RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CELSR2Q9HCU4 2923 aa7.56□□□□□ -1.2
LDB3-202ENST00000361373 PLAC4Q8WY50 150 aa7.56□□□□□ -1.2
LDB3-202ENST00000361373 ROMO1P60602 79 aa7.55□□□□□ -1.2
LDB3-202ENST00000361373 ZANQ9Y493 2812 aa7.54□□□□□ -1.2
LDB3-202ENST00000361373 CELSR3Q9NYQ7 3312 aa7.53□□□□□ -1.2
LDB3-202ENST00000361373 DCHS2Q6V1P9 2916 aa7.51□□□□□ -1.21
LDB3-202ENST00000361373 ASH1LQ9NR48 2969 aaKnown RBP7.5□□□□□ -1.21
LDB3-202ENST00000361373 VCANP13611 3396 aa7.49□□□□□ -1.21
LDB3-202ENST00000361373 A8MUU9 505 aa7.48□□□□□ -1.21
LDB3-202ENST00000361373 CRYBG3Q68DQ2 2970 aa7.47□□□□□ -1.21
LDB3-202ENST00000361373 C20orf166-AS1Q96NR2 134 aa7.46□□□□□ -1.21
LDB3-202ENST00000361373 COL6A3P12111 3177 aa7.46□□□□□ -1.22
LDB3-202ENST00000361373 SPATA8Q6RVD6 105 aa7.45□□□□□ -1.22
LDB3-202ENST00000361373 PRAC1Q96KF2 57 aa7.43□□□□□ -1.22
LDB3-202ENST00000361373 FREM2Q5SZK8 3169 aa7.4□□□□□ -1.22
LDB3-202ENST00000361373 KRTAP1-4P0C5Y4 121 aa7.4□□□□□ -1.22
LDB3-202ENST00000361373 HRNRQ86YZ3 2850 aaPredicted RBP7.38□□□□□ -1.23
LDB3-202ENST00000361373 DMXL1Q9Y485 3027 aa7.38□□□□□ -1.23
LDB3-202ENST00000361373 NF1P21359 2839 aa7.37□□□□□ -1.23
LDB3-202ENST00000361373 TENM3Q9P273 2699 aa7.34□□□□□ -1.23
LDB3-202ENST00000361373 H3BS24 57 aa7.31□□□□□ -1.24
LDB3-202ENST00000361373 TENM1Q9UKZ4 2725 aa7.28□□□□□ -1.24
LDB3-202ENST00000361373 XP32Q5T750 250 aa7.28□□□□□ -1.24
LDB3-202ENST00000361373 MXRA5Q9NR99 2828 aa7.28□□□□□ -1.24
LDB3-202ENST00000361373 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
LDB3-202ENST00000361373 FBN2P35556 2912 aa7.25□□□□□ -1.25
LDB3-202ENST00000361373 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
LDB3-202ENST00000361373 DNAH14Q0VDD8 3507 aa7.23□□□□□ -1.25
LDB3-202ENST00000361373 USP34Q70CQ2 3546 aa7.23□□□□□ -1.25
LDB3-202ENST00000361373 CFAP47Q6ZTR5 3102 aa7.22□□□□□ -1.25
LDB3-202ENST00000361373 A8MU10 97 aa7.21□□□□□ -1.26
LDB3-202ENST00000361373 TENM2Q9NT68 2774 aa7.18□□□□□ -1.26
LDB3-202ENST00000361373 A6NN06 94 aa7.14□□□□□ -1.27
LDB3-202ENST00000361373 TNP1P09430 55 aa7.13□□□□□ -1.27
LDB3-202ENST00000361373 SPTBN5Q9NRC6 3674 aaKnown RBP7.13□□□□□ -1.27
LDB3-202ENST00000361373 A0A1B0GVY2 172 aa7.12□□□□□ -1.27
LDB3-202ENST00000361373 KRTAP25-1Q3LHN0 102 aa7.11□□□□□ -1.27
LDB3-202ENST00000361373 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
LDB3-202ENST00000361373 KRTAP13-3Q3SY46 172 aa7.1□□□□□ -1.27
LDB3-202ENST00000361373 CELSR1Q9NYQ6 3014 aa7.08□□□□□ -1.28
LDB3-202ENST00000361373 LOC400499M0QZD8 3231 aa7.07□□□□□ -1.28
LDB3-202ENST00000361373 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
LDB3-202ENST00000361373 SPEGQ15772 3267 aa7.04□□□□□ -1.28
LDB3-202ENST00000361373 PDZD2O15018 2839 aa7.03□□□□□ -1.28
LDB3-202ENST00000361373 PKD1L1Q8TDX9 2849 aa7□□□□□ -1.29
LDB3-202ENST00000361373 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
LDB3-202ENST00000361373 TGP01266 2768 aa6.94□□□□□ -1.3
LDB3-202ENST00000361373 KRTAP10-10P60014 251 aa6.9□□□□□ -1.31
LDB3-202ENST00000361373 OTOGQ6ZRI0 2925 aa6.87□□□□□ -1.31
LDB3-202ENST00000361373 DCHS1Q96JQ0 3298 aa6.86□□□□□ -1.31
LDB3-202ENST00000361373 PRO2289Q9P1D8 64 aa6.85□□□□□ -1.31
LDB3-202ENST00000361373 H0YAA0 97 aa6.83□□□□□ -1.32
LDB3-202ENST00000361373 VWFP04275 2813 aa6.82□□□□□ -1.32
LDB3-202ENST00000361373 MYO15AQ9UKN7 3530 aa6.81□□□□□ -1.32
LDB3-202ENST00000361373 P0C880 135 aa6.76□□□□□ -1.33
LDB3-202ENST00000361373 FBN1P35555 2871 aaKnown RBP6.74□□□□□ -1.33
LDB3-202ENST00000361373 RELNP78509 3460 aa6.73□□□□□ -1.33
LDB3-202ENST00000361373 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
LDB3-202ENST00000361373 NDUFAF8A1L188 74 aa6.66□□□□□ -1.34
LDB3-202ENST00000361373 WDFY3Q8IZQ1 3526 aa6.62□□□□□ -1.35
LDB3-202ENST00000361373 SRRM2Q9UQ35 2752 aaKnown RBP6.57□□□□□ -1.36
LDB3-202ENST00000361373 NBPF19A0A087WUL8 3843 aa6.53□□□□□ -1.36
LDB3-202ENST00000361373 ZFHX3Q15911 3703 aa6.49□□□□□ -1.37
LDB3-202ENST00000361373 FBN3Q75N90 2809 aa6.49□□□□□ -1.37
LDB3-202ENST00000361373 ANK3Q12955 4377 aaKnown RBP6.49□□□□□ -1.37
LDB3-202ENST00000361373 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
LDB3-202ENST00000361373 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
LDB3-202ENST00000361373 LAMA5O15230 3695 aa6.46□□□□□ -1.38
LDB3-202ENST00000361373 KRTAP13-4Q3LI77 160 aa6.44□□□□□ -1.38
LDB3-202ENST00000361373 KRTAP12-2P59991 146 aa6.43□□□□□ -1.38
LDB3-202ENST00000361373 MEGF8Q7Z7M0 2845 aa6.43□□□□□ -1.38
LDB3-202ENST00000361373 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
LDB3-202ENST00000361373 ASPMQ8IZT6 3477 aa6.35□□□□□ -1.39
LDB3-202ENST00000361373 KRTAP10-4P60372 401 aaPredicted RBP6.34□□□□□ -1.39
LDB3-202ENST00000361373 COL7A1Q02388 2944 aa6.32□□□□□ -1.4
LDB3-202ENST00000361373 MUC3AQ02505 3323 aa6.31□□□□□ -1.4
LDB3-202ENST00000361373 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
LDB3-202ENST00000361373 ZFHX4Q86UP3 3567 aa6.27□□□□□ -1.41
LDB3-202ENST00000361373 TRRAPQ9Y4A5 3859 aa6.21□□□□□ -1.42
LDB3-202ENST00000361373 DMDP11532 3685 aa6.19□□□□□ -1.42
LDB3-202ENST00000361373 KRTAP4-5Q9BYR2 181 aa6.17□□□□□ -1.42
LDB3-202ENST00000361373 SMG1Q96Q15 3661 aaKnown RBP6.16□□□□□ -1.42
LDB3-202ENST00000361373 CSMD2Q7Z408 3487 aa6.15□□□□□ -1.43
LDB3-202ENST00000361373 CSMD1Q96PZ7 3565 aa6.13□□□□□ -1.43
LDB3-202ENST00000361373 KRTAP3-3Q9BYR6 98 aa6.1□□□□□ -1.43
LDB3-202ENST00000361373 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
LDB3-202ENST00000361373 HUWE1Q7Z6Z7 4374 aaKnown RBP6.08□□□□□ -1.44
LDB3-202ENST00000361373 KRTAP15-1Q3LI76 137 aa6.07□□□□□ -1.44
LDB3-202ENST00000361373 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
LDB3-202ENST00000361373 SPENQ96T58 3664 aaKnown RBP6□□□□□ -1.45
LDB3-202ENST00000361373 CUBNO60494 3623 aa5.98□□□□□ -1.45
LDB3-202ENST00000361373 KRTAP10-12P60413 245 aa5.95□□□□□ -1.46
LDB3-202ENST00000361373 SVEP1Q4LDE5 3571 aa5.95□□□□□ -1.46
LDB3-202ENST00000361373 BSNQ9UPA5 3926 aa5.92□□□□□ -1.46
LDB3-202ENST00000361373 KRTAP23-1A1A580 65 aa5.88□□□□□ -1.47
LDB3-202ENST00000361373 DNAH9Q9NYC9 4486 aa5.85□□□□□ -1.47
LDB3-202ENST00000361373 DNAH5Q8TE73 4624 aa5.82□□□□□ -1.48
LDB3-202ENST00000361373 KRTAP12-3P60328 96 aa5.76□□□□□ -1.49
LDB3-202ENST00000361373 DNAH10Q8IVF4 4471 aa5.75□□□□□ -1.49
LDB3-202ENST00000361373 DNAH11Q96DT5 4516 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms