RNA–Protein interactions for RNA: ENST00000361971.9

PLXNB3-201, Transcript of plexin B3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PLXNB3, Length 6,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-201ENST00000361971 LRBAP50851 2863 aa8.94□□□□□ -0.98
PLXNB3-201ENST00000361971 UTP20O75691 2785 aaKnown RBP8.93□□□□□ -0.98
PLXNB3-201ENST00000361971 H3BS24 57 aa8.92□□□□□ -0.98
PLXNB3-201ENST00000361971 FRYLO94915 3013 aa8.92□□□□□ -0.98
PLXNB3-201ENST00000361971 HIVEP1P15822 2718 aa8.91□□□□□ -0.98
PLXNB3-201ENST00000361971 DMXL2Q8TDJ6 3036 aa8.89□□□□□ -0.99
PLXNB3-201ENST00000361971 XP32Q5T750 250 aa8.88□□□□□ -0.99
PLXNB3-201ENST00000361971 BOD1L1Q8NFC6 3051 aa8.88□□□□□ -0.99
PLXNB3-201ENST00000361971 TNP1P09430 55 aa8.87□□□□□ -0.99
PLXNB3-201ENST00000361971 KRTAP1-4P0C5Y4 121 aa8.85□□□□□ -0.99
PLXNB3-201ENST00000361971 CFAP47Q6ZTR5 3102 aa8.85□□□□□ -0.99
PLXNB3-201ENST00000361971 FLNCQ14315 2725 aa8.84□□□□□ -0.99
PLXNB3-201ENST00000361971 KRTAP25-1Q3LHN0 102 aa8.82□□□□□ -1
PLXNB3-201ENST00000361971 APCP25054 2843 aa8.82□□□□□ -1
PLXNB3-201ENST00000361971 EYSQ5T1H1 3165 aa8.82□□□□□ -1
PLXNB3-201ENST00000361971 SPTBN5Q9NRC6 3674 aaKnown RBP8.82□□□□□ -1
PLXNB3-201ENST00000361971 TENM4Q6N022 2769 aa8.8□□□□□ -1
PLXNB3-201ENST00000361971 KRTAP10-8P60410 259 aa8.79□□□□□ -1
PLXNB3-201ENST00000361971 ADGRG4Q8IZF6 3080 aa8.79□□□□□ -1
PLXNB3-201ENST00000361971 USP34Q70CQ2 3546 aa8.74□□□□□ -1.01
PLXNB3-201ENST00000361971 ASH1LQ9NR48 2969 aaKnown RBP8.74□□□□□ -1.01
PLXNB3-201ENST00000361971 A6NN06 94 aa8.71□□□□□ -1.02
PLXNB3-201ENST00000361971 TNRC18O15417 2968 aaPredicted RBP8.7□□□□□ -1.02
PLXNB3-201ENST00000361971 C10orf95Q9H7T3 257 aa8.69□□□□□ -1.02
PLXNB3-201ENST00000361971 SPEGQ15772 3267 aa8.69□□□□□ -1.02
PLXNB3-201ENST00000361971 KRTAP10-10P60014 251 aa8.69□□□□□ -1.02
PLXNB3-201ENST00000361971 TPRXLQ17RH7 258 aa8.69□□□□□ -1.02
PLXNB3-201ENST00000361971 NBEAQ8NFP9 2946 aa8.65□□□□□ -1.03
PLXNB3-201ENST00000361971 ZZEF1O43149 2961 aa8.62□□□□□ -1.03
PLXNB3-201ENST00000361971 CELSR2Q9HCU4 2923 aa8.61□□□□□ -1.03
PLXNB3-201ENST00000361971 KRTAP13-3Q3SY46 172 aa8.55□□□□□ -1.04
PLXNB3-201ENST00000361971 DMXL1Q9Y485 3027 aa8.53□□□□□ -1.04
PLXNB3-201ENST00000361971 DCHS2Q6V1P9 2916 aa8.52□□□□□ -1.05
PLXNB3-201ENST00000361971 NDUFAF8A1L188 74 aa8.52□□□□□ -1.05
PLXNB3-201ENST00000361971 NIPBLQ6KC79 2804 aaeCLIP8.51□□□□□ -1.05
PLXNB3-201ENST00000361971 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
PLXNB3-201ENST00000361971 PRO2289Q9P1D8 64 aa8.45□□□□□ -1.06
PLXNB3-201ENST00000361971 PP632Q6XCG6 107 aa8.41□□□□□ -1.06
PLXNB3-201ENST00000361971 TENM2Q9NT68 2774 aa8.41□□□□□ -1.06
PLXNB3-201ENST00000361971 H0YAA0 97 aa8.39□□□□□ -1.07
PLXNB3-201ENST00000361971 ZANQ9Y493 2812 aa8.39□□□□□ -1.07
PLXNB3-201ENST00000361971 HRNRQ86YZ3 2850 aaPredicted RBP8.37□□□□□ -1.07
PLXNB3-201ENST00000361971 MYO15AQ9UKN7 3530 aa8.37□□□□□ -1.07
PLXNB3-201ENST00000361971 P0C880 135 aa8.36□□□□□ -1.07
PLXNB3-201ENST00000361971 TENM1Q9UKZ4 2725 aa8.34□□□□□ -1.07
PLXNB3-201ENST00000361971 NF1P21359 2839 aa8.32□□□□□ -1.08
PLXNB3-201ENST00000361971 LOC400499M0QZD8 3231 aa8.3□□□□□ -1.08
PLXNB3-201ENST00000361971 FBN2P35556 2912 aa8.25□□□□□ -1.09
PLXNB3-201ENST00000361971 CELSR1Q9NYQ6 3014 aa8.22□□□□□ -1.09
PLXNB3-201ENST00000361971 TENM3Q9P273 2699 aa8.18□□□□□ -1.1
PLXNB3-201ENST00000361971 NBPF19A0A087WUL8 3843 aa8.17□□□□□ -1.1
PLXNB3-201ENST00000361971 WDFY3Q8IZQ1 3526 aa8.17□□□□□ -1.1
PLXNB3-201ENST00000361971 ASPMQ8IZT6 3477 aa8.16□□□□□ -1.1
PLXNB3-201ENST00000361971 RELNP78509 3460 aa8.14□□□□□ -1.11
PLXNB3-201ENST00000361971 PKD1L1Q8TDX9 2849 aa8.04□□□□□ -1.12
PLXNB3-201ENST00000361971 MXRA5Q9NR99 2828 aa8.02□□□□□ -1.13
PLXNB3-201ENST00000361971 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
PLXNB3-201ENST00000361971 TGP01266 2768 aa8□□□□□ -1.13
PLXNB3-201ENST00000361971 DCHS1Q96JQ0 3298 aa7.97□□□□□ -1.13
PLXNB3-201ENST00000361971 VWFP04275 2813 aa7.94□□□□□ -1.14
PLXNB3-201ENST00000361971 ZFHX4Q86UP3 3567 aa7.9□□□□□ -1.14
PLXNB3-201ENST00000361971 PDZD2O15018 2839 aa7.89□□□□□ -1.15
PLXNB3-201ENST00000361971 LAMA5O15230 3695 aa7.89□□□□□ -1.15
PLXNB3-201ENST00000361971 ANK3Q12955 4377 aaKnown RBP7.84□□□□□ -1.15
PLXNB3-201ENST00000361971 KRTAP13-4Q3LI77 160 aa7.84□□□□□ -1.15
PLXNB3-201ENST00000361971 DMDP11532 3685 aa7.83□□□□□ -1.16
PLXNB3-201ENST00000361971 KRTAP12-1P59990 96 aa7.8□□□□□ -1.16
PLXNB3-201ENST00000361971 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
PLXNB3-201ENST00000361971 ZFHX3Q15911 3703 aa7.79□□□□□ -1.16
PLXNB3-201ENST00000361971 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
PLXNB3-201ENST00000361971 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
PLXNB3-201ENST00000361971 OTOGQ6ZRI0 2925 aa7.67□□□□□ -1.18
PLXNB3-201ENST00000361971 MT1HL1P0DM35 61 aa7.66□□□□□ -1.18
PLXNB3-201ENST00000361971 SMG1Q96Q15 3661 aaKnown RBP7.66□□□□□ -1.18
PLXNB3-201ENST00000361971 KRTAP4-5Q9BYR2 181 aa7.63□□□□□ -1.19
PLXNB3-201ENST00000361971 FBN1P35555 2871 aaKnown RBP7.62□□□□□ -1.19
PLXNB3-201ENST00000361971 CSMD2Q7Z408 3487 aa7.52□□□□□ -1.21
PLXNB3-201ENST00000361971 KRTAP10-6P60371 365 aaPredicted RBP7.51□□□□□ -1.21
PLXNB3-201ENST00000361971 CRCT1Q9UGL9 99 aa7.49□□□□□ -1.21
PLXNB3-201ENST00000361971 HUWE1Q7Z6Z7 4374 aaKnown RBP7.46□□□□□ -1.21
PLXNB3-201ENST00000361971 SVEP1Q4LDE5 3571 aa7.45□□□□□ -1.22
PLXNB3-201ENST00000361971 MUC3AQ02505 3323 aa7.45□□□□□ -1.22
PLXNB3-201ENST00000361971 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
PLXNB3-201ENST00000361971 FBN3Q75N90 2809 aa7.41□□□□□ -1.22
PLXNB3-201ENST00000361971 SRRM2Q9UQ35 2752 aaKnown RBP7.41□□□□□ -1.22
PLXNB3-201ENST00000361971 SPENQ96T58 3664 aaKnown RBP7.38□□□□□ -1.23
PLXNB3-201ENST00000361971 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
PLXNB3-201ENST00000361971 ALMS1Q8TCU4 4167 aa7.36□□□□□ -1.23
PLXNB3-201ENST00000361971 KRTAP10-4P60372 401 aaPredicted RBP7.36□□□□□ -1.23
PLXNB3-201ENST00000361971 MEGF8Q7Z7M0 2845 aa7.33□□□□□ -1.24
PLXNB3-201ENST00000361971 BSNQ9UPA5 3926 aa7.32□□□□□ -1.24
PLXNB3-201ENST00000361971 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
PLXNB3-201ENST00000361971 CUBNO60494 3623 aa7.24□□□□□ -1.25
PLXNB3-201ENST00000361971 COL7A1Q02388 2944 aa7.24□□□□□ -1.25
PLXNB3-201ENST00000361971 KRTAP3-2Q9BYR7 98 aa7.24□□□□□ -1.25
PLXNB3-201ENST00000361971 KRTAP12-3P60328 96 aa7.09□□□□□ -1.27
PLXNB3-201ENST00000361971 VPS13CQ709C8 3753 aa7.07□□□□□ -1.28
PLXNB3-201ENST00000361971 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
PLXNB3-201ENST00000361971 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
PLXNB3-201ENST00000361971 DNAH9Q9NYC9 4486 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms