RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 KRTAP29-1A8MX34 341 aaPredicted RBP8.83□□□□□ -1
CTSA-202ENST00000354880 A0A1B0GVX0 72 aa8.81□□□□□ -1
CTSA-202ENST00000354880 IGHV6-1A0A0B4J1U7 121 aa8.8□□□□□ -1
CTSA-202ENST00000354880 FAM236AA0A1B0GUQ0 79 aa8.8□□□□□ -1
CTSA-202ENST00000354880 FAM236BA0A1B0GV22 79 aa8.8□□□□□ -1
CTSA-202ENST00000354880 SCGB1A1P11684 91 aa8.78□□□□□ -1
CTSA-202ENST00000354880 HCG22E2RYF7 251 aa8.77□□□□□ -1.01
CTSA-202ENST00000354880 RETNLBQ9BQ08 111 aa8.77□□□□□ -1.01
CTSA-202ENST00000354880 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
CTSA-202ENST00000354880 MMP24-AS1A0A0U1RRL7 71 aa8.74□□□□□ -1.01
CTSA-202ENST00000354880 WFDC13Q8IUB5 93 aa8.73□□□□□ -1.01
CTSA-202ENST00000354880 NOTCH2NLQ7Z3S9 236 aa8.73□□□□□ -1.01
CTSA-202ENST00000354880 J3QL48 77 aa8.72□□□□□ -1.01
CTSA-202ENST00000354880 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
CTSA-202ENST00000354880 C8orf87E5RJ46 101 aa8.71□□□□□ -1.01
CTSA-202ENST00000354880 hDV103S1A0JD37 113 aa8.7□□□□□ -1.02
CTSA-202ENST00000354880 LINC00313P59037 77 aa8.7□□□□□ -1.02
CTSA-202ENST00000354880 ATOX1O00244 68 aa8.68□□□□□ -1.02
CTSA-202ENST00000354880 FP248Q71RG6 208 aaPredicted RBP8.68□□□□□ -1.02
CTSA-202ENST00000354880 PCLOQ9Y6V0 5065 aa8.65□□□□□ -1.02
CTSA-202ENST00000354880 TMEM254Q8TBM7 123 aa8.65□□□□□ -1.02
CTSA-202ENST00000354880 MRPL34Q9BQ48 92 aaKnown RBP8.64□□□□□ -1.03
CTSA-202ENST00000354880 ANAPC13Q9BS18 74 aa8.61□□□□□ -1.03
CTSA-202ENST00000354880 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
CTSA-202ENST00000354880 SMIM20Q8N5G0 67 aa8.61□□□□□ -1.03
CTSA-202ENST00000354880 C9orf92A6NGG3 77 aa8.6□□□□□ -1.03
CTSA-202ENST00000354880 KRTAP16-1A8MUX0 517 aa8.6□□□□□ -1.03
CTSA-202ENST00000354880 PRR4Q16378 134 aa8.59□□□□□ -1.03
CTSA-202ENST00000354880 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
CTSA-202ENST00000354880 NDUFS5O43920 106 aa8.57□□□□□ -1.04
CTSA-202ENST00000354880 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
CTSA-202ENST00000354880 SERP2Q8N6R1 65 aa8.57□□□□□ -1.04
CTSA-202ENST00000354880 Q8N9P0 234 aaPredicted RBP8.56□□□□□ -1.04
CTSA-202ENST00000354880 TP53AIP1Q9HCN2 124 aa8.54□□□□□ -1.04
CTSA-202ENST00000354880 PCP4P48539 62 aa8.52□□□□□ -1.04
CTSA-202ENST00000354880 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.04
CTSA-202ENST00000354880 UQCRQO14949 82 aa8.51□□□□□ -1.05
CTSA-202ENST00000354880 COX7CP15954 63 aa8.51□□□□□ -1.05
CTSA-202ENST00000354880 HERC1Q15751 4861 aa8.5□□□□□ -1.05
CTSA-202ENST00000354880 C20orf166-AS1Q96NR2 134 aa8.49□□□□□ -1.05
CTSA-202ENST00000354880 TPRXLQ17RH7 258 aa8.48□□□□□ -1.05
CTSA-202ENST00000354880 A8MUU9 505 aa8.47□□□□□ -1.05
CTSA-202ENST00000354880 LPAP08519 4548 aa8.47□□□□□ -1.05
CTSA-202ENST00000354880 C5orf47Q569G3 176 aa8.46□□□□□ -1.06
CTSA-202ENST00000354880 TRAV22A0A0B4J277 110 aa8.45□□□□□ -1.06
CTSA-202ENST00000354880 XP32Q5T750 250 aa8.44□□□□□ -1.06
CTSA-202ENST00000354880 Q75L30 129 aa8.44□□□□□ -1.06
CTSA-202ENST00000354880 H0Y9P7 68 aa8.43□□□□□ -1.06
CTSA-202ENST00000354880 Q5W150 140 aa8.43□□□□□ -1.06
CTSA-202ENST00000354880 CCDC179H3BU77 68 aa8.42□□□□□ -1.06
CTSA-202ENST00000354880 MP68P56378 58 aa8.42□□□□□ -1.06
CTSA-202ENST00000354880 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
CTSA-202ENST00000354880 LRP2P98164 4655 aa8.4□□□□□ -1.06
CTSA-202ENST00000354880 ZCCHC13Q8WW36 166 aaKnown RBP8.39□□□□□ -1.07
CTSA-202ENST00000354880 RPL37P61927 97 aaKnown RBP8.38□□□□□ -1.07
CTSA-202ENST00000354880 LINC00208Q96KT6 92 aa8.37□□□□□ -1.07
CTSA-202ENST00000354880 A0A0U1RQV1 116 aa8.36□□□□□ -1.07
CTSA-202ENST00000354880 H3BPC8 53 aa8.36□□□□□ -1.07
CTSA-202ENST00000354880 SNURFQ9Y675 71 aa8.36□□□□□ -1.07
CTSA-202ENST00000354880 KLKP1Q107X0 134 aa8.35□□□□□ -1.07
CTSA-202ENST00000354880 HMCN2Q8NDA2 5059 aa8.34□□□□□ -1.07
CTSA-202ENST00000354880 C1orf64Q8NEQ6 169 aa8.34□□□□□ -1.07
CTSA-202ENST00000354880 ATP11AUNQ6ZP68 121 aa8.33□□□□□ -1.08
CTSA-202ENST00000354880 LOC101927531A0A1B0GV80 90 aa8.3□□□□□ -1.08
CTSA-202ENST00000354880 CYSTM1Q9H1C7 97 aa8.29□□□□□ -1.08
CTSA-202ENST00000354880 IGKV2-30P06310 120 aa8.26□□□□□ -1.09
CTSA-202ENST00000354880 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
CTSA-202ENST00000354880 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
CTSA-202ENST00000354880 NDUFC1O43677 76 aa8.24□□□□□ -1.09
CTSA-202ENST00000354880 PCOTHQ58A44 107 aa8.23□□□□□ -1.09
CTSA-202ENST00000354880 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
CTSA-202ENST00000354880 H7BZZ5 65 aa8.22□□□□□ -1.09
CTSA-202ENST00000354880 SPINK7P58062 85 aa8.19□□□□□ -1.1
CTSA-202ENST00000354880 SEC61BP60468 96 aaKnown RBP8.19□□□□□ -1.1
CTSA-202ENST00000354880 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
CTSA-202ENST00000354880 TMEM258P61165 79 aa8.12□□□□□ -1.11
CTSA-202ENST00000354880 HRES1P13985 223 aa8.11□□□□□ -1.11
CTSA-202ENST00000354880 SPANXA2-OT1Q8N9U9 137 aa8.1□□□□□ -1.11
CTSA-202ENST00000354880 FAM236DA0A1B0GTK5 79 aa8.06□□□□□ -1.12
CTSA-202ENST00000354880 FAM236CP0DP71 79 aa8.06□□□□□ -1.12
CTSA-202ENST00000354880 C4orf26Q17RF5 130 aa8.05□□□□□ -1.12
CTSA-202ENST00000354880 ATP5EP56381 51 aaPredicted RBP8.03□□□□□ -1.12
CTSA-202ENST00000354880 KRTAP4-1Q9BYQ7 146 aa8.01□□□□□ -1.13
CTSA-202ENST00000354880 MUC2Q02817 5179 aa7.97□□□□□ -1.13
CTSA-202ENST00000354880 DMAC1Q96GE9 116 aa7.97□□□□□ -1.13
CTSA-202ENST00000354880 COX6B2Q6YFQ2 88 aa7.96□□□□□ -1.14
CTSA-202ENST00000354880 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
CTSA-202ENST00000354880 UBR4Q5T4S7 5183 aa7.94□□□□□ -1.14
CTSA-202ENST00000354880 A8MUN3 132 aa7.93□□□□□ -1.14
CTSA-202ENST00000354880 KRTAP3-1Q9BYR8 98 aa7.92□□□□□ -1.14
CTSA-202ENST00000354880 RBM12B-AS1Q9P1G2 102 aa7.92□□□□□ -1.14
CTSA-202ENST00000354880 ACYP2P14621 99 aa7.92□□□□□ -1.14
CTSA-202ENST00000354880 RNF213Q63HN8 5207 aa7.87□□□□□ -1.15
CTSA-202ENST00000354880 SERP1Q9Y6X1 66 aa7.86□□□□□ -1.15
CTSA-202ENST00000354880 COA5Q86WW8 74 aa7.85□□□□□ -1.15
CTSA-202ENST00000354880 H1FX-AS1Q4G0G2 97 aa7.8□□□□□ -1.16
CTSA-202ENST00000354880 RPS28P62857 69 aaKnown RBP7.79□□□□□ -1.16
CTSA-202ENST00000354880 CHKB-CPT1BH3BT56 60 aa7.78□□□□□ -1.16
CTSA-202ENST00000354880 KRTAP19-2Q3LHN2 52 aa7.77□□□□□ -1.17
CTSA-202ENST00000354880 SVIPQ8NHG7 77 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms