYNC2H1Q8NCM8 4307 aaKnown RBP1.3□□□□□ -2.2
PHF3-202ENST00000393387 GCN1Q92616 2671 aaKnown RBP1.3□□□□□ -2.2
PHF3-202ENST00000393387 COL6A3P12111 3177 aa1.3□□□□□ -2.2
PHF3-202ENST00000393387 CFAP54Q96N23 3096 aa1.3□□□□□ -2.2
PHF3-202ENST00000393387 LRP1BQ9NZR2 4599 aa1.3□□□□□ -2.2
PHF3-202ENST00000393387 KRTAP8-1Q8IUC2 63 aa1.3□□□□□ -2.2
PHF3-202ENST00000393387 DNAH11Q96DT5 4516 aa1.29□□□□□ -2.2
PHF3-202ENST00000393387 NSD1Q96L73 2696 aaPredicted RBP1.29□□□□□ -2.2
PHF3-202ENST00000393387 RANBP2P49792 3224 aaKnown RBP1.29□□□□□ -2.2
PHF3-202ENST00000393387 KRTAP5-3Q6L8H2 238 aa1.29□□□□□ -2.2
PHF3-202ENST00000393387 TGP01266 2768 aa1.29□□□□□ -2.2
PHF3-202ENST00000393387 NBPF19A0A087WUL8 3843 aa1.29□□□□□ -2.2
PHF3-202ENST00000393387 KMT2DO14686 5537 aa1.28□□□□□ -2.2
PHF3-202ENST00000393387 ANKRD11Q6UB99 2663 aaPredicted RBP1.28□□□□□ -2.2
PHF3-202ENST00000393387 FLNAP21333 2647 aaKnown RBP1.28□□□□□ -2.2
PHF3-202ENST00000393387 ATRQ13535 2644 aa1.28□□□□□ -2.2
PHF3-202ENST00000393387 IGSF10Q6WRI0 2623 aa1.28□□□□□ -2.2
PHF3-202ENST00000393387 ALMS1Q8TCU4 4167 aa1.28□□□□□ -2.2
PHF3-202ENST00000393387 ANK2Q01484 3957 aa1.28□□□□□ -2.21
PHF3-202ENST00000393387 SPENQ96T58 3664 aaKnown RBP1.27□□□□□ -2.21
PHF3-202ENST00000393387 SETXQ7Z333 2677 aaKnown RBP1.27□□□□□ -2.21
PHF3-202ENST00000393387 HUWE1Q7Z6Z7 4374 aaKnown RBP1.27□□□□□ -2.21
PHF3-202ENST00000393387 CEP350Q5VT06 3117 aa1.27□□□□□ -2.21
PHF3-202ENST00000393387 CFAP47Q6ZTR5 3102 aa1.27□□□□□ -2.21
PHF3-202ENST00000393387 WDFY4Q6ZS81 3184 aa1.26□□□□□ -2.21
PHF3-202ENST00000393387 MUC2Q02817 5179 aa1.26□□□□□ -2.21
PHF3-202ENST00000393387 MKI67P46013 3256 aaKnown RBP1.26□□□□□ -2.21
PHF3-202ENST00000393387 MEGF8Q7Z7M0 2845 aa1.26□□□□□ -2.21
PHF3-202ENST00000393387 PKHD1L1Q86WI1 4243 aa1.26□□□□□ -2.21
PHF3-202ENST00000393387 NBEAQ8NFP9 2946 aa1.25□□□□□ -2.21
PHF3-202ENST00000393387 KRTAP19-5Q3LI72 72 aa1.25□□□□□ -2.21
PHF3-202ENST00000393387 KRTAP12-4P60329 112 aa1.25□□□□□ -2.21
PHF3-202ENST00000393387 DNAH3Q8TD57 4116 aa1.25□□□□□ -2.21
PHF3-202ENST00000393387 APCP25054 2843 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms