RNA–Protein interactions for RNA: ENST00000377636.7

TBC1D4-202, Transcript of TBC1 domain family member 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TBC1D4, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-202ENST00000377636 CELSR3Q9NYQ7 3312 aa9.27□□□□□ -0.93
TBC1D4-202ENST00000377636 HIVEP1P15822 2718 aa9.26□□□□□ -0.93
TBC1D4-202ENST00000377636 ASH1LQ9NR48 2969 aaKnown RBP9.26□□□□□ -0.93
TBC1D4-202ENST00000377636 KRTAP10-8P60410 259 aa9.22□□□□□ -0.93
TBC1D4-202ENST00000377636 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
TBC1D4-202ENST00000377636 CRYBG3Q68DQ2 2970 aa9.19□□□□□ -0.94
TBC1D4-202ENST00000377636 XP32Q5T750 250 aa9.18□□□□□ -0.94
TBC1D4-202ENST00000377636 KRTAP21-3Q3LHN1 58 aa9.18□□□□□ -0.94
TBC1D4-202ENST00000377636 ATMQ13315 3056 aa9.17□□□□□ -0.94
TBC1D4-202ENST00000377636 TENM4Q6N022 2769 aa9.15□□□□□ -0.95
TBC1D4-202ENST00000377636 DNAH14Q0VDD8 3507 aa9.14□□□□□ -0.95
TBC1D4-202ENST00000377636 KRTAP1-4P0C5Y4 121 aa9.13□□□□□ -0.95
TBC1D4-202ENST00000377636 FLNCQ14315 2725 aa9.13□□□□□ -0.95
TBC1D4-202ENST00000377636 COL12A1Q99715 3063 aa9.13□□□□□ -0.95
TBC1D4-202ENST00000377636 PP632Q6XCG6 107 aa9.12□□□□□ -0.95
TBC1D4-202ENST00000377636 LRBAP50851 2863 aa9.08□□□□□ -0.96
TBC1D4-202ENST00000377636 LAMA1P25391 3075 aa9.07□□□□□ -0.96
TBC1D4-202ENST00000377636 VCANP13611 3396 aa9.06□□□□□ -0.96
TBC1D4-202ENST00000377636 COL6A3P12111 3177 aa9.06□□□□□ -0.96
TBC1D4-202ENST00000377636 FRYLO94915 3013 aa9.04□□□□□ -0.96
TBC1D4-202ENST00000377636 CELSR2Q9HCU4 2923 aa9.03□□□□□ -0.96
TBC1D4-202ENST00000377636 SPTBN5Q9NRC6 3674 aaKnown RBP9.02□□□□□ -0.96
TBC1D4-202ENST00000377636 H0YAA0 97 aa9.02□□□□□ -0.96
TBC1D4-202ENST00000377636 TNRC18O15417 2968 aaPredicted RBP9.02□□□□□ -0.97
TBC1D4-202ENST00000377636 NIPBLQ6KC79 2804 aaeCLIP9.01□□□□□ -0.97
TBC1D4-202ENST00000377636 ADGRG4Q8IZF6 3080 aa8.99□□□□□ -0.97
TBC1D4-202ENST00000377636 NBEAQ8NFP9 2946 aa8.97□□□□□ -0.97
TBC1D4-202ENST00000377636 KRTAP10-10P60014 251 aa8.97□□□□□ -0.97
TBC1D4-202ENST00000377636 TPRXLQ17RH7 258 aa8.96□□□□□ -0.98
TBC1D4-202ENST00000377636 BOD1L1Q8NFC6 3051 aa8.95□□□□□ -0.98
TBC1D4-202ENST00000377636 CFAP47Q6ZTR5 3102 aa8.94□□□□□ -0.98
TBC1D4-202ENST00000377636 P0C880 135 aa8.94□□□□□ -0.98
TBC1D4-202ENST00000377636 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
TBC1D4-202ENST00000377636 ZZEF1O43149 2961 aa8.87□□□□□ -0.99
TBC1D4-202ENST00000377636 PRO2289Q9P1D8 64 aa8.84□□□□□ -0.99
TBC1D4-202ENST00000377636 EYSQ5T1H1 3165 aa8.84□□□□□ -0.99
TBC1D4-202ENST00000377636 USP34Q70CQ2 3546 aa8.81□□□□□ -1
TBC1D4-202ENST00000377636 KRTAP13-3Q3SY46 172 aa8.81□□□□□ -1
TBC1D4-202ENST00000377636 TENM3Q9P273 2699 aa8.8□□□□□ -1
TBC1D4-202ENST00000377636 TENM1Q9UKZ4 2725 aa8.78□□□□□ -1
TBC1D4-202ENST00000377636 ZANQ9Y493 2812 aa8.69□□□□□ -1.02
TBC1D4-202ENST00000377636 NF1P21359 2839 aa8.69□□□□□ -1.02
TBC1D4-202ENST00000377636 DMXL1Q9Y485 3027 aa8.67□□□□□ -1.02
TBC1D4-202ENST00000377636 SPEGQ15772 3267 aa8.64□□□□□ -1.03
TBC1D4-202ENST00000377636 TENM2Q9NT68 2774 aa8.62□□□□□ -1.03
TBC1D4-202ENST00000377636 TGP01266 2768 aa8.6□□□□□ -1.03
TBC1D4-202ENST00000377636 FBN2P35556 2912 aa8.54□□□□□ -1.04
TBC1D4-202ENST00000377636 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
TBC1D4-202ENST00000377636 HRNRQ86YZ3 2850 aaPredicted RBP8.47□□□□□ -1.05
TBC1D4-202ENST00000377636 CELSR1Q9NYQ6 3014 aa8.47□□□□□ -1.05
TBC1D4-202ENST00000377636 PKD1L1Q8TDX9 2849 aa8.42□□□□□ -1.06
TBC1D4-202ENST00000377636 LOC400499M0QZD8 3231 aa8.41□□□□□ -1.06
TBC1D4-202ENST00000377636 MYO15AQ9UKN7 3530 aa8.4□□□□□ -1.06
TBC1D4-202ENST00000377636 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
TBC1D4-202ENST00000377636 PDZD2O15018 2839 aa8.37□□□□□ -1.07
TBC1D4-202ENST00000377636 KRTAP12-1P59990 96 aa8.32□□□□□ -1.08
TBC1D4-202ENST00000377636 VWFP04275 2813 aa8.32□□□□□ -1.08
TBC1D4-202ENST00000377636 ASPMQ8IZT6 3477 aa8.24□□□□□ -1.09
TBC1D4-202ENST00000377636 MXRA5Q9NR99 2828 aa8.23□□□□□ -1.09
TBC1D4-202ENST00000377636 RELNP78509 3460 aa8.2□□□□□ -1.1
TBC1D4-202ENST00000377636 KRTAP3-1Q9BYR8 98 aa8.2□□□□□ -1.1
TBC1D4-202ENST00000377636 NBPF19A0A087WUL8 3843 aa8.17□□□□□ -1.1
TBC1D4-202ENST00000377636 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
TBC1D4-202ENST00000377636 WDFY3Q8IZQ1 3526 aa8.14□□□□□ -1.11
TBC1D4-202ENST00000377636 LAMA5O15230 3695 aa8.05□□□□□ -1.12
TBC1D4-202ENST00000377636 DCHS1Q96JQ0 3298 aa8.01□□□□□ -1.13
TBC1D4-202ENST00000377636 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
TBC1D4-202ENST00000377636 ZFHX4Q86UP3 3567 aa7.98□□□□□ -1.13
TBC1D4-202ENST00000377636 SRRM2Q9UQ35 2752 aaKnown RBP7.98□□□□□ -1.13
TBC1D4-202ENST00000377636 DMDP11532 3685 aa7.96□□□□□ -1.14
TBC1D4-202ENST00000377636 ANK3Q12955 4377 aaKnown RBP7.9□□□□□ -1.14
TBC1D4-202ENST00000377636 CRCT1Q9UGL9 99 aa7.85□□□□□ -1.15
TBC1D4-202ENST00000377636 FBN1P35555 2871 aaKnown RBP7.83□□□□□ -1.16
TBC1D4-202ENST00000377636 FBN3Q75N90 2809 aa7.8□□□□□ -1.16
TBC1D4-202ENST00000377636 MEGF8Q7Z7M0 2845 aa7.76□□□□□ -1.17
TBC1D4-202ENST00000377636 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
TBC1D4-202ENST00000377636 OTOGQ6ZRI0 2925 aa7.75□□□□□ -1.17
TBC1D4-202ENST00000377636 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
TBC1D4-202ENST00000377636 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
TBC1D4-202ENST00000377636 KRTAP10-12P60413 245 aa7.73□□□□□ -1.17
TBC1D4-202ENST00000377636 MUC3AQ02505 3323 aa7.7□□□□□ -1.18
TBC1D4-202ENST00000377636 SMG1Q96Q15 3661 aaKnown RBP7.69□□□□□ -1.18
TBC1D4-202ENST00000377636 COL7A1Q02388 2944 aa7.68□□□□□ -1.18
TBC1D4-202ENST00000377636 KRTAP3-2Q9BYR7 98 aa7.65□□□□□ -1.18
TBC1D4-202ENST00000377636 KRTAP3-3Q9BYR6 98 aa7.64□□□□□ -1.19
TBC1D4-202ENST00000377636 INE1O15225 51 aa7.63□□□□□ -1.19
TBC1D4-202ENST00000377636 CSMD2Q7Z408 3487 aa7.57□□□□□ -1.2
TBC1D4-202ENST00000377636 SPENQ96T58 3664 aaKnown RBP7.54□□□□□ -1.2
TBC1D4-202ENST00000377636 SVEP1Q4LDE5 3571 aa7.51□□□□□ -1.21
TBC1D4-202ENST00000377636 KRTAP12-3P60328 96 aa7.51□□□□□ -1.21
TBC1D4-202ENST00000377636 KRTAP4-5Q9BYR2 181 aa7.5□□□□□ -1.21
TBC1D4-202ENST00000377636 BSNQ9UPA5 3926 aa7.5□□□□□ -1.21
TBC1D4-202ENST00000377636 HUWE1Q7Z6Z7 4374 aaKnown RBP7.45□□□□□ -1.22
TBC1D4-202ENST00000377636 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
TBC1D4-202ENST00000377636 LCE3AQ5TA76 89 aa7.41□□□□□ -1.22
TBC1D4-202ENST00000377636 KRTAP10-4P60372 401 aaPredicted RBP7.41□□□□□ -1.22
TBC1D4-202ENST00000377636 ALMS1Q8TCU4 4167 aa7.33□□□□□ -1.24
TBC1D4-202ENST00000377636 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
TBC1D4-202ENST00000377636 CUBNO60494 3623 aa7.28□□□□□ -1.24
TBC1D4-202ENST00000377636 LORP23490 312 aaPredicted RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms