RNA–Protein interactions for RNA: ENST00000364033.1

RNU1-42P-201, Transcript of RNA, U1 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU1-42P, Length 160 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-42P-201ENST00000364033 A0A0U1RQV1 116 aa0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 HCG22E2RYF7 251 aa0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 H7BZZ5 65 aa0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 CNBPP62633 177 aaKnown RBP0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 SPRR4Q96PI1 79 aa0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 RETNLBQ9BQ08 111 aa0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 HIGD2AQ9BW72 106 aa0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 OCR1Q9BZK8 76 aa0.93□□□□□ -2.26
RNU1-42P-201ENST00000364033 FAT4Q6V0I7 4981 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 IGLV8-61A0A075B6I0 122 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 A0A1W2PNM2 257 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 IGLV7-43P04211 117 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 IGKV4-1P06312 121 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 SPRR1AP35321 89 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 Q1T7F1 81 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 KRTAP20-1Q3LI63 56 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 HRCT1Q6UXD1 115 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 CASC2Q6XLA1 102 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 KRTAP7-1Q8IUC3 87 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 PRR15Q8IV56 129 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 ST20-AS1Q8NBB2 130 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 Q8NBF4 154 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 Q8NDZ9 215 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 C1orf64Q8NEQ6 169 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 MPLKIPQ8TAP9 179 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 LINC00208Q96KT6 92 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 Q9BRP9 147 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 LIMD2Q9BT23 127 aa0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 ZNF706Q9Y5V0 76 aaPredicted RBP0.92□□□□□ -2.26
RNU1-42P-201ENST00000364033 A0A087WSZ3 146 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 A8MWP4 228 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 KRTAP4-16G5E9R7 235 aaPredicted RBP0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 KRTAP1-4P0C5Y4 121 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 SPRR1BP22528 89 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 DSCR10P59022 87 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 PMAIP1Q13794 54 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 DEFB116Q30KQ4 102 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 C4orf48Q5BLP8 95 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 C1orf195Q5TG92 126 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 IGFL1Q6UW32 110 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 SSBP3-AS1Q7Z2R9 100 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 SMIM29Q86T20 159 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 Q8N9L7 120 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 SPANXA2-OT1Q8N9U9 137 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 BRK1Q8WUW1 75 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 CYP4F30PQ9H0H9 118 aa0.91□□□□□ -2.26
RNU1-42P-201ENST00000364033 IGLV7-46A0A075B6I9 117 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 A0A087X002 238 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 H0Y9P7 68 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 CHKB-CPT1BH3BT56 60 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 PSPHP1O15172 72 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 NDUFS5O43920 106 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 ZNF861PO60384 105 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 ACYP2P14621 99 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 LCE2AQ5TA79 106 aaPredicted RBP0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 Q5XG85 94 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 ATP11AUNQ6ZP68 121 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 FP248Q71RG6 208 aaPredicted RBP0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 WFDC13Q8IUB5 93 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 TYMSOSQ8TAI1 123 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 CYSTM1Q9H1C7 97 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 LINC00472Q9H8W2 130 aa0.9□□□□□ -2.27
RNU1-42P-201ENST00000364033 IGHV6-1A0A0B4J1U7 121 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 IGLV9-49A0A0B4J1Y8 123 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 TRAV22A0A0B4J277 110 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 K7EQZ3 153 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 LINC00313P59037 77 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 SEC61GP60059 68 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 PRLHP81277 87 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 CD164Q04900 197 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 KRTAP13-2Q52LG2 175 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 Q8N9P0 234 aaPredicted RBP0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 ZCCHC13Q8WW36 166 aaKnown RBP0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 PRR15LQ9BU68 103 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 KRTAP4-1Q9BYQ7 146 aa0.89□□□□□ -2.27
RNU1-42P-201ENST00000364033 A0A0G2JQZ4 141 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 LOC101927531A0A1B0GV80 90 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 A0A1B0GVX0 72 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 A6NED7 52 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 A8MUN3 132 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 C8orf87E5RJ46 101 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 SPAG11AQ6PDA7 123 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 LINC00304Q8N9R0 145 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 SPTSSBQ8NFR3 76 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 MRPL34Q9BQ48 92 aaKnown RBP0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 C8orf17Q9NRJ1 99 aa0.88□□□□□ -2.27
RNU1-42P-201ENST00000364033 MOBPQ13875 183 aa0.87□□□□□ -2.27
RNU1-42P-201ENST00000364033 ASB16-AS1Q495Z4 193 aa0.87□□□□□ -2.27
RNU1-42P-201ENST00000364033 LINC00483Q53H64 154 aa0.87□□□□□ -2.27
RNU1-42P-201ENST00000364033 PCOTHQ58A44 107 aa0.87□□□□□ -2.27
RNU1-42P-201ENST00000364033 COA5Q86WW8 74 aa0.87□□□□□ -2.27
RNU1-42P-201ENST00000364033 LINC01558Q9Y6Z2 57 aa0.87□□□□□ -2.27
RNU1-42P-201ENST00000364033 SYNE2Q8WXH0 6885 aaKnown RBP0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 MMP24-AS1A0A0U1RRL7 71 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 A0A1B0GU69 56 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 C9orf92A6NGG3 77 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 SPINK1P00995 79 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 HRES1P13985 223 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 FAM229BQ4G0N7 80 aa0.86□□□□□ -2.27
RNU1-42P-201ENST00000364033 Q75L30 129 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms