RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 FRYLO94915 3013 aa7.54□□□□□ -1.2
RAPGEF1-201ENST00000372189 VCANP13611 3396 aa7.54□□□□□ -1.2
RAPGEF1-201ENST00000372189 COL12A1Q99715 3063 aa7.52□□□□□ -1.21
RAPGEF1-201ENST00000372189 DNAH14Q0VDD8 3507 aa7.52□□□□□ -1.21
RAPGEF1-201ENST00000372189 DMXL2Q8TDJ6 3036 aa7.52□□□□□ -1.21
RAPGEF1-201ENST00000372189 KRTAP13-2Q52LG2 175 aa7.52□□□□□ -1.21
RAPGEF1-201ENST00000372189 EYSQ5T1H1 3165 aa7.51□□□□□ -1.21
RAPGEF1-201ENST00000372189 KRTAP13-1Q8IUC0 172 aa7.5□□□□□ -1.21
RAPGEF1-201ENST00000372189 P0C880 135 aa7.47□□□□□ -1.21
RAPGEF1-201ENST00000372189 LRBAP50851 2863 aa7.45□□□□□ -1.22
RAPGEF1-201ENST00000372189 APCP25054 2843 aa7.45□□□□□ -1.22
RAPGEF1-201ENST00000372189 BOD1L1Q8NFC6 3051 aa7.43□□□□□ -1.22
RAPGEF1-201ENST00000372189 TACC2O95359 2948 aa7.43□□□□□ -1.22
RAPGEF1-201ENST00000372189 NBEAQ8NFP9 2946 aa7.39□□□□□ -1.23
RAPGEF1-201ENST00000372189 USP34Q70CQ2 3546 aa7.38□□□□□ -1.23
RAPGEF1-201ENST00000372189 KALRNO60229 2985 aa7.37□□□□□ -1.23
RAPGEF1-201ENST00000372189 ADGRG4Q8IZF6 3080 aa7.37□□□□□ -1.23
RAPGEF1-201ENST00000372189 TNP1P09430 55 aa7.36□□□□□ -1.23
RAPGEF1-201ENST00000372189 STAB2Q8WWQ8 2551 aa7.35□□□□□ -1.23
RAPGEF1-201ENST00000372189 DMXL1Q9Y485 3027 aa7.33□□□□□ -1.24
RAPGEF1-201ENST00000372189 TENM4Q6N022 2769 aa7.33□□□□□ -1.24
RAPGEF1-201ENST00000372189 CRYBG3Q68DQ2 2970 aa7.32□□□□□ -1.24
RAPGEF1-201ENST00000372189 REV3LO60673 3130 aa7.3□□□□□ -1.24
RAPGEF1-201ENST00000372189 ZZEF1O43149 2961 aa7.26□□□□□ -1.25
RAPGEF1-201ENST00000372189 DMBT1Q9UGM3 2413 aaPredicted RBP7.25□□□□□ -1.25
RAPGEF1-201ENST00000372189 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
RAPGEF1-201ENST00000372189 KRTAP1-4P0C5Y4 121 aa7.21□□□□□ -1.25
RAPGEF1-201ENST00000372189 SPEGQ15772 3267 aa7.21□□□□□ -1.25
RAPGEF1-201ENST00000372189 NIPBLQ6KC79 2804 aaeCLIP7.18□□□□□ -1.26
RAPGEF1-201ENST00000372189 CFAP47Q6ZTR5 3102 aa7.18□□□□□ -1.26
RAPGEF1-201ENST00000372189 HRNRQ86YZ3 2850 aaPredicted RBP7.17□□□□□ -1.26
RAPGEF1-201ENST00000372189 XP32Q5T750 250 aa7.14□□□□□ -1.27
RAPGEF1-201ENST00000372189 KRTAP10-8P60410 259 aa7.13□□□□□ -1.27
RAPGEF1-201ENST00000372189 ASH1LQ9NR48 2969 aaKnown RBP7.12□□□□□ -1.27
RAPGEF1-201ENST00000372189 ZANQ9Y493 2812 aa7.1□□□□□ -1.27
RAPGEF1-201ENST00000372189 CELSR2Q9HCU4 2923 aa7.1□□□□□ -1.27
RAPGEF1-201ENST00000372189 INE1O15225 51 aa7.09□□□□□ -1.27
RAPGEF1-201ENST00000372189 TPRXLQ17RH7 258 aa7.08□□□□□ -1.28
RAPGEF1-201ENST00000372189 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
RAPGEF1-201ENST00000372189 DCHS2Q6V1P9 2916 aa7.07□□□□□ -1.28
RAPGEF1-201ENST00000372189 H0YAA0 97 aa7.03□□□□□ -1.28
RAPGEF1-201ENST00000372189 LOC400499M0QZD8 3231 aa7.03□□□□□ -1.28
RAPGEF1-201ENST00000372189 MYO15AQ9UKN7 3530 aa6.99□□□□□ -1.29
RAPGEF1-201ENST00000372189 PRO2289Q9P1D8 64 aa6.97□□□□□ -1.29
RAPGEF1-201ENST00000372189 NF1P21359 2839 aa6.97□□□□□ -1.29
RAPGEF1-201ENST00000372189 KRTAP13-3Q3SY46 172 aa6.94□□□□□ -1.3
RAPGEF1-201ENST00000372189 FBN2P35556 2912 aa6.93□□□□□ -1.3
RAPGEF1-201ENST00000372189 TENM2Q9NT68 2774 aa6.91□□□□□ -1.3
RAPGEF1-201ENST00000372189 PDZD2O15018 2839 aa6.88□□□□□ -1.31
RAPGEF1-201ENST00000372189 MXRA5Q9NR99 2828 aa6.87□□□□□ -1.31
RAPGEF1-201ENST00000372189 RELNP78509 3460 aa6.84□□□□□ -1.31
RAPGEF1-201ENST00000372189 KRTAP10-10P60014 251 aa6.84□□□□□ -1.31
RAPGEF1-201ENST00000372189 TENM1Q9UKZ4 2725 aa6.82□□□□□ -1.32
RAPGEF1-201ENST00000372189 NBPF19A0A087WUL8 3843 aa6.81□□□□□ -1.32
RAPGEF1-201ENST00000372189 CELSR1Q9NYQ6 3014 aa6.8□□□□□ -1.32
RAPGEF1-201ENST00000372189 ASPMQ8IZT6 3477 aa6.78□□□□□ -1.32
RAPGEF1-201ENST00000372189 WDFY3Q8IZQ1 3526 aa6.75□□□□□ -1.33
RAPGEF1-201ENST00000372189 TENM3Q9P273 2699 aa6.74□□□□□ -1.33
RAPGEF1-201ENST00000372189 ANK3Q12955 4377 aaKnown RBP6.71□□□□□ -1.33
RAPGEF1-201ENST00000372189 LAMA5O15230 3695 aa6.7□□□□□ -1.34
RAPGEF1-201ENST00000372189 DCHS1Q96JQ0 3298 aa6.68□□□□□ -1.34
RAPGEF1-201ENST00000372189 OTOGQ6ZRI0 2925 aa6.68□□□□□ -1.34
RAPGEF1-201ENST00000372189 DMDP11532 3685 aa6.63□□□□□ -1.35
RAPGEF1-201ENST00000372189 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
RAPGEF1-201ENST00000372189 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
RAPGEF1-201ENST00000372189 ZFHX4Q86UP3 3567 aa6.58□□□□□ -1.36
RAPGEF1-201ENST00000372189 PKD1L1Q8TDX9 2849 aa6.57□□□□□ -1.36
RAPGEF1-201ENST00000372189 FBN1P35555 2871 aaKnown RBP6.51□□□□□ -1.37
RAPGEF1-201ENST00000372189 ZFHX3Q15911 3703 aa6.5□□□□□ -1.37
RAPGEF1-201ENST00000372189 VWFP04275 2813 aa6.46□□□□□ -1.38
RAPGEF1-201ENST00000372189 TGP01266 2768 aa6.46□□□□□ -1.38
RAPGEF1-201ENST00000372189 MUC3AQ02505 3323 aa6.46□□□□□ -1.38
RAPGEF1-201ENST00000372189 KRTAP13-4Q3LI77 160 aa6.45□□□□□ -1.38
RAPGEF1-201ENST00000372189 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
RAPGEF1-201ENST00000372189 CSMD1Q96PZ7 3565 aa6.42□□□□□ -1.38
RAPGEF1-201ENST00000372189 KRTAP3-1Q9BYR8 98 aa6.38□□□□□ -1.39
RAPGEF1-201ENST00000372189 MT1HL1P0DM35 61 aa6.37□□□□□ -1.39
RAPGEF1-201ENST00000372189 SMG1Q96Q15 3661 aaKnown RBP6.36□□□□□ -1.39
RAPGEF1-201ENST00000372189 BSNQ9UPA5 3926 aa6.31□□□□□ -1.4
RAPGEF1-201ENST00000372189 SPENQ96T58 3664 aaKnown RBP6.31□□□□□ -1.4
RAPGEF1-201ENST00000372189 HUWE1Q7Z6Z7 4374 aaKnown RBP6.31□□□□□ -1.4
RAPGEF1-201ENST00000372189 CSMD2Q7Z408 3487 aa6.3□□□□□ -1.4
RAPGEF1-201ENST00000372189 ALMS1Q8TCU4 4167 aa6.29□□□□□ -1.4
RAPGEF1-201ENST00000372189 CUBNO60494 3623 aa6.29□□□□□ -1.4
RAPGEF1-201ENST00000372189 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
RAPGEF1-201ENST00000372189 TRRAPQ9Y4A5 3859 aa6.26□□□□□ -1.41
RAPGEF1-201ENST00000372189 KRTAP10-6P60371 365 aaPredicted RBP6.24□□□□□ -1.41
RAPGEF1-201ENST00000372189 SVEP1Q4LDE5 3571 aa6.23□□□□□ -1.41
RAPGEF1-201ENST00000372189 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
RAPGEF1-201ENST00000372189 FBN3Q75N90 2809 aa6.11□□□□□ -1.43
RAPGEF1-201ENST00000372189 MEGF8Q7Z7M0 2845 aa6.07□□□□□ -1.44
RAPGEF1-201ENST00000372189 DNAH9Q9NYC9 4486 aa6.01□□□□□ -1.45
RAPGEF1-201ENST00000372189 KRTAP3-2Q9BYR7 98 aa6.01□□□□□ -1.45
RAPGEF1-201ENST00000372189 AKAP9Q99996 3911 aa5.99□□□□□ -1.45
RAPGEF1-201ENST00000372189 SRRM2Q9UQ35 2752 aaKnown RBP5.98□□□□□ -1.45
RAPGEF1-201ENST00000372189 KRTAP3-3Q9BYR6 98 aa5.97□□□□□ -1.45
RAPGEF1-201ENST00000372189 VPS13CQ709C8 3753 aa5.94□□□□□ -1.46
RAPGEF1-201ENST00000372189 COL7A1Q02388 2944 aa5.93□□□□□ -1.46
RAPGEF1-201ENST00000372189 KRTAP10-12P60413 245 aa5.81□□□□□ -1.48
RAPGEF1-201ENST00000372189 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms