RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 CDH23Q9H251 3354 aa8.64□□□□□ -1.03
NID1-202ENST00000366595 A0A1B0GVY2 172 aa8.64□□□□□ -1.03
NID1-202ENST00000366595 IGSF10Q6WRI0 2623 aa8.63□□□□□ -1.03
NID1-202ENST00000366595 VCANP13611 3396 aa8.62□□□□□ -1.03
NID1-202ENST00000366595 LAMA1P25391 3075 aa8.62□□□□□ -1.03
NID1-202ENST00000366595 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
NID1-202ENST00000366595 UBR5O95071 2799 aaPredicted RBP8.58□□□□□ -1.04
NID1-202ENST00000366595 ASH1LQ9NR48 2969 aaKnown RBP8.54□□□□□ -1.04
NID1-202ENST00000366595 ADGRG4Q8IZF6 3080 aa8.53□□□□□ -1.04
NID1-202ENST00000366595 KRTAP21-3Q3LHN1 58 aa8.52□□□□□ -1.05
NID1-202ENST00000366595 LRBAP50851 2863 aa8.5□□□□□ -1.05
NID1-202ENST00000366595 FRYLO94915 3013 aa8.47□□□□□ -1.05
NID1-202ENST00000366595 APCP25054 2843 aa8.47□□□□□ -1.05
NID1-202ENST00000366595 DMXL2Q8TDJ6 3036 aa8.47□□□□□ -1.05
NID1-202ENST00000366595 KRTAP13-3Q3SY46 172 aa8.45□□□□□ -1.06
NID1-202ENST00000366595 KRTAP13-4Q3LI77 160 aa8.44□□□□□ -1.06
NID1-202ENST00000366595 TACC2O95359 2948 aa8.43□□□□□ -1.06
NID1-202ENST00000366595 ATMQ13315 3056 aa8.43□□□□□ -1.06
NID1-202ENST00000366595 BOD1L1Q8NFC6 3051 aa8.42□□□□□ -1.06
NID1-202ENST00000366595 SZT2Q5T011 3432 aa8.38□□□□□ -1.07
NID1-202ENST00000366595 REV3LO60673 3130 aa8.37□□□□□ -1.07
NID1-202ENST00000366595 ZZEF1O43149 2961 aa8.37□□□□□ -1.07
NID1-202ENST00000366595 COL6A3P12111 3177 aa8.37□□□□□ -1.07
NID1-202ENST00000366595 KMT2BQ9UMN6 2715 aaPredicted RBP8.36□□□□□ -1.07
NID1-202ENST00000366595 UTP20O75691 2785 aaKnown RBP8.35□□□□□ -1.07
NID1-202ENST00000366595 KRTAP12-2P59991 146 aa8.34□□□□□ -1.07
NID1-202ENST00000366595 HIVEP1P15822 2718 aa8.3□□□□□ -1.08
NID1-202ENST00000366595 ITPR2Q14571 2701 aa8.3□□□□□ -1.08
NID1-202ENST00000366595 FLNCQ14315 2725 aa8.29□□□□□ -1.08
NID1-202ENST00000366595 COL12A1Q99715 3063 aa8.29□□□□□ -1.08
NID1-202ENST00000366595 CFAP47Q6ZTR5 3102 aa8.25□□□□□ -1.09
NID1-202ENST00000366595 KRTAP12-1P59990 96 aa8.23□□□□□ -1.09
NID1-202ENST00000366595 SPEGQ15772 3267 aa8.21□□□□□ -1.09
NID1-202ENST00000366595 CELSR2Q9HCU4 2923 aa8.19□□□□□ -1.1
NID1-202ENST00000366595 INE1O15225 51 aa8.19□□□□□ -1.1
NID1-202ENST00000366595 NIPBLQ6KC79 2804 aaeCLIP8.17□□□□□ -1.1
NID1-202ENST00000366595 KRTAP15-1Q3LI76 137 aa8.13□□□□□ -1.11
NID1-202ENST00000366595 ZANQ9Y493 2812 aa8.11□□□□□ -1.11
NID1-202ENST00000366595 TNRC18O15417 2968 aaPredicted RBP8.08□□□□□ -1.12
NID1-202ENST00000366595 HRNRQ86YZ3 2850 aaPredicted RBP8.07□□□□□ -1.12
NID1-202ENST00000366595 DCHS2Q6V1P9 2916 aa8.05□□□□□ -1.12
NID1-202ENST00000366595 DMXL1Q9Y485 3027 aa8.05□□□□□ -1.12
NID1-202ENST00000366595 FBN2P35556 2912 aa7.99□□□□□ -1.13
NID1-202ENST00000366595 USP34Q70CQ2 3546 aa7.98□□□□□ -1.13
NID1-202ENST00000366595 SPTBN5Q9NRC6 3674 aaKnown RBP7.95□□□□□ -1.14
NID1-202ENST00000366595 TENM4Q6N022 2769 aa7.93□□□□□ -1.14
NID1-202ENST00000366595 LOC400499M0QZD8 3231 aa7.93□□□□□ -1.14
NID1-202ENST00000366595 EYSQ5T1H1 3165 aa7.91□□□□□ -1.14
NID1-202ENST00000366595 NF1P21359 2839 aa7.89□□□□□ -1.15
NID1-202ENST00000366595 TGP01266 2768 aa7.89□□□□□ -1.15
NID1-202ENST00000366595 KRTAP3-1Q9BYR8 98 aa7.89□□□□□ -1.15
NID1-202ENST00000366595 TENM3Q9P273 2699 aa7.85□□□□□ -1.15
NID1-202ENST00000366595 MYO15AQ9UKN7 3530 aa7.84□□□□□ -1.15
NID1-202ENST00000366595 CRYBG3Q68DQ2 2970 aa7.82□□□□□ -1.16
NID1-202ENST00000366595 KRTAP10-6P60371 365 aaPredicted RBP7.81□□□□□ -1.16
NID1-202ENST00000366595 MXRA5Q9NR99 2828 aa7.72□□□□□ -1.17
NID1-202ENST00000366595 DCHS1Q96JQ0 3298 aa7.69□□□□□ -1.18
NID1-202ENST00000366595 WDFY3Q8IZQ1 3526 aa7.69□□□□□ -1.18
NID1-202ENST00000366595 CELSR1Q9NYQ6 3014 aa7.68□□□□□ -1.18
NID1-202ENST00000366595 TENM1Q9UKZ4 2725 aa7.64□□□□□ -1.19
NID1-202ENST00000366595 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
NID1-202ENST00000366595 TENM2Q9NT68 2774 aa7.58□□□□□ -1.2
NID1-202ENST00000366595 KRTAP23-1A1A580 65 aa7.58□□□□□ -1.2
NID1-202ENST00000366595 ZFHX4Q86UP3 3567 aa7.57□□□□□ -1.2
NID1-202ENST00000366595 CSMD1Q96PZ7 3565 aa7.57□□□□□ -1.2
NID1-202ENST00000366595 PDZD2O15018 2839 aa7.56□□□□□ -1.2
NID1-202ENST00000366595 RELNP78509 3460 aa7.54□□□□□ -1.2
NID1-202ENST00000366595 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
NID1-202ENST00000366595 KRTAP12-3P60328 96 aa7.43□□□□□ -1.22
NID1-202ENST00000366595 CRCT1Q9UGL9 99 aa7.4□□□□□ -1.22
NID1-202ENST00000366595 ASPMQ8IZT6 3477 aa7.38□□□□□ -1.23
NID1-202ENST00000366595 SMG1Q96Q15 3661 aaKnown RBP7.37□□□□□ -1.23
NID1-202ENST00000366595 KRTAP3-3Q9BYR6 98 aa7.34□□□□□ -1.23
NID1-202ENST00000366595 PKD1L1Q8TDX9 2849 aa7.33□□□□□ -1.24
NID1-202ENST00000366595 LAMA5O15230 3695 aa7.28□□□□□ -1.24
NID1-202ENST00000366595 VWFP04275 2813 aa7.22□□□□□ -1.25
NID1-202ENST00000366595 SVEP1Q4LDE5 3571 aa7.2□□□□□ -1.26
NID1-202ENST00000366595 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
NID1-202ENST00000366595 MT1HL1P0DM35 61 aa7.14□□□□□ -1.27
NID1-202ENST00000366595 FBN1P35555 2871 aaKnown RBP7.14□□□□□ -1.27
NID1-202ENST00000366595 FBN3Q75N90 2809 aa7.14□□□□□ -1.27
NID1-202ENST00000366595 SRRM2Q9UQ35 2752 aaKnown RBP7.13□□□□□ -1.27
NID1-202ENST00000366595 CUBNO60494 3623 aa7.12□□□□□ -1.27
NID1-202ENST00000366595 KRTAP10-5P60370 271 aa7.1□□□□□ -1.27
NID1-202ENST00000366595 MEGF8Q7Z7M0 2845 aa7.08□□□□□ -1.28
NID1-202ENST00000366595 DMDP11532 3685 aa7.06□□□□□ -1.28
NID1-202ENST00000366595 NBPF19A0A087WUL8 3843 aa6.96□□□□□ -1.3
NID1-202ENST00000366595 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
NID1-202ENST00000366595 ZFHX3Q15911 3703 aa6.93□□□□□ -1.3
NID1-202ENST00000366595 ANK3Q12955 4377 aaKnown RBP6.89□□□□□ -1.31
NID1-202ENST00000366595 OTOGQ6ZRI0 2925 aa6.89□□□□□ -1.31
NID1-202ENST00000366595 KRTAP8-1Q8IUC2 63 aa6.87□□□□□ -1.31
NID1-202ENST00000366595 MUC3AQ02505 3323 aa6.84□□□□□ -1.31
NID1-202ENST00000366595 COL7A1Q02388 2944 aa6.84□□□□□ -1.31
NID1-202ENST00000366595 KRTAP10-4P60372 401 aaPredicted RBP6.8□□□□□ -1.32
NID1-202ENST00000366595 TRRAPQ9Y4A5 3859 aa6.8□□□□□ -1.32
NID1-202ENST00000366595 CSMD2Q7Z408 3487 aa6.79□□□□□ -1.32
NID1-202ENST00000366595 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
NID1-202ENST00000366595 VPS13CQ709C8 3753 aa6.62□□□□□ -1.35
NID1-202ENST00000366595 BSNQ9UPA5 3926 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms