RNA–Protein interactions for RNA: ENST00000361332.8

CTNND1-202, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-202ENST00000361332 STAB2Q8WWQ8 2551 aa4.62□□□□□ -1.67
CTNND1-202ENST00000361332 TEP1Q99973 2627 aaKnown RBP4.62□□□□□ -1.67
CTNND1-202ENST00000361332 RPS29P62273 56 aaKnown RBP4.61□□□□□ -1.67
CTNND1-202ENST00000361332 LRBAP50851 2863 aa4.61□□□□□ -1.67
CTNND1-202ENST00000361332 BOD1L1Q8NFC6 3051 aa4.61□□□□□ -1.67
CTNND1-202ENST00000361332 COL6A3P12111 3177 aa4.61□□□□□ -1.67
CTNND1-202ENST00000361332 ATMQ13315 3056 aa4.61□□□□□ -1.67
CTNND1-202ENST00000361332 COL6A5A8TX70 2615 aa4.6□□□□□ -1.67
CTNND1-202ENST00000361332 ASPMQ8IZT6 3477 aa4.59□□□□□ -1.68
CTNND1-202ENST00000361332 ITPR1Q14643 2758 aa4.59□□□□□ -1.68
CTNND1-202ENST00000361332 DMDP11532 3685 aa4.57□□□□□ -1.68
CTNND1-202ENST00000361332 BAHCC1Q9P281 2608 aa4.57□□□□□ -1.68
CTNND1-202ENST00000361332 FLNCQ14315 2725 aa4.57□□□□□ -1.68
CTNND1-202ENST00000361332 PP632Q6XCG6 107 aa4.57□□□□□ -1.68
CTNND1-202ENST00000361332 TACC2O95359 2948 aa4.56□□□□□ -1.68
CTNND1-202ENST00000361332 WDFY3Q8IZQ1 3526 aa4.55□□□□□ -1.68
CTNND1-202ENST00000361332 DMXL2Q8TDJ6 3036 aa4.53□□□□□ -1.68
CTNND1-202ENST00000361332 ASH1LQ9NR48 2969 aaKnown RBP4.53□□□□□ -1.68
CTNND1-202ENST00000361332 COL12A1Q99715 3063 aa4.52□□□□□ -1.69
CTNND1-202ENST00000361332 Q6ZRN7 208 aaPredicted RBP4.52□□□□□ -1.69
CTNND1-202ENST00000361332 KRTAP13-2Q52LG2 175 aa4.51□□□□□ -1.69
CTNND1-202ENST00000361332 ZZEF1O43149 2961 aa4.5□□□□□ -1.69
CTNND1-202ENST00000361332 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
CTNND1-202ENST00000361332 UTP20O75691 2785 aaKnown RBP4.49□□□□□ -1.69
CTNND1-202ENST00000361332 NSD1Q96L73 2696 aaPredicted RBP4.48□□□□□ -1.69
CTNND1-202ENST00000361332 H0YAA0 97 aa4.48□□□□□ -1.69
CTNND1-202ENST00000361332 APCP25054 2843 aa4.47□□□□□ -1.69
CTNND1-202ENST00000361332 ITPR2Q14571 2701 aa4.46□□□□□ -1.7
CTNND1-202ENST00000361332 CFAP47Q6ZTR5 3102 aa4.46□□□□□ -1.7
CTNND1-202ENST00000361332 HIVEP1P15822 2718 aa4.45□□□□□ -1.7
CTNND1-202ENST00000361332 REV3LO60673 3130 aa4.44□□□□□ -1.7
CTNND1-202ENST00000361332 HRNRQ86YZ3 2850 aaPredicted RBP4.43□□□□□ -1.7
CTNND1-202ENST00000361332 ZANQ9Y493 2812 aa4.43□□□□□ -1.7
CTNND1-202ENST00000361332 XP32Q5T750 250 aa4.42□□□□□ -1.7
CTNND1-202ENST00000361332 TNRC18O15417 2968 aaPredicted RBP4.41□□□□□ -1.7
CTNND1-202ENST00000361332 CELSR2Q9HCU4 2923 aa4.4□□□□□ -1.7
CTNND1-202ENST00000361332 NIPBLQ6KC79 2804 aaeCLIP4.4□□□□□ -1.71e-6■□□□□ 9
CTNND1-202ENST00000361332 ZFHX4Q86UP3 3567 aa4.39□□□□□ -1.71
CTNND1-202ENST00000361332 LOC400499M0QZD8 3231 aa4.38□□□□□ -1.71
CTNND1-202ENST00000361332 LAMA5O15230 3695 aa4.35□□□□□ -1.71
CTNND1-202ENST00000361332 DMXL1Q9Y485 3027 aa4.34□□□□□ -1.71
CTNND1-202ENST00000361332 DCHS2Q6V1P9 2916 aa4.34□□□□□ -1.71
CTNND1-202ENST00000361332 FBN2P35556 2912 aa4.33□□□□□ -1.72
CTNND1-202ENST00000361332 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
CTNND1-202ENST00000361332 KRTAP21-3Q3LHN1 58 aa4.31□□□□□ -1.72
CTNND1-202ENST00000361332 KMT2BQ9UMN6 2715 aaPredicted RBP4.31□□□□□ -1.72
CTNND1-202ENST00000361332 NF1P21359 2839 aa4.3□□□□□ -1.72
CTNND1-202ENST00000361332 KRTAP12-2P59991 146 aa4.28□□□□□ -1.73
CTNND1-202ENST00000361332 CRCT1Q9UGL9 99 aa4.27□□□□□ -1.73
CTNND1-202ENST00000361332 DCHS1Q96JQ0 3298 aa4.23□□□□□ -1.73
CTNND1-202ENST00000361332 MUC3AQ02505 3323 aa4.23□□□□□ -1.73
CTNND1-202ENST00000361332 MXRA5Q9NR99 2828 aa4.23□□□□□ -1.73
CTNND1-202ENST00000361332 KRTAP1-4P0C5Y4 121 aa4.22□□□□□ -1.73
CTNND1-202ENST00000361332 KRTAP15-1Q3LI76 137 aa4.21□□□□□ -1.73
CTNND1-202ENST00000361332 CRYBG3Q68DQ2 2970 aa4.21□□□□□ -1.74
CTNND1-202ENST00000361332 NBPF19A0A087WUL8 3843 aa4.19□□□□□ -1.74
CTNND1-202ENST00000361332 SPENQ96T58 3664 aaKnown RBP4.19□□□□□ -1.74
CTNND1-202ENST00000361332 RELNP78509 3460 aa4.18□□□□□ -1.74
CTNND1-202ENST00000361332 TENM4Q6N022 2769 aa4.18□□□□□ -1.74
CTNND1-202ENST00000361332 TENM3Q9P273 2699 aa4.16□□□□□ -1.74
CTNND1-202ENST00000361332 SMG1Q96Q15 3661 aaKnown RBP4.16□□□□□ -1.74
CTNND1-202ENST00000361332 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
CTNND1-202ENST00000361332 CSMD1Q96PZ7 3565 aa4.15□□□□□ -1.75
CTNND1-202ENST00000361332 CELSR1Q9NYQ6 3014 aa4.12□□□□□ -1.75
CTNND1-202ENST00000361332 ZFHX3Q15911 3703 aa4.1□□□□□ -1.75
CTNND1-202ENST00000361332 TGP01266 2768 aa4.1□□□□□ -1.75
CTNND1-202ENST00000361332 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
CTNND1-202ENST00000361332 SVEP1Q4LDE5 3571 aa4.09□□□□□ -1.75
CTNND1-202ENST00000361332 BSNQ9UPA5 3926 aa4.06□□□□□ -1.76
CTNND1-202ENST00000361332 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
CTNND1-202ENST00000361332 PDZD2O15018 2839 aa4.04□□□□□ -1.76
CTNND1-202ENST00000361332 TENM1Q9UKZ4 2725 aa4.03□□□□□ -1.76
CTNND1-202ENST00000361332 VPS13CQ709C8 3753 aa4.03□□□□□ -1.76
CTNND1-202ENST00000361332 CSMD2Q7Z408 3487 aa4.02□□□□□ -1.77
CTNND1-202ENST00000361332 INE1O15225 51 aa4□□□□□ -1.77
CTNND1-202ENST00000361332 VWFP04275 2813 aa3.98□□□□□ -1.77
CTNND1-202ENST00000361332 TENM2Q9NT68 2774 aa3.97□□□□□ -1.77
CTNND1-202ENST00000361332 KRTAP10-6P60371 365 aaPredicted RBP3.97□□□□□ -1.77
CTNND1-202ENST00000361332 KRTAP3-1Q9BYR8 98 aa3.93□□□□□ -1.78
CTNND1-202ENST00000361332 FBN1P35555 2871 aaKnown RBP3.91□□□□□ -1.78
CTNND1-202ENST00000361332 PKD1L1Q8TDX9 2849 aa3.9□□□□□ -1.78
CTNND1-202ENST00000361332 CUBNO60494 3623 aa3.87□□□□□ -1.79
CTNND1-202ENST00000361332 KRTAP10-12P60413 245 aa3.86□□□□□ -1.79
CTNND1-202ENST00000361332 OTOGQ6ZRI0 2925 aa3.85□□□□□ -1.79
CTNND1-202ENST00000361332 ANK3Q12955 4377 aaKnown RBP3.84□□□□□ -1.8
CTNND1-202ENST00000361332 KRTAP10-5P60370 271 aa3.82□□□□□ -1.8
CTNND1-202ENST00000361332 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
CTNND1-202ENST00000361332 FBN3Q75N90 2809 aa3.81□□□□□ -1.8
CTNND1-202ENST00000361332 SRRM2Q9UQ35 2752 aaKnown RBP3.81□□□□□ -1.8
CTNND1-202ENST00000361332 AKAP9Q99996 3911 aa3.78□□□□□ -1.8
CTNND1-202ENST00000361332 TRRAPQ9Y4A5 3859 aa3.75□□□□□ -1.81
CTNND1-202ENST00000361332 MEGF8Q7Z7M0 2845 aa3.74□□□□□ -1.81
CTNND1-202ENST00000361332 KRTAP8-1Q8IUC2 63 aa3.73□□□□□ -1.81
CTNND1-202ENST00000361332 ZNF469Q96JG9 3925 aaPredicted RBP3.71□□□□□ -1.82
CTNND1-202ENST00000361332 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
CTNND1-202ENST00000361332 KRTAP3-2Q9BYR7 98 aa3.69□□□□□ -1.82
CTNND1-202ENST00000361332 KRTAP3-3Q9BYR6 98 aa3.68□□□□□ -1.82
CTNND1-202ENST00000361332 COL7A1Q02388 2944 aa3.63□□□□□ -1.83
CTNND1-202ENST00000361332 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
CTNND1-202ENST00000361332 HUWE1Q7Z6Z7 4374 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms