RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 MT1HL1P0DM35 61 aa8.88□□□□□ -0.99
NIPAL3-204ENST00000374399 PCP4P48539 62 aa8.88□□□□□ -0.99
NIPAL3-204ENST00000374399 A0A1B0GVX0 72 aa8.88□□□□□ -0.99
NIPAL3-204ENST00000374399 KRTAP29-1A8MX34 341 aaPredicted RBP8.87□□□□□ -0.99
NIPAL3-204ENST00000374399 NOTCH2NLQ7Z3S9 236 aa8.87□□□□□ -0.99
NIPAL3-204ENST00000374399 MMP24-AS1A0A0U1RRL7 71 aa8.86□□□□□ -0.99
NIPAL3-204ENST00000374399 HCG22E2RYF7 251 aa8.86□□□□□ -0.99
NIPAL3-204ENST00000374399 ATOX1O00244 68 aa8.85□□□□□ -0.99
NIPAL3-204ENST00000374399 NDUFB1O75438 58 aa8.85□□□□□ -0.99
NIPAL3-204ENST00000374399 IGHV6-1A0A0B4J1U7 121 aa8.84□□□□□ -0.99
NIPAL3-204ENST00000374399 ANAPC13Q9BS18 74 aa8.84□□□□□ -0.99
NIPAL3-204ENST00000374399 WFDC13Q8IUB5 93 aa8.83□□□□□ -1
NIPAL3-204ENST00000374399 C8orf17Q9NRJ1 99 aa8.83□□□□□ -1
NIPAL3-204ENST00000374399 CASC2Q6XLA1 102 aa8.8□□□□□ -1
NIPAL3-204ENST00000374399 DMBT1Q9UGM3 2413 aaPredicted RBP8.79□□□□□ -1
NIPAL3-204ENST00000374399 OCR1Q9BZK8 76 aa8.79□□□□□ -1
NIPAL3-204ENST00000374399 hDV103S1A0JD37 113 aa8.77□□□□□ -1.01
NIPAL3-204ENST00000374399 OXTP01178 125 aa8.77□□□□□ -1.01
NIPAL3-204ENST00000374399 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
NIPAL3-204ENST00000374399 SERP2Q8N6R1 65 aa8.76□□□□□ -1.01
NIPAL3-204ENST00000374399 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
NIPAL3-204ENST00000374399 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
NIPAL3-204ENST00000374399 C8orf87E5RJ46 101 aa8.73□□□□□ -1.01
NIPAL3-204ENST00000374399 COX7CP15954 63 aa8.73□□□□□ -1.01
NIPAL3-204ENST00000374399 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
NIPAL3-204ENST00000374399 LINC00313P59037 77 aa8.71□□□□□ -1.01
NIPAL3-204ENST00000374399 SMIM20Q8N5G0 67 aa8.71□□□□□ -1.01
NIPAL3-204ENST00000374399 TMEM254Q8TBM7 123 aa8.71□□□□□ -1.01
NIPAL3-204ENST00000374399 MRPL34Q9BQ48 92 aaKnown RBP8.71□□□□□ -1.02
NIPAL3-204ENST00000374399 UQCRQO14949 82 aa8.67□□□□□ -1.02
NIPAL3-204ENST00000374399 Q8N9P0 234 aaPredicted RBP8.64□□□□□ -1.03
NIPAL3-204ENST00000374399 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
NIPAL3-204ENST00000374399 PCLOQ9Y6V0 5065 aa8.63□□□□□ -1.03
NIPAL3-204ENST00000374399 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
NIPAL3-204ENST00000374399 FP248Q71RG6 208 aaPredicted RBP8.6□□□□□ -1.03
NIPAL3-204ENST00000374399 C20orf197Q8N268 126 aa8.6□□□□□ -1.03
NIPAL3-204ENST00000374399 NDUFS5O43920 106 aa8.59□□□□□ -1.03
NIPAL3-204ENST00000374399 TP53AIP1Q9HCN2 124 aa8.59□□□□□ -1.03
NIPAL3-204ENST00000374399 KRTAP13-3Q3SY46 172 aa8.57□□□□□ -1.04
NIPAL3-204ENST00000374399 C5orf47Q569G3 176 aa8.57□□□□□ -1.04
NIPAL3-204ENST00000374399 Q5W150 140 aa8.57□□□□□ -1.04
NIPAL3-204ENST00000374399 A0A0U1RQV1 116 aa8.57□□□□□ -1.04
NIPAL3-204ENST00000374399 SNURFQ9Y675 71 aa8.56□□□□□ -1.04
NIPAL3-204ENST00000374399 KLKP1Q107X0 134 aa8.55□□□□□ -1.04
NIPAL3-204ENST00000374399 IGLV7-46A0A075B6I9 117 aa8.54□□□□□ -1.04
NIPAL3-204ENST00000374399 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
NIPAL3-204ENST00000374399 TRAV22A0A0B4J277 110 aa8.53□□□□□ -1.04
NIPAL3-204ENST00000374399 H0Y9P7 68 aa8.53□□□□□ -1.04
NIPAL3-204ENST00000374399 A8MUU9 505 aa8.52□□□□□ -1.05
NIPAL3-204ENST00000374399 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
NIPAL3-204ENST00000374399 J3QL48 77 aa8.5□□□□□ -1.05
NIPAL3-204ENST00000374399 LPAP08519 4548 aa8.49□□□□□ -1.05
NIPAL3-204ENST00000374399 MP68P56378 58 aa8.48□□□□□ -1.05
NIPAL3-204ENST00000374399 PRR4Q16378 134 aa8.48□□□□□ -1.05
NIPAL3-204ENST00000374399 LINC00208Q96KT6 92 aa8.48□□□□□ -1.05
NIPAL3-204ENST00000374399 H7BZZ5 65 aa8.46□□□□□ -1.06
NIPAL3-204ENST00000374399 H3BPC8 53 aa8.45□□□□□ -1.06
NIPAL3-204ENST00000374399 C1orf64Q8NEQ6 169 aa8.45□□□□□ -1.06
NIPAL3-204ENST00000374399 XP32Q5T750 250 aa8.44□□□□□ -1.06
NIPAL3-204ENST00000374399 LRP2P98164 4655 aa8.44□□□□□ -1.06
NIPAL3-204ENST00000374399 HERC1Q15751 4861 aa8.43□□□□□ -1.06
NIPAL3-204ENST00000374399 Q75L30 129 aa8.43□□□□□ -1.06
NIPAL3-204ENST00000374399 TPRXLQ17RH7 258 aa8.41□□□□□ -1.06
NIPAL3-204ENST00000374399 NDUFC1O43677 76 aa8.37□□□□□ -1.07
NIPAL3-204ENST00000374399 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
NIPAL3-204ENST00000374399 LOC101927531A0A1B0GV80 90 aa8.36□□□□□ -1.07
NIPAL3-204ENST00000374399 IGKV2-30P06310 120 aa8.36□□□□□ -1.07
NIPAL3-204ENST00000374399 CYP4F30PQ9H0H9 118 aa8.36□□□□□ -1.07
NIPAL3-204ENST00000374399 HMCN2Q8NDA2 5059 aa8.33□□□□□ -1.08
NIPAL3-204ENST00000374399 TMEM258P61165 79 aa8.32□□□□□ -1.08
NIPAL3-204ENST00000374399 PCOTHQ58A44 107 aa8.32□□□□□ -1.08
NIPAL3-204ENST00000374399 IGKV2D-30A0A075B6S6 120 aa8.29□□□□□ -1.08
NIPAL3-204ENST00000374399 ATP11AUNQ6ZP68 121 aa8.26□□□□□ -1.09
NIPAL3-204ENST00000374399 FAM236DA0A1B0GTK5 79 aa8.26□□□□□ -1.09
NIPAL3-204ENST00000374399 FAM236CP0DP71 79 aa8.26□□□□□ -1.09
NIPAL3-204ENST00000374399 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
NIPAL3-204ENST00000374399 SPANXA2-OT1Q8N9U9 137 aa8.23□□□□□ -1.09
NIPAL3-204ENST00000374399 HRES1P13985 223 aa8.22□□□□□ -1.09
NIPAL3-204ENST00000374399 SPINK7P58062 85 aa8.22□□□□□ -1.09
NIPAL3-204ENST00000374399 MUC17Q685J3 4493 aa8.21□□□□□ -1.1
NIPAL3-204ENST00000374399 ATP5EP56381 51 aaPredicted RBP8.17□□□□□ -1.1
NIPAL3-204ENST00000374399 C4orf26Q17RF5 130 aa8.11□□□□□ -1.11
NIPAL3-204ENST00000374399 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
NIPAL3-204ENST00000374399 KRTAP3-1Q9BYR8 98 aa8.08□□□□□ -1.12
NIPAL3-204ENST00000374399 SEC61BP60468 96 aaKnown RBP8.06□□□□□ -1.12
NIPAL3-204ENST00000374399 KRTAP4-1Q9BYQ7 146 aa8.06□□□□□ -1.12
NIPAL3-204ENST00000374399 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
NIPAL3-204ENST00000374399 RPS28P62857 69 aaKnown RBP8.05□□□□□ -1.12
NIPAL3-204ENST00000374399 MPLKIPQ8TAP9 179 aa8.01□□□□□ -1.13
NIPAL3-204ENST00000374399 COX6B2Q6YFQ2 88 aa8□□□□□ -1.13
NIPAL3-204ENST00000374399 COA5Q86WW8 74 aa8□□□□□ -1.13
NIPAL3-204ENST00000374399 ACYP2P14621 99 aa7.98□□□□□ -1.13
NIPAL3-204ENST00000374399 A8MUN3 132 aa7.96□□□□□ -1.14
NIPAL3-204ENST00000374399 MUC2Q02817 5179 aa7.95□□□□□ -1.14
NIPAL3-204ENST00000374399 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
NIPAL3-204ENST00000374399 RNF213Q63HN8 5207 aa7.88□□□□□ -1.15
NIPAL3-204ENST00000374399 KRTAP19-2Q3LHN2 52 aa7.87□□□□□ -1.15
NIPAL3-204ENST00000374399 SMIM26A0A096LP01 95 aa7.84□□□□□ -1.15
NIPAL3-204ENST00000374399 RBM12B-AS1Q9P1G2 102 aa7.83□□□□□ -1.16
NIPAL3-204ENST00000374399 CHKB-CPT1BH3BT56 60 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms