RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 MAP1AP78559 2803 aaPredicted RBP3.2□□□□□ -1.9
GTDC1-204ENST00000392869 XP32Q5T750 250 aa3.2□□□□□ -1.9
GTDC1-204ENST00000392869 VPS13AQ96RL7 3174 aa3.2□□□□□ -1.9
GTDC1-204ENST00000392869 APCP25054 2843 aa3.2□□□□□ -1.9
GTDC1-204ENST00000392869 NBEAL2Q6ZNJ1 2754 aa3.19□□□□□ -1.9
GTDC1-204ENST00000392869 ASPMQ8IZT6 3477 aa3.19□□□□□ -1.9
GTDC1-204ENST00000392869 IGSF10Q6WRI0 2623 aa3.19□□□□□ -1.9
GTDC1-204ENST00000392869 CELSR3Q9NYQ7 3312 aa3.18□□□□□ -1.9
GTDC1-204ENST00000392869 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
GTDC1-204ENST00000392869 VCANP13611 3396 aa3.18□□□□□ -1.9
GTDC1-204ENST00000392869 STAB2Q8WWQ8 2551 aa3.18□□□□□ -1.9
GTDC1-204ENST00000392869 UTP20O75691 2785 aaKnown RBP3.17□□□□□ -1.9
GTDC1-204ENST00000392869 FRYQ5TBA9 3013 aa3.17□□□□□ -1.9
GTDC1-204ENST00000392869 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
GTDC1-204ENST00000392869 DSPP15924 2871 aaKnown RBP3.16□□□□□ -1.9
GTDC1-204ENST00000392869 FREM2Q5SZK8 3169 aa3.16□□□□□ -1.9
GTDC1-204ENST00000392869 WDFY4Q6ZS81 3184 aa3.16□□□□□ -1.9
GTDC1-204ENST00000392869 PRUNE2Q8WUY3 3088 aa3.16□□□□□ -1.9
GTDC1-204ENST00000392869 SPENQ96T58 3664 aaKnown RBP3.15□□□□□ -1.91
GTDC1-204ENST00000392869 LRBAP50851 2863 aa3.14□□□□□ -1.91
GTDC1-204ENST00000392869 LOC400499M0QZD8 3231 aa3.14□□□□□ -1.91
GTDC1-204ENST00000392869 ZFHX4Q86UP3 3567 aa3.13□□□□□ -1.91
GTDC1-204ENST00000392869 KRTAP23-1A1A580 65 aa3.11□□□□□ -1.91
GTDC1-204ENST00000392869 KRTAP1-4P0C5Y4 121 aa3.11□□□□□ -1.91
GTDC1-204ENST00000392869 ITPR1Q14643 2758 aa3.1□□□□□ -1.91
GTDC1-204ENST00000392869 KALRNO60229 2985 aa3.1□□□□□ -1.91
GTDC1-204ENST00000392869 KRTAP13-3Q3SY46 172 aa3.08□□□□□ -1.92
GTDC1-204ENST00000392869 UBR5O95071 2799 aaPredicted RBP3.07□□□□□ -1.92
GTDC1-204ENST00000392869 DMDP11532 3685 aa3.07□□□□□ -1.92
GTDC1-204ENST00000392869 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
GTDC1-204ENST00000392869 FRYLO94915 3013 aa3.06□□□□□ -1.92
GTDC1-204ENST00000392869 LAMA1P25391 3075 aa3.06□□□□□ -1.92
GTDC1-204ENST00000392869 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
GTDC1-204ENST00000392869 FLNCQ14315 2725 aa3.06□□□□□ -1.92
GTDC1-204ENST00000392869 LAMA5O15230 3695 aa3.04□□□□□ -1.92
GTDC1-204ENST00000392869 CRYBG3Q68DQ2 2970 aa3.02□□□□□ -1.93
GTDC1-204ENST00000392869 KRTAP12-1P59990 96 aa3.01□□□□□ -1.93
GTDC1-204ENST00000392869 HIVEP1P15822 2718 aa3.01□□□□□ -1.93
GTDC1-204ENST00000392869 BOD1L1Q8NFC6 3051 aa2.99□□□□□ -1.93
GTDC1-204ENST00000392869 CFAP47Q6ZTR5 3102 aa2.99□□□□□ -1.93
GTDC1-204ENST00000392869 A0A1B0GVY2 172 aa2.98□□□□□ -1.93
GTDC1-204ENST00000392869 ASH1LQ9NR48 2969 aaKnown RBP2.98□□□□□ -1.93
GTDC1-204ENST00000392869 KRTAP15-1Q3LI76 137 aa2.98□□□□□ -1.93
GTDC1-204ENST00000392869 TACC2O95359 2948 aa2.98□□□□□ -1.93
GTDC1-204ENST00000392869 ATMQ13315 3056 aa2.96□□□□□ -1.94
GTDC1-204ENST00000392869 COL12A1Q99715 3063 aa2.95□□□□□ -1.94
GTDC1-204ENST00000392869 ZZEF1O43149 2961 aa2.95□□□□□ -1.94
GTDC1-204ENST00000392869 ADGRG4Q8IZF6 3080 aa2.95□□□□□ -1.94
GTDC1-204ENST00000392869 CSMD1Q96PZ7 3565 aa2.95□□□□□ -1.94
GTDC1-204ENST00000392869 NBEAQ8NFP9 2946 aa2.95□□□□□ -1.94
GTDC1-204ENST00000392869 SMG1Q96Q15 3661 aaKnown RBP2.95□□□□□ -1.94
GTDC1-204ENST00000392869 DMXL2Q8TDJ6 3036 aa2.94□□□□□ -1.94
GTDC1-204ENST00000392869 NIPBLQ6KC79 2804 aaeCLIP2.94□□□□□ -1.94
GTDC1-204ENST00000392869 CUBNO60494 3623 aa2.93□□□□□ -1.94
GTDC1-204ENST00000392869 DMXL1Q9Y485 3027 aa2.93□□□□□ -1.94
GTDC1-204ENST00000392869 HRNRQ86YZ3 2850 aaPredicted RBP2.92□□□□□ -1.94
GTDC1-204ENST00000392869 CELSR2Q9HCU4 2923 aa2.92□□□□□ -1.94
GTDC1-204ENST00000392869 TNRC18O15417 2968 aaPredicted RBP2.91□□□□□ -1.94
GTDC1-204ENST00000392869 NBPF19A0A087WUL8 3843 aa2.91□□□□□ -1.94
GTDC1-204ENST00000392869 TENM1Q9UKZ4 2725 aa2.89□□□□□ -1.95
GTDC1-204ENST00000392869 TGP01266 2768 aa2.89□□□□□ -1.95
GTDC1-204ENST00000392869 CSMD2Q7Z408 3487 aa2.88□□□□□ -1.95
GTDC1-204ENST00000392869 DCHS2Q6V1P9 2916 aa2.88□□□□□ -1.95
GTDC1-204ENST00000392869 EYSQ5T1H1 3165 aa2.88□□□□□ -1.95
GTDC1-204ENST00000392869 NF1P21359 2839 aa2.87□□□□□ -1.95
GTDC1-204ENST00000392869 MUC3AQ02505 3323 aa2.87□□□□□ -1.95
GTDC1-204ENST00000392869 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
GTDC1-204ENST00000392869 CELSR1Q9NYQ6 3014 aa2.86□□□□□ -1.95
GTDC1-204ENST00000392869 TENM4Q6N022 2769 aa2.85□□□□□ -1.95
GTDC1-204ENST00000392869 ZANQ9Y493 2812 aa2.85□□□□□ -1.95
GTDC1-204ENST00000392869 TENM3Q9P273 2699 aa2.85□□□□□ -1.95
GTDC1-204ENST00000392869 FBN2P35556 2912 aa2.83□□□□□ -1.96
GTDC1-204ENST00000392869 KRTAP10-12P60413 245 aa2.82□□□□□ -1.96
GTDC1-204ENST00000392869 SVEP1Q4LDE5 3571 aa2.82□□□□□ -1.96
GTDC1-204ENST00000392869 KRTAP10-6P60371 365 aaPredicted RBP2.81□□□□□ -1.96
GTDC1-204ENST00000392869 AKAP9Q99996 3911 aa2.8□□□□□ -1.96
GTDC1-204ENST00000392869 MXRA5Q9NR99 2828 aa2.8□□□□□ -1.96
GTDC1-204ENST00000392869 KRTAP3-1Q9BYR8 98 aa2.77□□□□□ -1.97
GTDC1-204ENST00000392869 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
GTDC1-204ENST00000392869 BSNQ9UPA5 3926 aa2.73□□□□□ -1.97
GTDC1-204ENST00000392869 PDZD2O15018 2839 aa2.72□□□□□ -1.97
GTDC1-204ENST00000392869 TENM2Q9NT68 2774 aa2.72□□□□□ -1.97
GTDC1-204ENST00000392869 VWFP04275 2813 aa2.71□□□□□ -1.98
GTDC1-204ENST00000392869 VPS13CQ709C8 3753 aa2.7□□□□□ -1.98
GTDC1-204ENST00000392869 PKD1L1Q8TDX9 2849 aa2.68□□□□□ -1.98
GTDC1-204ENST00000392869 ALMS1Q8TCU4 4167 aa2.67□□□□□ -1.98
GTDC1-204ENST00000392869 ZNF469Q96JG9 3925 aaPredicted RBP2.67□□□□□ -1.98
GTDC1-204ENST00000392869 KRTAP3-2Q9BYR7 98 aa2.64□□□□□ -1.99
GTDC1-204ENST00000392869 TRRAPQ9Y4A5 3859 aa2.64□□□□□ -1.99
GTDC1-204ENST00000392869 KRTAP3-3Q9BYR6 98 aa2.62□□□□□ -1.99
GTDC1-204ENST00000392869 ANK3Q12955 4377 aaKnown RBP2.61□□□□□ -1.99
GTDC1-204ENST00000392869 LYSTQ99698 3801 aa2.6□□□□□ -1.99
GTDC1-204ENST00000392869 FRAS1Q86XX4 4008 aa2.59□□□□□ -1.99
GTDC1-204ENST00000392869 MEGF8Q7Z7M0 2845 aa2.57□□□□□ -2
GTDC1-204ENST00000392869 LCE3AQ5TA76 89 aa2.55□□□□□ -2
GTDC1-204ENST00000392869 FBN1P35555 2871 aaKnown RBP2.55□□□□□ -2
GTDC1-204ENST00000392869 ANK2Q01484 3957 aa2.55□□□□□ -2
GTDC1-204ENST00000392869 SRRM2Q9UQ35 2752 aaKnown RBP2.54□□□□□ -2
GTDC1-204ENST00000392869 COL7A1Q02388 2944 aa2.54□□□□□ -2
GTDC1-204ENST00000392869 HUWE1Q7Z6Z7 4374 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms