RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 KRTAP13-4Q3LI77 160 aa3.1□□□□□ -1.91
SCN2A-202ENST00000375427 KRTAP15-1Q3LI76 137 aa3.09□□□□□ -1.91
SCN2A-202ENST00000375427 PRUNE2Q8WUY3 3088 aa3.08□□□□□ -1.92
SCN2A-202ENST00000375427 TACC2O95359 2948 aa3.06□□□□□ -1.92
SCN2A-202ENST00000375427 KRTAP10-1P60331 282 aa3.06□□□□□ -1.92
SCN2A-202ENST00000375427 DMXL2Q8TDJ6 3036 aa3.06□□□□□ -1.92
SCN2A-202ENST00000375427 KRTAP10-10P60014 251 aa3.06□□□□□ -1.92
SCN2A-202ENST00000375427 FREM2Q5SZK8 3169 aa3.05□□□□□ -1.92
SCN2A-202ENST00000375427 ADGRG4Q8IZF6 3080 aa3.04□□□□□ -1.92
SCN2A-202ENST00000375427 DCHS2Q6V1P9 2916 aa3.04□□□□□ -1.92
SCN2A-202ENST00000375427 REV3LO60673 3130 aa3.03□□□□□ -1.92
SCN2A-202ENST00000375427 NBEAQ8NFP9 2946 aa3.03□□□□□ -1.92
SCN2A-202ENST00000375427 FRYQ5TBA9 3013 aa3.03□□□□□ -1.93
SCN2A-202ENST00000375427 TENM4Q6N022 2769 aa3□□□□□ -1.93
SCN2A-202ENST00000375427 KRTAP10-3P60369 221 aa3□□□□□ -1.93
SCN2A-202ENST00000375427 KRTAP10-2P60368 255 aa3□□□□□ -1.93
SCN2A-202ENST00000375427 ZANQ9Y493 2812 aa2.99□□□□□ -1.93
SCN2A-202ENST00000375427 LAMA1P25391 3075 aa2.99□□□□□ -1.93
SCN2A-202ENST00000375427 HRNRQ86YZ3 2850 aaPredicted RBP2.99□□□□□ -1.93
SCN2A-202ENST00000375427 TPRXLQ17RH7 258 aa2.98□□□□□ -1.93
SCN2A-202ENST00000375427 ATMQ13315 3056 aa2.98□□□□□ -1.93
SCN2A-202ENST00000375427 A0A1B0GVY2 172 aa2.97□□□□□ -1.93
SCN2A-202ENST00000375427 XP32Q5T750 250 aa2.97□□□□□ -1.93
SCN2A-202ENST00000375427 KRTAP1-5Q9BYS1 174 aa2.97□□□□□ -1.93
SCN2A-202ENST00000375427 KRTAP10-6P60371 365 aaPredicted RBP2.96□□□□□ -1.94
SCN2A-202ENST00000375427 CELSR1Q9NYQ6 3014 aa2.95□□□□□ -1.94
SCN2A-202ENST00000375427 MXRA5Q9NR99 2828 aa2.94□□□□□ -1.94
SCN2A-202ENST00000375427 DMXL1Q9Y485 3027 aa2.94□□□□□ -1.94
SCN2A-202ENST00000375427 GOLGB1Q14789 3259 aaKnown RBP2.93□□□□□ -1.94
SCN2A-202ENST00000375427 KRTAP10-7P60409 375 aaPredicted RBP2.92□□□□□ -1.94
SCN2A-202ENST00000375427 VWFP04275 2813 aa2.91□□□□□ -1.94
SCN2A-202ENST00000375427 COL7A1Q02388 2944 aa2.9□□□□□ -1.95
SCN2A-202ENST00000375427 RANBP2P49792 3224 aaKnown RBP2.89□□□□□ -1.95
SCN2A-202ENST00000375427 ZFHX3Q15911 3703 aa2.89□□□□□ -1.95
SCN2A-202ENST00000375427 MT3P25713 68 aa2.88□□□□□ -1.95
SCN2A-202ENST00000375427 KRTAP12-1P59990 96 aa2.88□□□□□ -1.95
SCN2A-202ENST00000375427 KRTAP13-1Q8IUC0 172 aa2.88□□□□□ -1.95
SCN2A-202ENST00000375427 KRTAP1-1Q07627 177 aa2.87□□□□□ -1.95
SCN2A-202ENST00000375427 PKD1L1Q8TDX9 2849 aa2.87□□□□□ -1.95
SCN2A-202ENST00000375427 KRTAP21-3Q3LHN1 58 aa2.87□□□□□ -1.95
SCN2A-202ENST00000375427 ZZEF1O43149 2961 aa2.87□□□□□ -1.95
SCN2A-202ENST00000375427 KRTAP1-3Q8IUG1 177 aa2.87□□□□□ -1.95
SCN2A-202ENST00000375427 VPS13AQ96RL7 3174 aa2.86□□□□□ -1.95
SCN2A-202ENST00000375427 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
SCN2A-202ENST00000375427 WDFY4Q6ZS81 3184 aa2.86□□□□□ -1.95
SCN2A-202ENST00000375427 HTTP42858 3142 aa2.85□□□□□ -1.95
SCN2A-202ENST00000375427 CRCT1Q9UGL9 99 aa2.82□□□□□ -1.96
SCN2A-202ENST00000375427 SZT2Q5T011 3432 aa2.82□□□□□ -1.96
SCN2A-202ENST00000375427 BOD1L1Q8NFC6 3051 aa2.81□□□□□ -1.96
SCN2A-202ENST00000375427 UNC80Q8N2C7 3258 aa2.79□□□□□ -1.96
SCN2A-202ENST00000375427 KRTAP10-5P60370 271 aa2.78□□□□□ -1.97
SCN2A-202ENST00000375427 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
SCN2A-202ENST00000375427 VCANP13611 3396 aa2.74□□□□□ -1.97
SCN2A-202ENST00000375427 XIRP2A4UGR9 3374 aa2.73□□□□□ -1.97
SCN2A-202ENST00000375427 ZFHX4Q86UP3 3567 aa2.72□□□□□ -1.97
SCN2A-202ENST00000375427 UTRNP46939 3433 aa2.72□□□□□ -1.97
SCN2A-202ENST00000375427 KRTAP7-1Q8IUC3 87 aa2.72□□□□□ -1.97
SCN2A-202ENST00000375427 KRTAP13-3Q3SY46 172 aa2.7□□□□□ -1.98
SCN2A-202ENST00000375427 FBN3Q75N90 2809 aa2.68□□□□□ -1.98
SCN2A-202ENST00000375427 KRTAP12-3P60328 96 aa2.68□□□□□ -1.98
SCN2A-202ENST00000375427 FBN1P35555 2871 aaKnown RBP2.66□□□□□ -1.98
SCN2A-202ENST00000375427 DNAH14Q0VDD8 3507 aa2.66□□□□□ -1.98
SCN2A-202ENST00000375427 USP34Q70CQ2 3546 aa2.66□□□□□ -1.98
SCN2A-202ENST00000375427 MKI67P46013 3256 aaKnown RBP2.64□□□□□ -1.99
SCN2A-202ENST00000375427 KRTAP1-4P0C5Y4 121 aa2.64□□□□□ -1.99
SCN2A-202ENST00000375427 FBN2P35556 2912 aa2.62□□□□□ -1.99
SCN2A-202ENST00000375427 SPTBN5Q9NRC6 3674 aaKnown RBP2.61□□□□□ -1.99
SCN2A-202ENST00000375427 KRTAP10-4P60372 401 aaPredicted RBP2.61□□□□□ -1.99
SCN2A-202ENST00000375427 COL6A3P12111 3177 aa2.59□□□□□ -1.99
SCN2A-202ENST00000375427 KRTAP3-1Q9BYR8 98 aa2.58□□□□□ -2
SCN2A-202ENST00000375427 CFAP47Q6ZTR5 3102 aa2.58□□□□□ -2
SCN2A-202ENST00000375427 SPEGQ15772 3267 aa2.57□□□□□ -2
SCN2A-202ENST00000375427 CELSR3Q9NYQ7 3312 aa2.56□□□□□ -2
SCN2A-202ENST00000375427 NBPF19A0A087WUL8 3843 aa2.52□□□□□ -2.01
SCN2A-202ENST00000375427 LOC400499M0QZD8 3231 aa2.49□□□□□ -2.01
SCN2A-202ENST00000375427 LCE3AQ5TA76 89 aa2.48□□□□□ -2.01
SCN2A-202ENST00000375427 KRTAP3-3Q9BYR6 98 aa2.45□□□□□ -2.02
SCN2A-202ENST00000375427 KRTAP3-2Q9BYR7 98 aa2.45□□□□□ -2.02
SCN2A-202ENST00000375427 ALMS1Q8TCU4 4167 aa2.42□□□□□ -2.02
SCN2A-202ENST00000375427 KRTAP8-1Q8IUC2 63 aa2.42□□□□□ -2.02
SCN2A-202ENST00000375427 BRCA2P51587 3418 aa2.4□□□□□ -2.03
SCN2A-202ENST00000375427 AKAP9Q99996 3911 aa2.39□□□□□ -2.03
SCN2A-202ENST00000375427 DMDP11532 3685 aa2.39□□□□□ -2.03
SCN2A-202ENST00000375427 DCHS1Q96JQ0 3298 aa2.38□□□□□ -2.03
SCN2A-202ENST00000375427 CMYA5Q8N3K9 4069 aa2.37□□□□□ -2.03
SCN2A-202ENST00000375427 ASPMQ8IZT6 3477 aa2.37□□□□□ -2.03
SCN2A-202ENST00000375427 EYSQ5T1H1 3165 aa2.37□□□□□ -2.03
SCN2A-202ENST00000375427 SPENQ96T58 3664 aaKnown RBP2.35□□□□□ -2.03
SCN2A-202ENST00000375427 LAMA3Q16787 3333 aa2.34□□□□□ -2.03
SCN2A-202ENST00000375427 WDFY3Q8IZQ1 3526 aa2.34□□□□□ -2.04
SCN2A-202ENST00000375427 LCE3CQ5T5A8 94 aa2.33□□□□□ -2.04
SCN2A-202ENST00000375427 RYR1P21817 5038 aa2.31□□□□□ -2.04
SCN2A-202ENST00000375427 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
SCN2A-202ENST00000375427 CDH23Q9H251 3354 aa2.29□□□□□ -2.04
SCN2A-202ENST00000375427 MYO15AQ9UKN7 3530 aa2.27□□□□□ -2.05
SCN2A-202ENST00000375427 SMG1Q96Q15 3661 aaKnown RBP2.27□□□□□ -2.05
SCN2A-202ENST00000375427 DNAH3Q8TD57 4116 aa2.25□□□□□ -2.05
SCN2A-202ENST00000375427 RELNP78509 3460 aa2.23□□□□□ -2.05
SCN2A-202ENST00000375427 VPS13CQ709C8 3753 aa2.23□□□□□ -2.05
SCN2A-202ENST00000375427 BSNQ9UPA5 3926 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms