RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 A8MUU9 505 aa8.96□□□□□ -0.97
COL2A1-202ENST00000380518 TENM4Q6N022 2769 aa8.96□□□□□ -0.97
COL2A1-202ENST00000380518 KRTAP25-1Q3LHN0 102 aa8.95□□□□□ -0.98
COL2A1-202ENST00000380518 LAMA1P25391 3075 aa8.95□□□□□ -0.98
COL2A1-202ENST00000380518 VCANP13611 3396 aa8.94□□□□□ -0.98
COL2A1-202ENST00000380518 NBEAQ8NFP9 2946 aa8.93□□□□□ -0.98
COL2A1-202ENST00000380518 DNAH14Q0VDD8 3507 aa8.93□□□□□ -0.98
COL2A1-202ENST00000380518 FRYLO94915 3013 aa8.89□□□□□ -0.99
COL2A1-202ENST00000380518 ADGRG4Q8IZF6 3080 aa8.87□□□□□ -0.99
COL2A1-202ENST00000380518 CELSR2Q9HCU4 2923 aa8.86□□□□□ -0.99
COL2A1-202ENST00000380518 LRBAP50851 2863 aa8.83□□□□□ -1
COL2A1-202ENST00000380518 C20orf166-AS1Q96NR2 134 aa8.81□□□□□ -1
COL2A1-202ENST00000380518 ZZEF1O43149 2961 aa8.77□□□□□ -1.01
COL2A1-202ENST00000380518 BOD1L1Q8NFC6 3051 aa8.77□□□□□ -1.01
COL2A1-202ENST00000380518 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
COL2A1-202ENST00000380518 DCHS2Q6V1P9 2916 aa8.73□□□□□ -1.01
COL2A1-202ENST00000380518 KRTAP21-3Q3LHN1 58 aa8.71□□□□□ -1.02
COL2A1-202ENST00000380518 COL6A3P12111 3177 aa8.7□□□□□ -1.02
COL2A1-202ENST00000380518 CRYBG3Q68DQ2 2970 aa8.7□□□□□ -1.02
COL2A1-202ENST00000380518 TENM3Q9P273 2699 aa8.67□□□□□ -1.02
COL2A1-202ENST00000380518 ZANQ9Y493 2812 aa8.67□□□□□ -1.02
COL2A1-202ENST00000380518 TNP1P09430 55 aa8.67□□□□□ -1.02
COL2A1-202ENST00000380518 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.02
COL2A1-202ENST00000380518 NDUFAF8A1L188 74 aa8.64□□□□□ -1.03
COL2A1-202ENST00000380518 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
COL2A1-202ENST00000380518 SPEGQ15772 3267 aa8.62□□□□□ -1.03
COL2A1-202ENST00000380518 EYSQ5T1H1 3165 aa8.61□□□□□ -1.03
COL2A1-202ENST00000380518 XP32Q5T750 250 aa8.55□□□□□ -1.04
COL2A1-202ENST00000380518 TNRC18O15417 2968 aaPredicted RBP8.55□□□□□ -1.04
COL2A1-202ENST00000380518 CFAP47Q6ZTR5 3102 aa8.52□□□□□ -1.05
COL2A1-202ENST00000380518 TENM1Q9UKZ4 2725 aa8.49□□□□□ -1.05
COL2A1-202ENST00000380518 NF1P21359 2839 aa8.49□□□□□ -1.05
COL2A1-202ENST00000380518 PP632Q6XCG6 107 aa8.48□□□□□ -1.05
COL2A1-202ENST00000380518 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
COL2A1-202ENST00000380518 H0YAA0 97 aa8.43□□□□□ -1.06
COL2A1-202ENST00000380518 FBN2P35556 2912 aa8.42□□□□□ -1.06
COL2A1-202ENST00000380518 DMXL1Q9Y485 3027 aa8.4□□□□□ -1.06
COL2A1-202ENST00000380518 TPRXLQ17RH7 258 aa8.39□□□□□ -1.07
COL2A1-202ENST00000380518 HRNRQ86YZ3 2850 aaPredicted RBP8.38□□□□□ -1.07
COL2A1-202ENST00000380518 KRTAP10-8P60410 259 aa8.37□□□□□ -1.07
COL2A1-202ENST00000380518 USP34Q70CQ2 3546 aa8.37□□□□□ -1.07
COL2A1-202ENST00000380518 MYO15AQ9UKN7 3530 aa8.37□□□□□ -1.07
COL2A1-202ENST00000380518 LOC400499M0QZD8 3231 aa8.33□□□□□ -1.08
COL2A1-202ENST00000380518 A0A1B0GVY2 172 aa8.31□□□□□ -1.08
COL2A1-202ENST00000380518 TENM2Q9NT68 2774 aa8.29□□□□□ -1.08
COL2A1-202ENST00000380518 P0C880 135 aa8.29□□□□□ -1.08
COL2A1-202ENST00000380518 TGP01266 2768 aa8.28□□□□□ -1.08
COL2A1-202ENST00000380518 KRTAP13-3Q3SY46 172 aa8.27□□□□□ -1.09
COL2A1-202ENST00000380518 MXRA5Q9NR99 2828 aa8.2□□□□□ -1.1
COL2A1-202ENST00000380518 CELSR1Q9NYQ6 3014 aa8.19□□□□□ -1.1
COL2A1-202ENST00000380518 PKD1L1Q8TDX9 2849 aa8.19□□□□□ -1.1
COL2A1-202ENST00000380518 KRTAP10-10P60014 251 aa8.17□□□□□ -1.1
COL2A1-202ENST00000380518 PDZD2O15018 2839 aa8.1□□□□□ -1.11
COL2A1-202ENST00000380518 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
COL2A1-202ENST00000380518 VWFP04275 2813 aa8.04□□□□□ -1.12
COL2A1-202ENST00000380518 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
COL2A1-202ENST00000380518 RELNP78509 3460 aa7.97□□□□□ -1.13
COL2A1-202ENST00000380518 LAMA5O15230 3695 aa7.89□□□□□ -1.15
COL2A1-202ENST00000380518 KRTAP12-2P59991 146 aa7.89□□□□□ -1.15
COL2A1-202ENST00000380518 MUC3AQ02505 3323 aa7.88□□□□□ -1.15
COL2A1-202ENST00000380518 ASPMQ8IZT6 3477 aa7.88□□□□□ -1.15
COL2A1-202ENST00000380518 DCHS1Q96JQ0 3298 aa7.87□□□□□ -1.15
COL2A1-202ENST00000380518 DMDP11532 3685 aa7.86□□□□□ -1.15
COL2A1-202ENST00000380518 ZFHX4Q86UP3 3567 aa7.85□□□□□ -1.15
COL2A1-202ENST00000380518 SRRM2Q9UQ35 2752 aaKnown RBP7.83□□□□□ -1.16
COL2A1-202ENST00000380518 KRTAP13-4Q3LI77 160 aa7.8□□□□□ -1.16
COL2A1-202ENST00000380518 KRTAP12-1P59990 96 aa7.8□□□□□ -1.16
COL2A1-202ENST00000380518 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
COL2A1-202ENST00000380518 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
COL2A1-202ENST00000380518 FBN3Q75N90 2809 aa7.62□□□□□ -1.19
COL2A1-202ENST00000380518 SMG1Q96Q15 3661 aaKnown RBP7.6□□□□□ -1.19
COL2A1-202ENST00000380518 KRTAP10-6P60371 365 aaPredicted RBP7.58□□□□□ -1.2
COL2A1-202ENST00000380518 OTOGQ6ZRI0 2925 aa7.57□□□□□ -1.2
COL2A1-202ENST00000380518 CSMD1Q96PZ7 3565 aa7.56□□□□□ -1.2
COL2A1-202ENST00000380518 MEGF8Q7Z7M0 2845 aa7.52□□□□□ -1.2
COL2A1-202ENST00000380518 COL7A1Q02388 2944 aa7.46□□□□□ -1.22
COL2A1-202ENST00000380518 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
COL2A1-202ENST00000380518 NBPF19A0A087WUL8 3843 aa7.43□□□□□ -1.22
COL2A1-202ENST00000380518 SVEP1Q4LDE5 3571 aa7.42□□□□□ -1.22
COL2A1-202ENST00000380518 MT1HL1P0DM35 61 aa7.36□□□□□ -1.23
COL2A1-202ENST00000380518 SPENQ96T58 3664 aaKnown RBP7.33□□□□□ -1.24
COL2A1-202ENST00000380518 ZFHX3Q15911 3703 aa7.33□□□□□ -1.24
COL2A1-202ENST00000380518 CUBNO60494 3623 aa7.31□□□□□ -1.24
COL2A1-202ENST00000380518 KRTAP3-2Q9BYR7 98 aa7.3□□□□□ -1.24
COL2A1-202ENST00000380518 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
COL2A1-202ENST00000380518 CSMD2Q7Z408 3487 aa7.26□□□□□ -1.25
COL2A1-202ENST00000380518 BSNQ9UPA5 3926 aa7.23□□□□□ -1.25
COL2A1-202ENST00000380518 ANK3Q12955 4377 aaKnown RBP7.19□□□□□ -1.26
COL2A1-202ENST00000380518 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
COL2A1-202ENST00000380518 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
COL2A1-202ENST00000380518 TRRAPQ9Y4A5 3859 aa7.07□□□□□ -1.28
COL2A1-202ENST00000380518 INE1O15225 51 aa7.07□□□□□ -1.28
COL2A1-202ENST00000380518 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
COL2A1-202ENST00000380518 KRTAP12-3P60328 96 aa6.96□□□□□ -1.3
COL2A1-202ENST00000380518 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
COL2A1-202ENST00000380518 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
COL2A1-202ENST00000380518 VPS13CQ709C8 3753 aa6.84□□□□□ -1.31
COL2A1-202ENST00000380518 LCE3AQ5TA76 89 aa6.84□□□□□ -1.32
COL2A1-202ENST00000380518 LORP23490 312 aaPredicted RBP6.81□□□□□ -1.32
COL2A1-202ENST00000380518 HUWE1Q7Z6Z7 4374 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms