RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 IGSF10Q6WRI0 2623 aa8.12□□□□□ -1.11
ALK-201ENST00000389048 CRYBG3Q68DQ2 2970 aa8.11□□□□□ -1.11
ALK-201ENST00000389048 KRTAP21-3Q3LHN1 58 aa8.11□□□□□ -1.11
ALK-201ENST00000389048 TRANK1O15050 2925 aa8.11□□□□□ -1.11
ALK-201ENST00000389048 MAP1AP78559 2803 aaPredicted RBP8.07□□□□□ -1.12
ALK-201ENST00000389048 DMXL2Q8TDJ6 3036 aa8.07□□□□□ -1.12
ALK-201ENST00000389048 KRTAP1-4P0C5Y4 121 aa8.06□□□□□ -1.12
ALK-201ENST00000389048 SPEGQ15772 3267 aa8.06□□□□□ -1.12
ALK-201ENST00000389048 LRBAP50851 2863 aa8.04□□□□□ -1.12
ALK-201ENST00000389048 ASH1LQ9NR48 2969 aaKnown RBP8.04□□□□□ -1.12
ALK-201ENST00000389048 APCP25054 2843 aa8.03□□□□□ -1.12
ALK-201ENST00000389048 ITPR2Q14571 2701 aa8.01□□□□□ -1.13
ALK-201ENST00000389048 LAMA1P25391 3075 aa8□□□□□ -1.13
ALK-201ENST00000389048 UBR5O95071 2799 aaPredicted RBP7.98□□□□□ -1.13
ALK-201ENST00000389048 MYO15AQ9UKN7 3530 aa7.98□□□□□ -1.13
ALK-201ENST00000389048 NSD1Q96L73 2696 aaPredicted RBP7.97□□□□□ -1.13
ALK-201ENST00000389048 HIVEP1P15822 2718 aa7.92□□□□□ -1.14
ALK-201ENST00000389048 BOD1L1Q8NFC6 3051 aa7.91□□□□□ -1.14
ALK-201ENST00000389048 TACC2O95359 2948 aa7.9□□□□□ -1.14
ALK-201ENST00000389048 PRO2289Q9P1D8 64 aa7.89□□□□□ -1.15
ALK-201ENST00000389048 KRTAP12-2P59991 146 aa7.88□□□□□ -1.15
ALK-201ENST00000389048 USP34Q70CQ2 3546 aa7.87□□□□□ -1.15
ALK-201ENST00000389048 EYSQ5T1H1 3165 aa7.85□□□□□ -1.15
ALK-201ENST00000389048 UTP20O75691 2785 aaKnown RBP7.85□□□□□ -1.15
ALK-201ENST00000389048 SPTBN5Q9NRC6 3674 aaKnown RBP7.84□□□□□ -1.15
ALK-201ENST00000389048 ATMQ13315 3056 aa7.83□□□□□ -1.16
ALK-201ENST00000389048 TPRXLQ17RH7 258 aa7.83□□□□□ -1.16
ALK-201ENST00000389048 ITPR1Q14643 2758 aa7.82□□□□□ -1.16
ALK-201ENST00000389048 FRYLO94915 3013 aa7.82□□□□□ -1.16
ALK-201ENST00000389048 KMT2BQ9UMN6 2715 aaPredicted RBP7.82□□□□□ -1.16
ALK-201ENST00000389048 COL12A1Q99715 3063 aa7.81□□□□□ -1.16
ALK-201ENST00000389048 NBEAQ8NFP9 2946 aa7.79□□□□□ -1.16
ALK-201ENST00000389048 KRTAP13-3Q3SY46 172 aa7.79□□□□□ -1.16
ALK-201ENST00000389048 ADGRG4Q8IZF6 3080 aa7.78□□□□□ -1.16
ALK-201ENST00000389048 WDFY3Q8IZQ1 3526 aa7.74□□□□□ -1.17
ALK-201ENST00000389048 TENM4Q6N022 2769 aa7.71□□□□□ -1.17
ALK-201ENST00000389048 ZZEF1O43149 2961 aa7.71□□□□□ -1.18
ALK-201ENST00000389048 DCHS1Q96JQ0 3298 aa7.69□□□□□ -1.18
ALK-201ENST00000389048 ASPMQ8IZT6 3477 aa7.64□□□□□ -1.19
ALK-201ENST00000389048 FLNCQ14315 2725 aa7.62□□□□□ -1.19
ALK-201ENST00000389048 LOC400499M0QZD8 3231 aa7.58□□□□□ -1.2
ALK-201ENST00000389048 CELSR2Q9HCU4 2923 aa7.58□□□□□ -1.2
ALK-201ENST00000389048 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
ALK-201ENST00000389048 KRTAP12-1P59990 96 aa7.55□□□□□ -1.2
ALK-201ENST00000389048 TNRC18O15417 2968 aaPredicted RBP7.54□□□□□ -1.2
ALK-201ENST00000389048 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
ALK-201ENST00000389048 CRCT1Q9UGL9 99 aa7.47□□□□□ -1.21
ALK-201ENST00000389048 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.21
ALK-201ENST00000389048 DCHS2Q6V1P9 2916 aa7.45□□□□□ -1.22
ALK-201ENST00000389048 DMXL1Q9Y485 3027 aa7.44□□□□□ -1.22
ALK-201ENST00000389048 ZFHX4Q86UP3 3567 aa7.44□□□□□ -1.22
ALK-201ENST00000389048 TGP01266 2768 aa7.42□□□□□ -1.22
ALK-201ENST00000389048 KRTAP3-1Q9BYR8 98 aa7.38□□□□□ -1.23
ALK-201ENST00000389048 TENM2Q9NT68 2774 aa7.35□□□□□ -1.23
ALK-201ENST00000389048 CELSR1Q9NYQ6 3014 aa7.33□□□□□ -1.24
ALK-201ENST00000389048 NBPF19A0A087WUL8 3843 aa7.33□□□□□ -1.24
ALK-201ENST00000389048 LAMA5O15230 3695 aa7.32□□□□□ -1.24
ALK-201ENST00000389048 RELNP78509 3460 aa7.31□□□□□ -1.24
ALK-201ENST00000389048 TENM1Q9UKZ4 2725 aa7.29□□□□□ -1.24
ALK-201ENST00000389048 FBN2P35556 2912 aa7.25□□□□□ -1.25
ALK-201ENST00000389048 NIPBLQ6KC79 2804 aaeCLIP7.25□□□□□ -1.25
ALK-201ENST00000389048 NF1P21359 2839 aa7.25□□□□□ -1.25
ALK-201ENST00000389048 ZANQ9Y493 2812 aa7.21□□□□□ -1.25
ALK-201ENST00000389048 HRNRQ86YZ3 2850 aaPredicted RBP7.21□□□□□ -1.26
ALK-201ENST00000389048 KRTAP10-6P60371 365 aaPredicted RBP7.15□□□□□ -1.27
ALK-201ENST00000389048 DMDP11532 3685 aa7.15□□□□□ -1.27
ALK-201ENST00000389048 TENM3Q9P273 2699 aa7.14□□□□□ -1.27
ALK-201ENST00000389048 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
ALK-201ENST00000389048 CUBNO60494 3623 aa7.11□□□□□ -1.27
ALK-201ENST00000389048 SMG1Q96Q15 3661 aaKnown RBP7.07□□□□□ -1.28
ALK-201ENST00000389048 INE1O15225 51 aa7.06□□□□□ -1.28
ALK-201ENST00000389048 SVEP1Q4LDE5 3571 aa7.05□□□□□ -1.28
ALK-201ENST00000389048 VWFP04275 2813 aa7.03□□□□□ -1.28
ALK-201ENST00000389048 KRTAP10-12P60413 245 aa7□□□□□ -1.29
ALK-201ENST00000389048 PDZD2O15018 2839 aa6.97□□□□□ -1.29
ALK-201ENST00000389048 MXRA5Q9NR99 2828 aa6.97□□□□□ -1.29
ALK-201ENST00000389048 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
ALK-201ENST00000389048 ZFHX3Q15911 3703 aa6.92□□□□□ -1.3
ALK-201ENST00000389048 KRTAP3-3Q9BYR6 98 aa6.85□□□□□ -1.31
ALK-201ENST00000389048 KRTAP3-2Q9BYR7 98 aa6.84□□□□□ -1.31
ALK-201ENST00000389048 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
ALK-201ENST00000389048 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
ALK-201ENST00000389048 CSMD2Q7Z408 3487 aa6.76□□□□□ -1.33
ALK-201ENST00000389048 ANK3Q12955 4377 aaKnown RBP6.76□□□□□ -1.33
ALK-201ENST00000389048 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
ALK-201ENST00000389048 KRTAP4-5Q9BYR2 181 aa6.74□□□□□ -1.33
ALK-201ENST00000389048 MUC3AQ02505 3323 aa6.73□□□□□ -1.33
ALK-201ENST00000389048 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
ALK-201ENST00000389048 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
ALK-201ENST00000389048 FBN1P35555 2871 aaKnown RBP6.64□□□□□ -1.35
ALK-201ENST00000389048 MEGF8Q7Z7M0 2845 aa6.64□□□□□ -1.35
ALK-201ENST00000389048 SRRM2Q9UQ35 2752 aaKnown RBP6.62□□□□□ -1.35
ALK-201ENST00000389048 OTOGQ6ZRI0 2925 aa6.6□□□□□ -1.35
ALK-201ENST00000389048 HUWE1Q7Z6Z7 4374 aaKnown RBP6.6□□□□□ -1.35
ALK-201ENST00000389048 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
ALK-201ENST00000389048 TRRAPQ9Y4A5 3859 aa6.59□□□□□ -1.36
ALK-201ENST00000389048 CSMD3Q7Z407 3707 aa6.58□□□□□ -1.36
ALK-201ENST00000389048 VPS13CQ709C8 3753 aa6.52□□□□□ -1.37
ALK-201ENST00000389048 KRTAP8-1Q8IUC2 63 aa6.47□□□□□ -1.37
ALK-201ENST00000389048 COL7A1Q02388 2944 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms