RNA–Protein interactions for RNA: ENST00000369144.7

EIF3A-201, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3A, Length 6,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-201ENST00000369144 COL6A3P12111 3177 aa6.38□□□□□ -1.39
EIF3A-201ENST00000369144 KMT2BQ9UMN6 2715 aaPredicted RBP6.37□□□□□ -1.39
EIF3A-201ENST00000369144 NSD1Q96L73 2696 aaPredicted RBP6.35□□□□□ -1.39
EIF3A-201ENST00000369144 APCP25054 2843 aa6.35□□□□□ -1.39
EIF3A-201ENST00000369144 KRTAP13-3Q3SY46 172 aa6.34□□□□□ -1.4
EIF3A-201ENST00000369144 IGSF10Q6WRI0 2623 aa6.33□□□□□ -1.4
EIF3A-201ENST00000369144 BAHCC1Q9P281 2608 aa6.32□□□□□ -1.4
EIF3A-201ENST00000369144 FLNCQ14315 2725 aa6.31□□□□□ -1.4
EIF3A-201ENST00000369144 VPS13AQ96RL7 3174 aa6.3□□□□□ -1.4
EIF3A-201ENST00000369144 VCANP13611 3396 aa6.29□□□□□ -1.4
EIF3A-201ENST00000369144 ITPR2Q14571 2701 aa6.29□□□□□ -1.4
EIF3A-201ENST00000369144 KALRNO60229 2985 aa6.29□□□□□ -1.4
EIF3A-201ENST00000369144 KRTAP15-1Q3LI76 137 aa6.28□□□□□ -1.4
EIF3A-201ENST00000369144 CRCT1Q9UGL9 99 aa6.27□□□□□ -1.41
EIF3A-201ENST00000369144 FRYLO94915 3013 aa6.26□□□□□ -1.41
EIF3A-201ENST00000369144 CFAP47Q6ZTR5 3102 aa6.26□□□□□ -1.41
EIF3A-201ENST00000369144 LAMA1P25391 3075 aa6.25□□□□□ -1.41
EIF3A-201ENST00000369144 UBR5O95071 2799 aaPredicted RBP6.24□□□□□ -1.41
EIF3A-201ENST00000369144 DNAH14Q0VDD8 3507 aa6.24□□□□□ -1.41
EIF3A-201ENST00000369144 ASH1LQ9NR48 2969 aaKnown RBP6.23□□□□□ -1.41
EIF3A-201ENST00000369144 DMXL2Q8TDJ6 3036 aa6.22□□□□□ -1.41
EIF3A-201ENST00000369144 EYSQ5T1H1 3165 aa6.21□□□□□ -1.42
EIF3A-201ENST00000369144 KRTAP13-4Q3LI77 160 aa6.21□□□□□ -1.42
EIF3A-201ENST00000369144 MAP1AP78559 2803 aaPredicted RBP6.21□□□□□ -1.42
EIF3A-201ENST00000369144 HIVEP1P15822 2718 aa6.2□□□□□ -1.42
EIF3A-201ENST00000369144 ITPR1Q14643 2758 aa6.14□□□□□ -1.43
EIF3A-201ENST00000369144 KRTAP21-3Q3LHN1 58 aa6.14□□□□□ -1.43
EIF3A-201ENST00000369144 DMXL1Q9Y485 3027 aa6.13□□□□□ -1.43
EIF3A-201ENST00000369144 KRTAP12-1P59990 96 aa6.13□□□□□ -1.43
EIF3A-201ENST00000369144 SPTBN5Q9NRC6 3674 aaKnown RBP6.12□□□□□ -1.43
EIF3A-201ENST00000369144 UTP20O75691 2785 aaKnown RBP6.12□□□□□ -1.43
EIF3A-201ENST00000369144 LRBAP50851 2863 aa6.1□□□□□ -1.43
EIF3A-201ENST00000369144 SPEGQ15772 3267 aa6.09□□□□□ -1.43
EIF3A-201ENST00000369144 TACC2O95359 2948 aa6.07□□□□□ -1.44
EIF3A-201ENST00000369144 MUC3AQ02505 3323 aa6.06□□□□□ -1.44
EIF3A-201ENST00000369144 ATMQ13315 3056 aa6.06□□□□□ -1.44
EIF3A-201ENST00000369144 COL12A1Q99715 3063 aa6.05□□□□□ -1.44
EIF3A-201ENST00000369144 ZZEF1O43149 2961 aa6.05□□□□□ -1.44
EIF3A-201ENST00000369144 BOD1L1Q8NFC6 3051 aa6.03□□□□□ -1.44
EIF3A-201ENST00000369144 ADGRG4Q8IZF6 3080 aa5.96□□□□□ -1.46
EIF3A-201ENST00000369144 NBEAQ8NFP9 2946 aa5.93□□□□□ -1.46
EIF3A-201ENST00000369144 TGP01266 2768 aa5.9□□□□□ -1.46
EIF3A-201ENST00000369144 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
EIF3A-201ENST00000369144 LOC400499M0QZD8 3231 aa5.87□□□□□ -1.47
EIF3A-201ENST00000369144 CELSR2Q9HCU4 2923 aa5.87□□□□□ -1.47
EIF3A-201ENST00000369144 TENM4Q6N022 2769 aa5.86□□□□□ -1.47
EIF3A-201ENST00000369144 ZANQ9Y493 2812 aa5.85□□□□□ -1.47
EIF3A-201ENST00000369144 TENM1Q9UKZ4 2725 aa5.83□□□□□ -1.48
EIF3A-201ENST00000369144 MYO15AQ9UKN7 3530 aa5.82□□□□□ -1.48
EIF3A-201ENST00000369144 USP34Q70CQ2 3546 aa5.82□□□□□ -1.48
EIF3A-201ENST00000369144 TENM2Q9NT68 2774 aa5.81□□□□□ -1.48
EIF3A-201ENST00000369144 INE1O15225 51 aa5.8□□□□□ -1.48
EIF3A-201ENST00000369144 KRTAP10-12P60413 245 aa5.78□□□□□ -1.48
EIF3A-201ENST00000369144 DCHS1Q96JQ0 3298 aa5.78□□□□□ -1.48
EIF3A-201ENST00000369144 TENM3Q9P273 2699 aa5.77□□□□□ -1.49
EIF3A-201ENST00000369144 DCHS2Q6V1P9 2916 aa5.76□□□□□ -1.49
EIF3A-201ENST00000369144 HRNRQ86YZ3 2850 aaPredicted RBP5.76□□□□□ -1.49
EIF3A-201ENST00000369144 ZFHX4Q86UP3 3567 aa5.75□□□□□ -1.49
EIF3A-201ENST00000369144 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
EIF3A-201ENST00000369144 ASPMQ8IZT6 3477 aa5.71□□□□□ -1.49
EIF3A-201ENST00000369144 CELSR1Q9NYQ6 3014 aa5.71□□□□□ -1.5
EIF3A-201ENST00000369144 NF1P21359 2839 aa5.7□□□□□ -1.5
EIF3A-201ENST00000369144 DMDP11532 3685 aa5.7□□□□□ -1.5
EIF3A-201ENST00000369144 NIPBLQ6KC79 2804 aaeCLIP5.67□□□□□ -1.5
EIF3A-201ENST00000369144 KRTAP10-5P60370 271 aa5.66□□□□□ -1.5
EIF3A-201ENST00000369144 WDFY3Q8IZQ1 3526 aa5.64□□□□□ -1.51
EIF3A-201ENST00000369144 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
EIF3A-201ENST00000369144 PDZD2O15018 2839 aa5.61□□□□□ -1.51
EIF3A-201ENST00000369144 LAMA5O15230 3695 aa5.61□□□□□ -1.51
EIF3A-201ENST00000369144 FBN2P35556 2912 aa5.61□□□□□ -1.51
EIF3A-201ENST00000369144 KRTAP12-3P60328 96 aa5.59□□□□□ -1.51
EIF3A-201ENST00000369144 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
EIF3A-201ENST00000369144 NBPF19A0A087WUL8 3843 aa5.58□□□□□ -1.52
EIF3A-201ENST00000369144 RELNP78509 3460 aa5.56□□□□□ -1.52
EIF3A-201ENST00000369144 VWFP04275 2813 aa5.54□□□□□ -1.52
EIF3A-201ENST00000369144 OTOGQ6ZRI0 2925 aa5.53□□□□□ -1.52
EIF3A-201ENST00000369144 PKD1L1Q8TDX9 2849 aa5.51□□□□□ -1.53
EIF3A-201ENST00000369144 CSMD1Q96PZ7 3565 aa5.49□□□□□ -1.53
EIF3A-201ENST00000369144 SMG1Q96Q15 3661 aaKnown RBP5.46□□□□□ -1.54
EIF3A-201ENST00000369144 KRTAP3-2Q9BYR7 98 aa5.45□□□□□ -1.54
EIF3A-201ENST00000369144 KRTAP3-3Q9BYR6 98 aa5.44□□□□□ -1.54
EIF3A-201ENST00000369144 LORP23490 312 aaPredicted RBP5.44□□□□□ -1.54
EIF3A-201ENST00000369144 KRTAP8-1Q8IUC2 63 aa5.4□□□□□ -1.55
EIF3A-201ENST00000369144 KRTAP4-5Q9BYR2 181 aa5.39□□□□□ -1.55
EIF3A-201ENST00000369144 MT1HL1P0DM35 61 aa5.37□□□□□ -1.55
EIF3A-201ENST00000369144 FBN1P35555 2871 aaKnown RBP5.27□□□□□ -1.57
EIF3A-201ENST00000369144 SPENQ96T58 3664 aaKnown RBP5.26□□□□□ -1.57
EIF3A-201ENST00000369144 ZFHX3Q15911 3703 aa5.24□□□□□ -1.57
EIF3A-201ENST00000369144 MEGF8Q7Z7M0 2845 aa5.21□□□□□ -1.58
EIF3A-201ENST00000369144 BSNQ9UPA5 3926 aa5.15□□□□□ -1.58
EIF3A-201ENST00000369144 SVEP1Q4LDE5 3571 aa5.15□□□□□ -1.59
EIF3A-201ENST00000369144 SRRM2Q9UQ35 2752 aaKnown RBP5.15□□□□□ -1.59
EIF3A-201ENST00000369144 FBN3Q75N90 2809 aa5.13□□□□□ -1.59
EIF3A-201ENST00000369144 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
EIF3A-201ENST00000369144 CUBNO60494 3623 aa5.1□□□□□ -1.59
EIF3A-201ENST00000369144 COL7A1Q02388 2944 aa5.09□□□□□ -1.59
EIF3A-201ENST00000369144 ANK3Q12955 4377 aaKnown RBP5.09□□□□□ -1.6
EIF3A-201ENST00000369144 CSMD2Q7Z408 3487 aa5.07□□□□□ -1.6
EIF3A-201ENST00000369144 HUWE1Q7Z6Z7 4374 aaKnown RBP5.03□□□□□ -1.6
EIF3A-201ENST00000369144 SPRR2FQ96RM1 72 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms