RNA–Protein interactions for RNA: ENST00000361217.8

DENND4B-201, Transcript of DENN domain containing 4B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DENND4B, Length 5,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-201ENST00000361217 PLAC4Q8WY50 150 aa11.65□□□□□ -0.54
DENND4B-201ENST00000361217 COL6A3P12111 3177 aa11.64□□□□□ -0.55
DENND4B-201ENST00000361217 KRTAP25-1Q3LHN0 102 aa11.61□□□□□ -0.55
DENND4B-201ENST00000361217 ASH1LQ9NR48 2969 aaKnown RBP11.61□□□□□ -0.55
DENND4B-201ENST00000361217 A8MU10 97 aa11.55□□□□□ -0.56
DENND4B-201ENST00000361217 APCP25054 2843 aa11.55□□□□□ -0.56
DENND4B-201ENST00000361217 HIVEP1P15822 2718 aa11.53□□□□□ -0.56
DENND4B-201ENST00000361217 REV3LO60673 3130 aa11.5□□□□□ -0.57
DENND4B-201ENST00000361217 KMT2BQ9UMN6 2715 aaPredicted RBP11.49□□□□□ -0.57
DENND4B-201ENST00000361217 A8MUU9 505 aa11.48□□□□□ -0.57
DENND4B-201ENST00000361217 ZZEF1O43149 2961 aa11.47□□□□□ -0.57
DENND4B-201ENST00000361217 CFAP47Q6ZTR5 3102 aa11.44□□□□□ -0.58
DENND4B-201ENST00000361217 NIPBLQ6KC79 2804 aaeCLIP11.42□□□□□ -0.581e-5■■■■□ 22.3
DENND4B-201ENST00000361217 CELSR2Q9HCU4 2923 aa11.4□□□□□ -0.59
DENND4B-201ENST00000361217 EYSQ5T1H1 3165 aa11.38□□□□□ -0.59
DENND4B-201ENST00000361217 C20orf166-AS1Q96NR2 134 aa11.32□□□□□ -0.6
DENND4B-201ENST00000361217 CRYBG3Q68DQ2 2970 aa11.31□□□□□ -0.6
DENND4B-201ENST00000361217 ZANQ9Y493 2812 aa11.31□□□□□ -0.6
DENND4B-201ENST00000361217 SPTBN5Q9NRC6 3674 aaKnown RBP11.29□□□□□ -0.6
DENND4B-201ENST00000361217 KRTAP16-1A8MUX0 517 aa11.28□□□□□ -0.6
DENND4B-201ENST00000361217 TENM4Q6N022 2769 aa11.28□□□□□ -0.6
DENND4B-201ENST00000361217 DCHS2Q6V1P9 2916 aa11.25□□□□□ -0.61
DENND4B-201ENST00000361217 SPEGQ15772 3267 aa11.25□□□□□ -0.61
DENND4B-201ENST00000361217 USP34Q70CQ2 3546 aa11.21□□□□□ -0.61
DENND4B-201ENST00000361217 DMXL1Q9Y485 3027 aa11.18□□□□□ -0.62
DENND4B-201ENST00000361217 TNRC18O15417 2968 aaPredicted RBP11.16□□□□□ -0.62
DENND4B-201ENST00000361217 HRNRQ86YZ3 2850 aaPredicted RBP11.16□□□□□ -0.62
DENND4B-201ENST00000361217 KRTAP21-3Q3LHN1 58 aa11.12□□□□□ -0.63
DENND4B-201ENST00000361217 TNP1P09430 55 aa11.1□□□□□ -0.63
DENND4B-201ENST00000361217 KRTAP1-4P0C5Y4 121 aa11.09□□□□□ -0.63
DENND4B-201ENST00000361217 NDUFAF8A1L188 74 aa11.09□□□□□ -0.63
DENND4B-201ENST00000361217 LOC400499M0QZD8 3231 aa11.04□□□□□ -0.64
DENND4B-201ENST00000361217 FBN2P35556 2912 aa11.03□□□□□ -0.64
DENND4B-201ENST00000361217 XP32Q5T750 250 aa10.97□□□□□ -0.65
DENND4B-201ENST00000361217 NF1P21359 2839 aa10.96□□□□□ -0.65
DENND4B-201ENST00000361217 PP632Q6XCG6 107 aa10.92□□□□□ -0.66
DENND4B-201ENST00000361217 H0YAA0 97 aa10.9□□□□□ -0.66
DENND4B-201ENST00000361217 C10orf95Q9H7T3 257 aa10.87□□□□□ -0.67
DENND4B-201ENST00000361217 MYO15AQ9UKN7 3530 aa10.81□□□□□ -0.68
DENND4B-201ENST00000361217 TPRXLQ17RH7 258 aa10.75□□□□□ -0.69
DENND4B-201ENST00000361217 TENM3Q9P273 2699 aa10.74□□□□□ -0.69
DENND4B-201ENST00000361217 TENM1Q9UKZ4 2725 aa10.74□□□□□ -0.69
DENND4B-201ENST00000361217 CELSR1Q9NYQ6 3014 aa10.71□□□□□ -0.7
DENND4B-201ENST00000361217 MXRA5Q9NR99 2828 aa10.67□□□□□ -0.7
DENND4B-201ENST00000361217 P0C880 135 aa10.65□□□□□ -0.7
DENND4B-201ENST00000361217 KRTAP10-8P60410 259 aa10.63□□□□□ -0.71
DENND4B-201ENST00000361217 KRTAP13-3Q3SY46 172 aa10.61□□□□□ -0.71
DENND4B-201ENST00000361217 RELNP78509 3460 aa10.6□□□□□ -0.71
DENND4B-201ENST00000361217 TENM2Q9NT68 2774 aa10.6□□□□□ -0.71
DENND4B-201ENST00000361217 A0A1B0GVY2 172 aa10.59□□□□□ -0.71
DENND4B-201ENST00000361217 WDFY3Q8IZQ1 3526 aa10.55□□□□□ -0.72
DENND4B-201ENST00000361217 TGP01266 2768 aa10.5□□□□□ -0.73
DENND4B-201ENST00000361217 DCHS1Q96JQ0 3298 aa10.48□□□□□ -0.73
DENND4B-201ENST00000361217 PKD1L1Q8TDX9 2849 aa10.42□□□□□ -0.74
DENND4B-201ENST00000361217 KRTAP10-10P60014 251 aa10.37□□□□□ -0.75
DENND4B-201ENST00000361217 ASPMQ8IZT6 3477 aa10.34□□□□□ -0.75
DENND4B-201ENST00000361217 ZFHX4Q86UP3 3567 aa10.33□□□□□ -0.76
DENND4B-201ENST00000361217 PRO2289Q9P1D8 64 aa10.33□□□□□ -0.76
DENND4B-201ENST00000361217 LAMA5O15230 3695 aa10.29□□□□□ -0.76
DENND4B-201ENST00000361217 PDZD2O15018 2839 aa10.28□□□□□ -0.76
DENND4B-201ENST00000361217 VWFP04275 2813 aa10.27□□□□□ -0.76
DENND4B-201ENST00000361217 KRTAP12-2P59991 146 aa10.22□□□□□ -0.77
DENND4B-201ENST00000361217 FBN1P35555 2871 aaKnown RBP10.12□□□□□ -0.79
DENND4B-201ENST00000361217 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
DENND4B-201ENST00000361217 CSMD1Q96PZ7 3565 aa10.12□□□□□ -0.79
DENND4B-201ENST00000361217 KRTAP13-4Q3LI77 160 aa10.08□□□□□ -0.8
DENND4B-201ENST00000361217 KRTAP12-1P59990 96 aa10.05□□□□□ -0.8
DENND4B-201ENST00000361217 KRTAP3-1Q9BYR8 98 aa10.03□□□□□ -0.8
DENND4B-201ENST00000361217 OTOGQ6ZRI0 2925 aa10.01□□□□□ -0.81
DENND4B-201ENST00000361217 DMDP11532 3685 aa10□□□□□ -0.81
DENND4B-201ENST00000361217 SMG1Q96Q15 3661 aaKnown RBP9.98□□□□□ -0.81
DENND4B-201ENST00000361217 ZFHX3Q15911 3703 aa9.88□□□□□ -0.83
DENND4B-201ENST00000361217 MUC3AQ02505 3323 aa9.85□□□□□ -0.83
DENND4B-201ENST00000361217 ANK3Q12955 4377 aaKnown RBP9.82□□□□□ -0.84
DENND4B-201ENST00000361217 FBN3Q75N90 2809 aa9.8□□□□□ -0.84
DENND4B-201ENST00000361217 SVEP1Q4LDE5 3571 aa9.79□□□□□ -0.84
DENND4B-201ENST00000361217 SRRM2Q9UQ35 2752 aaKnown RBP9.79□□□□□ -0.84
DENND4B-201ENST00000361217 KRTAP10-6P60371 365 aaPredicted RBP9.76□□□□□ -0.85
DENND4B-201ENST00000361217 CSMD2Q7Z408 3487 aa9.67□□□□□ -0.86
DENND4B-201ENST00000361217 MEGF8Q7Z7M0 2845 aa9.65□□□□□ -0.87
DENND4B-201ENST00000361217 CUBNO60494 3623 aa9.64□□□□□ -0.87
DENND4B-201ENST00000361217 TRRAPQ9Y4A5 3859 aa9.58□□□□□ -0.88
DENND4B-201ENST00000361217 SPENQ96T58 3664 aaKnown RBP9.57□□□□□ -0.88
DENND4B-201ENST00000361217 KRTAP15-1Q3LI76 137 aa9.54□□□□□ -0.88
DENND4B-201ENST00000361217 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
DENND4B-201ENST00000361217 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
DENND4B-201ENST00000361217 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
DENND4B-201ENST00000361217 KRTAP3-3Q9BYR6 98 aa9.41□□□□□ -0.9
DENND4B-201ENST00000361217 BSNQ9UPA5 3926 aa9.32□□□□□ -0.92
DENND4B-201ENST00000361217 HUWE1Q7Z6Z7 4374 aaKnown RBP9.28□□□□□ -0.92
DENND4B-201ENST00000361217 KRTAP10-4P60372 401 aaPredicted RBP9.26□□□□□ -0.93
DENND4B-201ENST00000361217 INE1O15225 51 aa9.2□□□□□ -0.94
DENND4B-201ENST00000361217 KRTAP10-12P60413 245 aa9.14□□□□□ -0.95
DENND4B-201ENST00000361217 KRTAP4-5Q9BYR2 181 aa9.12□□□□□ -0.95
DENND4B-201ENST00000361217 VPS13CQ709C8 3753 aa9.1□□□□□ -0.95
DENND4B-201ENST00000361217 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
DENND4B-201ENST00000361217 ALMS1Q8TCU4 4167 aa9.04□□□□□ -0.96
DENND4B-201ENST00000361217 KRTAP12-3P60328 96 aa8.9□□□□□ -0.98
DENND4B-201ENST00000361217 LCE3AQ5TA76 89 aa8.83□□□□□ -1
DENND4B-201ENST00000361217 CSMD3Q7Z407 3707 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms