RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MAP1AP78559 2803 aaPredicted RBP7.84□□□□□ -1.15
RAPGEF1-202ENST00000372190 DMXL2Q8TDJ6 3036 aa7.84□□□□□ -1.15
RAPGEF1-202ENST00000372190 COL12A1Q99715 3063 aa7.83□□□□□ -1.16
RAPGEF1-202ENST00000372190 VCANP13611 3396 aa7.81□□□□□ -1.16
RAPGEF1-202ENST00000372190 DNAH14Q0VDD8 3507 aa7.8□□□□□ -1.16
RAPGEF1-202ENST00000372190 NBEAL2Q6ZNJ1 2754 aa7.8□□□□□ -1.16
RAPGEF1-202ENST00000372190 KRTAP13-2Q52LG2 175 aa7.79□□□□□ -1.16
RAPGEF1-202ENST00000372190 KRTAP7-1Q8IUC3 87 aa7.79□□□□□ -1.16
RAPGEF1-202ENST00000372190 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
RAPGEF1-202ENST00000372190 APCP25054 2843 aa7.76□□□□□ -1.17
RAPGEF1-202ENST00000372190 USP34Q70CQ2 3546 aa7.72□□□□□ -1.17
RAPGEF1-202ENST00000372190 KRTAP13-1Q8IUC0 172 aa7.72□□□□□ -1.17
RAPGEF1-202ENST00000372190 TACC2O95359 2948 aa7.72□□□□□ -1.17
RAPGEF1-202ENST00000372190 BOD1L1Q8NFC6 3051 aa7.72□□□□□ -1.17
RAPGEF1-202ENST00000372190 LRBAP50851 2863 aa7.71□□□□□ -1.17
RAPGEF1-202ENST00000372190 CRYBG3Q68DQ2 2970 aa7.71□□□□□ -1.18
RAPGEF1-202ENST00000372190 TENM4Q6N022 2769 aa7.7□□□□□ -1.18
RAPGEF1-202ENST00000372190 KRTAP10-8P60410 259 aa7.69□□□□□ -1.18
RAPGEF1-202ENST00000372190 DMXL1Q9Y485 3027 aa7.68□□□□□ -1.18
RAPGEF1-202ENST00000372190 REV3LO60673 3130 aa7.67□□□□□ -1.18
RAPGEF1-202ENST00000372190 STAB2Q8WWQ8 2551 aa7.66□□□□□ -1.18
RAPGEF1-202ENST00000372190 NBEAQ8NFP9 2946 aa7.65□□□□□ -1.18
RAPGEF1-202ENST00000372190 ADGRG4Q8IZF6 3080 aa7.61□□□□□ -1.19
RAPGEF1-202ENST00000372190 H0YAA0 97 aa7.61□□□□□ -1.19
RAPGEF1-202ENST00000372190 KALRNO60229 2985 aa7.6□□□□□ -1.19
RAPGEF1-202ENST00000372190 FREM2Q5SZK8 3169 aa7.57□□□□□ -1.2
RAPGEF1-202ENST00000372190 ZZEF1O43149 2961 aa7.53□□□□□ -1.2
RAPGEF1-202ENST00000372190 CFAP47Q6ZTR5 3102 aa7.48□□□□□ -1.21
RAPGEF1-202ENST00000372190 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
RAPGEF1-202ENST00000372190 SPEGQ15772 3267 aa7.45□□□□□ -1.22
RAPGEF1-202ENST00000372190 A0A1B0GVY2 172 aa7.43□□□□□ -1.22
RAPGEF1-202ENST00000372190 XP32Q5T750 250 aa7.43□□□□□ -1.22
RAPGEF1-202ENST00000372190 HRNRQ86YZ3 2850 aaPredicted RBP7.41□□□□□ -1.22
RAPGEF1-202ENST00000372190 NIPBLQ6KC79 2804 aaeCLIP7.41□□□□□ -1.22
RAPGEF1-202ENST00000372190 TPRXLQ17RH7 258 aa7.4□□□□□ -1.23
RAPGEF1-202ENST00000372190 CELSR2Q9HCU4 2923 aa7.34□□□□□ -1.23
RAPGEF1-202ENST00000372190 ZANQ9Y493 2812 aa7.33□□□□□ -1.24
RAPGEF1-202ENST00000372190 MYO15AQ9UKN7 3530 aa7.32□□□□□ -1.24
RAPGEF1-202ENST00000372190 INE1O15225 51 aa7.32□□□□□ -1.24
RAPGEF1-202ENST00000372190 DCHS2Q6V1P9 2916 aa7.31□□□□□ -1.24
RAPGEF1-202ENST00000372190 LOC400499M0QZD8 3231 aa7.3□□□□□ -1.24
RAPGEF1-202ENST00000372190 ASH1LQ9NR48 2969 aaKnown RBP7.26□□□□□ -1.25
RAPGEF1-202ENST00000372190 NF1P21359 2839 aa7.25□□□□□ -1.25
RAPGEF1-202ENST00000372190 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
RAPGEF1-202ENST00000372190 KRTAP13-3Q3SY46 172 aa7.22□□□□□ -1.25
RAPGEF1-202ENST00000372190 NBPF19A0A087WUL8 3843 aa7.21□□□□□ -1.26
RAPGEF1-202ENST00000372190 FBN2P35556 2912 aa7.21□□□□□ -1.26
RAPGEF1-202ENST00000372190 PRO2289Q9P1D8 64 aa7.2□□□□□ -1.26
RAPGEF1-202ENST00000372190 KRTAP10-10P60014 251 aa7.18□□□□□ -1.26
RAPGEF1-202ENST00000372190 PDZD2O15018 2839 aa7.18□□□□□ -1.26
RAPGEF1-202ENST00000372190 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
RAPGEF1-202ENST00000372190 MXRA5Q9NR99 2828 aa7.14□□□□□ -1.27
RAPGEF1-202ENST00000372190 RELNP78509 3460 aa7.13□□□□□ -1.27
RAPGEF1-202ENST00000372190 TENM1Q9UKZ4 2725 aa7.11□□□□□ -1.27
RAPGEF1-202ENST00000372190 ASPMQ8IZT6 3477 aa7.11□□□□□ -1.27
RAPGEF1-202ENST00000372190 KRTAP13-4Q3LI77 160 aa7.07□□□□□ -1.28
RAPGEF1-202ENST00000372190 CELSR1Q9NYQ6 3014 aa7.07□□□□□ -1.28
RAPGEF1-202ENST00000372190 ANK3Q12955 4377 aaKnown RBP7.03□□□□□ -1.28
RAPGEF1-202ENST00000372190 WDFY3Q8IZQ1 3526 aa7.03□□□□□ -1.28
RAPGEF1-202ENST00000372190 TENM3Q9P273 2699 aa7.01□□□□□ -1.29
RAPGEF1-202ENST00000372190 LAMA5O15230 3695 aa6.99□□□□□ -1.29
RAPGEF1-202ENST00000372190 DCHS1Q96JQ0 3298 aa6.98□□□□□ -1.29
RAPGEF1-202ENST00000372190 OTOGQ6ZRI0 2925 aa6.98□□□□□ -1.29
RAPGEF1-202ENST00000372190 DMDP11532 3685 aa6.93□□□□□ -1.3
RAPGEF1-202ENST00000372190 KRTAP15-1Q3LI76 137 aa6.92□□□□□ -1.3
RAPGEF1-202ENST00000372190 KRTAP12-1P59990 96 aa6.87□□□□□ -1.31
RAPGEF1-202ENST00000372190 ZFHX3Q15911 3703 aa6.86□□□□□ -1.31
RAPGEF1-202ENST00000372190 PKD1L1Q8TDX9 2849 aa6.86□□□□□ -1.31
RAPGEF1-202ENST00000372190 ZFHX4Q86UP3 3567 aa6.82□□□□□ -1.32
RAPGEF1-202ENST00000372190 FBN1P35555 2871 aaKnown RBP6.82□□□□□ -1.32
RAPGEF1-202ENST00000372190 KRTAP23-1A1A580 65 aa6.8□□□□□ -1.32
RAPGEF1-202ENST00000372190 MUC3AQ02505 3323 aa6.77□□□□□ -1.33
RAPGEF1-202ENST00000372190 VWFP04275 2813 aa6.72□□□□□ -1.33
RAPGEF1-202ENST00000372190 TGP01266 2768 aa6.68□□□□□ -1.34
RAPGEF1-202ENST00000372190 SMG1Q96Q15 3661 aaKnown RBP6.67□□□□□ -1.34
RAPGEF1-202ENST00000372190 CSMD1Q96PZ7 3565 aa6.66□□□□□ -1.34
RAPGEF1-202ENST00000372190 MT1HL1P0DM35 61 aa6.66□□□□□ -1.34
RAPGEF1-202ENST00000372190 KRTAP4-5Q9BYR2 181 aa6.66□□□□□ -1.34
RAPGEF1-202ENST00000372190 ALMS1Q8TCU4 4167 aa6.63□□□□□ -1.35
RAPGEF1-202ENST00000372190 KRTAP3-1Q9BYR8 98 aa6.61□□□□□ -1.35
RAPGEF1-202ENST00000372190 BSNQ9UPA5 3926 aa6.6□□□□□ -1.35
RAPGEF1-202ENST00000372190 HUWE1Q7Z6Z7 4374 aaKnown RBP6.6□□□□□ -1.35
RAPGEF1-202ENST00000372190 CSMD2Q7Z408 3487 aa6.6□□□□□ -1.35
RAPGEF1-202ENST00000372190 SPENQ96T58 3664 aaKnown RBP6.59□□□□□ -1.35
RAPGEF1-202ENST00000372190 TRRAPQ9Y4A5 3859 aa6.53□□□□□ -1.36
RAPGEF1-202ENST00000372190 KRTAP10-4P60372 401 aaPredicted RBP6.46□□□□□ -1.37
RAPGEF1-202ENST00000372190 KRTAP10-6P60371 365 aaPredicted RBP6.45□□□□□ -1.38
RAPGEF1-202ENST00000372190 FBN3Q75N90 2809 aa6.41□□□□□ -1.38
RAPGEF1-202ENST00000372190 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.39
RAPGEF1-202ENST00000372190 AKAP9Q99996 3911 aa6.31□□□□□ -1.4
RAPGEF1-202ENST00000372190 DNAH9Q9NYC9 4486 aa6.3□□□□□ -1.4
RAPGEF1-202ENST00000372190 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
RAPGEF1-202ENST00000372190 MEGF8Q7Z7M0 2845 aa6.25□□□□□ -1.41
RAPGEF1-202ENST00000372190 COL7A1Q02388 2944 aa6.22□□□□□ -1.41
RAPGEF1-202ENST00000372190 KRTAP10-12P60413 245 aa6.22□□□□□ -1.41
RAPGEF1-202ENST00000372190 KRTAP3-2Q9BYR7 98 aa6.21□□□□□ -1.41
RAPGEF1-202ENST00000372190 SRRM2Q9UQ35 2752 aaKnown RBP6.2□□□□□ -1.42
RAPGEF1-202ENST00000372190 CUBNO60494 3623 aa6.2□□□□□ -1.42
RAPGEF1-202ENST00000372190 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
RAPGEF1-202ENST00000372190 VPS13CQ709C8 3753 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms