RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 LAMA1P25391 3075 aa6.94□□□□□ -1.3
NLRC3-202ENST00000359128 FRYQ5TBA9 3013 aa6.92□□□□□ -1.3
NLRC3-202ENST00000359128 REV3LO60673 3130 aa6.92□□□□□ -1.3
NLRC3-202ENST00000359128 KMT2BQ9UMN6 2715 aaPredicted RBP6.92□□□□□ -1.3
NLRC3-202ENST00000359128 FRYLO94915 3013 aa6.92□□□□□ -1.3
NLRC3-202ENST00000359128 NBEAL2Q6ZNJ1 2754 aa6.91□□□□□ -1.3
NLRC3-202ENST00000359128 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
NLRC3-202ENST00000359128 TACC2O95359 2948 aa6.91□□□□□ -1.3
NLRC3-202ENST00000359128 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
NLRC3-202ENST00000359128 DMBT1Q9UGM3 2413 aaPredicted RBP6.9□□□□□ -1.3
NLRC3-202ENST00000359128 TENM4Q6N022 2769 aa6.9□□□□□ -1.31
NLRC3-202ENST00000359128 ATMQ13315 3056 aa6.89□□□□□ -1.31
NLRC3-202ENST00000359128 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
NLRC3-202ENST00000359128 COL12A1Q99715 3063 aa6.88□□□□□ -1.31
NLRC3-202ENST00000359128 A6NN06 94 aa6.87□□□□□ -1.31
NLRC3-202ENST00000359128 PP632Q6XCG6 107 aa6.84□□□□□ -1.31
NLRC3-202ENST00000359128 EYSQ5T1H1 3165 aa6.84□□□□□ -1.32
NLRC3-202ENST00000359128 TNRC18O15417 2968 aaPredicted RBP6.82□□□□□ -1.32
NLRC3-202ENST00000359128 UTP20O75691 2785 aaKnown RBP6.8□□□□□ -1.32
NLRC3-202ENST00000359128 APCP25054 2843 aa6.8□□□□□ -1.32
NLRC3-202ENST00000359128 DMXL2Q8TDJ6 3036 aa6.8□□□□□ -1.32
NLRC3-202ENST00000359128 BOD1L1Q8NFC6 3051 aa6.78□□□□□ -1.32
NLRC3-202ENST00000359128 NDUFAF8A1L188 74 aa6.76□□□□□ -1.33
NLRC3-202ENST00000359128 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
NLRC3-202ENST00000359128 NIPBLQ6KC79 2804 aaeCLIP6.76□□□□□ -1.33
NLRC3-202ENST00000359128 USP34Q70CQ2 3546 aa6.76□□□□□ -1.33
NLRC3-202ENST00000359128 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
NLRC3-202ENST00000359128 SPEGQ15772 3267 aa6.75□□□□□ -1.33
NLRC3-202ENST00000359128 LRBAP50851 2863 aa6.7□□□□□ -1.34
NLRC3-202ENST00000359128 NBEAQ8NFP9 2946 aa6.69□□□□□ -1.34
NLRC3-202ENST00000359128 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
NLRC3-202ENST00000359128 KALRNO60229 2985 aa6.68□□□□□ -1.34
NLRC3-202ENST00000359128 ADGRG4Q8IZF6 3080 aa6.67□□□□□ -1.34
NLRC3-202ENST00000359128 MYO15AQ9UKN7 3530 aa6.66□□□□□ -1.34
NLRC3-202ENST00000359128 CRYBG3Q68DQ2 2970 aa6.65□□□□□ -1.35
NLRC3-202ENST00000359128 DMXL1Q9Y485 3027 aa6.6□□□□□ -1.35
NLRC3-202ENST00000359128 ZANQ9Y493 2812 aa6.6□□□□□ -1.35
NLRC3-202ENST00000359128 H0YAA0 97 aa6.59□□□□□ -1.35
NLRC3-202ENST00000359128 CELSR2Q9HCU4 2923 aa6.58□□□□□ -1.36
NLRC3-202ENST00000359128 P0C880 135 aa6.54□□□□□ -1.36
NLRC3-202ENST00000359128 DCHS2Q6V1P9 2916 aa6.53□□□□□ -1.36
NLRC3-202ENST00000359128 ASH1LQ9NR48 2969 aaKnown RBP6.48□□□□□ -1.37
NLRC3-202ENST00000359128 WDFY3Q8IZQ1 3526 aa6.46□□□□□ -1.37
NLRC3-202ENST00000359128 ASPMQ8IZT6 3477 aa6.45□□□□□ -1.38
NLRC3-202ENST00000359128 LOC400499M0QZD8 3231 aa6.45□□□□□ -1.38
NLRC3-202ENST00000359128 NF1P21359 2839 aa6.45□□□□□ -1.38
NLRC3-202ENST00000359128 TENM3Q9P273 2699 aa6.41□□□□□ -1.38
NLRC3-202ENST00000359128 DCHS1Q96JQ0 3298 aa6.39□□□□□ -1.39
NLRC3-202ENST00000359128 HRNRQ86YZ3 2850 aaPredicted RBP6.39□□□□□ -1.39
NLRC3-202ENST00000359128 MXRA5Q9NR99 2828 aa6.38□□□□□ -1.39
NLRC3-202ENST00000359128 TENM1Q9UKZ4 2725 aa6.34□□□□□ -1.39
NLRC3-202ENST00000359128 RELNP78509 3460 aa6.33□□□□□ -1.4
NLRC3-202ENST00000359128 FBN2P35556 2912 aa6.31□□□□□ -1.4
NLRC3-202ENST00000359128 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
NLRC3-202ENST00000359128 TENM2Q9NT68 2774 aa6.29□□□□□ -1.4
NLRC3-202ENST00000359128 NBPF19A0A087WUL8 3843 aa6.28□□□□□ -1.4
NLRC3-202ENST00000359128 LAMA5O15230 3695 aa6.28□□□□□ -1.4
NLRC3-202ENST00000359128 KRTAP13-4Q3LI77 160 aa6.27□□□□□ -1.41
NLRC3-202ENST00000359128 ZFHX4Q86UP3 3567 aa6.25□□□□□ -1.41
NLRC3-202ENST00000359128 DMDP11532 3685 aa6.25□□□□□ -1.41
NLRC3-202ENST00000359128 PKD1L1Q8TDX9 2849 aa6.2□□□□□ -1.42
NLRC3-202ENST00000359128 CSMD1Q96PZ7 3565 aa6.19□□□□□ -1.42
NLRC3-202ENST00000359128 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
NLRC3-202ENST00000359128 KRTAP12-1P59990 96 aa6.14□□□□□ -1.43
NLRC3-202ENST00000359128 PDZD2O15018 2839 aa6.14□□□□□ -1.43
NLRC3-202ENST00000359128 CELSR1Q9NYQ6 3014 aa6.1□□□□□ -1.43
NLRC3-202ENST00000359128 OTOGQ6ZRI0 2925 aa6.07□□□□□ -1.44
NLRC3-202ENST00000359128 MUC3AQ02505 3323 aa6.04□□□□□ -1.44
NLRC3-202ENST00000359128 KRTAP3-1Q9BYR8 98 aa6.03□□□□□ -1.44
NLRC3-202ENST00000359128 TGP01266 2768 aa6.02□□□□□ -1.44
NLRC3-202ENST00000359128 VWFP04275 2813 aa6.02□□□□□ -1.45
NLRC3-202ENST00000359128 SMG1Q96Q15 3661 aaKnown RBP5.98□□□□□ -1.45
NLRC3-202ENST00000359128 FBN1P35555 2871 aaKnown RBP5.97□□□□□ -1.45
NLRC3-202ENST00000359128 CRCT1Q9UGL9 99 aa5.96□□□□□ -1.46
NLRC3-202ENST00000359128 MT1HL1P0DM35 61 aa5.95□□□□□ -1.46
NLRC3-202ENST00000359128 ZFHX3Q15911 3703 aa5.95□□□□□ -1.46
NLRC3-202ENST00000359128 KRTAP10-12P60413 245 aa5.9□□□□□ -1.47
NLRC3-202ENST00000359128 ANK3Q12955 4377 aaKnown RBP5.88□□□□□ -1.47
NLRC3-202ENST00000359128 SVEP1Q4LDE5 3571 aa5.87□□□□□ -1.47
NLRC3-202ENST00000359128 CSMD2Q7Z408 3487 aa5.87□□□□□ -1.47
NLRC3-202ENST00000359128 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
NLRC3-202ENST00000359128 SRRM2Q9UQ35 2752 aaKnown RBP5.85□□□□□ -1.47
NLRC3-202ENST00000359128 SPENQ96T58 3664 aaKnown RBP5.85□□□□□ -1.47
NLRC3-202ENST00000359128 KRTAP10-6P60371 365 aaPredicted RBP5.84□□□□□ -1.47
NLRC3-202ENST00000359128 ALMS1Q8TCU4 4167 aa5.84□□□□□ -1.47
NLRC3-202ENST00000359128 CUBNO60494 3623 aa5.8□□□□□ -1.48
NLRC3-202ENST00000359128 BSNQ9UPA5 3926 aa5.78□□□□□ -1.48
NLRC3-202ENST00000359128 FBN3Q75N90 2809 aa5.71□□□□□ -1.5
NLRC3-202ENST00000359128 HUWE1Q7Z6Z7 4374 aaKnown RBP5.67□□□□□ -1.5
NLRC3-202ENST00000359128 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
NLRC3-202ENST00000359128 TRRAPQ9Y4A5 3859 aa5.65□□□□□ -1.5
NLRC3-202ENST00000359128 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.51
NLRC3-202ENST00000359128 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
NLRC3-202ENST00000359128 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
NLRC3-202ENST00000359128 KRTAP8-1Q8IUC2 63 aa5.6□□□□□ -1.51
NLRC3-202ENST00000359128 INE1O15225 51 aa5.59□□□□□ -1.51
NLRC3-202ENST00000359128 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
NLRC3-202ENST00000359128 MEGF8Q7Z7M0 2845 aa5.54□□□□□ -1.52
NLRC3-202ENST00000359128 VPS13CQ709C8 3753 aa5.52□□□□□ -1.53
NLRC3-202ENST00000359128 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms