RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 K7EQZ3 153 aa9.24□□□□□ -0.93
CEACAM1-202ENST00000344391 HIST1H4AP62805 103 aaKnown RBP9.23□□□□□ -0.93
CEACAM1-202ENST00000344391 PRR15Q8IV56 129 aa9.21□□□□□ -0.93
CEACAM1-202ENST00000344391 A0A087WVE0 104 aa9.2□□□□□ -0.94
CEACAM1-202ENST00000344391 NDUFB1O75438 58 aa9.2□□□□□ -0.94
CEACAM1-202ENST00000344391 A0A1B0GVX0 72 aa9.18□□□□□ -0.94
CEACAM1-202ENST00000344391 RETNLBQ9BQ08 111 aa9.18□□□□□ -0.94
CEACAM1-202ENST00000344391 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
CEACAM1-202ENST00000344391 J3QL48 77 aa9.16□□□□□ -0.94
CEACAM1-202ENST00000344391 IGHV6-1A0A0B4J1U7 121 aa9.15□□□□□ -0.94
CEACAM1-202ENST00000344391 C8orf17Q9NRJ1 99 aa9.12□□□□□ -0.95
CEACAM1-202ENST00000344391 MMP24-AS1A0A0U1RRL7 71 aa9.11□□□□□ -0.95
CEACAM1-202ENST00000344391 NOTCH2NLQ7Z3S9 236 aa9.11□□□□□ -0.95
CEACAM1-202ENST00000344391 HCG22E2RYF7 251 aa9.1□□□□□ -0.95
CEACAM1-202ENST00000344391 FAM236AA0A1B0GUQ0 79 aa9.09□□□□□ -0.95
CEACAM1-202ENST00000344391 FAM236BA0A1B0GV22 79 aa9.09□□□□□ -0.95
CEACAM1-202ENST00000344391 C8orf87E5RJ46 101 aa9.09□□□□□ -0.95
CEACAM1-202ENST00000344391 FP248Q71RG6 208 aaPredicted RBP9.09□□□□□ -0.95
CEACAM1-202ENST00000344391 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
CEACAM1-202ENST00000344391 LINC00313P59037 77 aa9.07□□□□□ -0.96
CEACAM1-202ENST00000344391 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
CEACAM1-202ENST00000344391 CASC2Q6XLA1 102 aa9.05□□□□□ -0.96
CEACAM1-202ENST00000344391 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
CEACAM1-202ENST00000344391 ANAPC13Q9BS18 74 aa9.02□□□□□ -0.96
CEACAM1-202ENST00000344391 IGLV7-46A0A075B6I9 117 aa9.02□□□□□ -0.97
CEACAM1-202ENST00000344391 TMEM254Q8TBM7 123 aa9.02□□□□□ -0.97
CEACAM1-202ENST00000344391 KRTAP16-1A8MUX0 517 aa9□□□□□ -0.97
CEACAM1-202ENST00000344391 PRR4Q16378 134 aa9□□□□□ -0.97
CEACAM1-202ENST00000344391 MRPL34Q9BQ48 92 aaKnown RBP9□□□□□ -0.97
CEACAM1-202ENST00000344391 C9orf92A6NGG3 77 aa8.98□□□□□ -0.97
CEACAM1-202ENST00000344391 ATOX1O00244 68 aa8.97□□□□□ -0.97
CEACAM1-202ENST00000344391 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.98
CEACAM1-202ENST00000344391 HERC1Q15751 4861 aa8.94□□□□□ -0.98
CEACAM1-202ENST00000344391 KRTAP13-3Q3SY46 172 aa8.94□□□□□ -0.98
CEACAM1-202ENST00000344391 Q8N9P0 234 aaPredicted RBP8.94□□□□□ -0.98
CEACAM1-202ENST00000344391 OCR1Q9BZK8 76 aa8.93□□□□□ -0.98
CEACAM1-202ENST00000344391 NDUFS5O43920 106 aa8.9□□□□□ -0.99
CEACAM1-202ENST00000344391 TPRXLQ17RH7 258 aa8.89□□□□□ -0.99
CEACAM1-202ENST00000344391 TRAV7A0A075B6U4 112 aa8.87□□□□□ -0.99
CEACAM1-202ENST00000344391 C20orf166-AS1Q96NR2 134 aa8.87□□□□□ -0.99
CEACAM1-202ENST00000344391 TP53AIP1Q9HCN2 124 aa8.87□□□□□ -0.99
CEACAM1-202ENST00000344391 A8MUU9 505 aa8.87□□□□□ -0.99
CEACAM1-202ENST00000344391 LPAP08519 4548 aa8.86□□□□□ -0.99
CEACAM1-202ENST00000344391 SERP2Q8N6R1 65 aa8.86□□□□□ -0.99
CEACAM1-202ENST00000344391 UQCRQO14949 82 aa8.84□□□□□ -0.99
CEACAM1-202ENST00000344391 XP32Q5T750 250 aa8.84□□□□□ -0.99
CEACAM1-202ENST00000344391 HMCN2Q8NDA2 5059 aa8.83□□□□□ -1
CEACAM1-202ENST00000344391 Q75L30 129 aa8.82□□□□□ -1
CEACAM1-202ENST00000344391 RPS28P62857 69 aaKnown RBP8.81□□□□□ -1
CEACAM1-202ENST00000344391 LRP2P98164 4655 aa8.8□□□□□ -1
CEACAM1-202ENST00000344391 COX7CP15954 63 aa8.8□□□□□ -1
CEACAM1-202ENST00000344391 Q5W150 140 aa8.8□□□□□ -1
CEACAM1-202ENST00000344391 RPL37P61927 97 aaKnown RBP8.77□□□□□ -1.01
CEACAM1-202ENST00000344391 TRAV22A0A0B4J277 110 aa8.76□□□□□ -1.01
CEACAM1-202ENST00000344391 ZCCHC13Q8WW36 166 aaKnown RBP8.76□□□□□ -1.01
CEACAM1-202ENST00000344391 H0Y9P7 68 aa8.75□□□□□ -1.01
CEACAM1-202ENST00000344391 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
CEACAM1-202ENST00000344391 MP68P56378 58 aa8.72□□□□□ -1.01
CEACAM1-202ENST00000344391 C20orf197Q8N268 126 aa8.7□□□□□ -1.02
CEACAM1-202ENST00000344391 ATP11AUNQ6ZP68 121 aa8.69□□□□□ -1.02
CEACAM1-202ENST00000344391 H3BPC8 53 aa8.69□□□□□ -1.02
CEACAM1-202ENST00000344391 LINC00208Q96KT6 92 aa8.69□□□□□ -1.02
CEACAM1-202ENST00000344391 A0A0U1RQV1 116 aa8.68□□□□□ -1.02
CEACAM1-202ENST00000344391 C1orf64Q8NEQ6 169 aa8.66□□□□□ -1.02
CEACAM1-202ENST00000344391 SNURFQ9Y675 71 aa8.65□□□□□ -1.02
CEACAM1-202ENST00000344391 KLKP1Q107X0 134 aa8.65□□□□□ -1.03
CEACAM1-202ENST00000344391 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
CEACAM1-202ENST00000344391 MUC17Q685J3 4493 aa8.63□□□□□ -1.03
CEACAM1-202ENST00000344391 IGKV2-30P06310 120 aa8.62□□□□□ -1.03
CEACAM1-202ENST00000344391 PCOTHQ58A44 107 aa8.62□□□□□ -1.03
CEACAM1-202ENST00000344391 IGKV2D-30A0A075B6S6 120 aa8.59□□□□□ -1.03
CEACAM1-202ENST00000344391 CYP4F30PQ9H0H9 118 aa8.59□□□□□ -1.03
CEACAM1-202ENST00000344391 SEC61BP60468 96 aaKnown RBP8.58□□□□□ -1.04
CEACAM1-202ENST00000344391 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
CEACAM1-202ENST00000344391 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
CEACAM1-202ENST00000344391 SPINK7P58062 85 aa8.54□□□□□ -1.04
CEACAM1-202ENST00000344391 NDUFC1O43677 76 aa8.52□□□□□ -1.05
CEACAM1-202ENST00000344391 TMEM258P61165 79 aa8.52□□□□□ -1.05
CEACAM1-202ENST00000344391 PRO0628Q9UI54 55 aa8.52□□□□□ -1.05
CEACAM1-202ENST00000344391 H7BZZ5 65 aa8.51□□□□□ -1.05
CEACAM1-202ENST00000344391 HRES1P13985 223 aa8.45□□□□□ -1.06
CEACAM1-202ENST00000344391 SEC61GP60059 68 aa8.45□□□□□ -1.06
CEACAM1-202ENST00000344391 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
CEACAM1-202ENST00000344391 V9GYY9 64 aa8.42□□□□□ -1.06
CEACAM1-202ENST00000344391 UBR4Q5T4S7 5183 aa8.42□□□□□ -1.06
CEACAM1-202ENST00000344391 SPANXA2-OT1Q8N9U9 137 aa8.4□□□□□ -1.07
CEACAM1-202ENST00000344391 C4orf26Q17RF5 130 aa8.38□□□□□ -1.07
CEACAM1-202ENST00000344391 RNF213Q63HN8 5207 aa8.36□□□□□ -1.07
CEACAM1-202ENST00000344391 MUC2Q02817 5179 aa8.35□□□□□ -1.07
CEACAM1-202ENST00000344391 MPLKIPQ8TAP9 179 aa8.34□□□□□ -1.07
CEACAM1-202ENST00000344391 FAM236DA0A1B0GTK5 79 aa8.32□□□□□ -1.08
CEACAM1-202ENST00000344391 FAM236CP0DP71 79 aa8.32□□□□□ -1.08
CEACAM1-202ENST00000344391 COX6B2Q6YFQ2 88 aa8.31□□□□□ -1.08
CEACAM1-202ENST00000344391 ATP5EP56381 51 aaPredicted RBP8.29□□□□□ -1.08
CEACAM1-202ENST00000344391 DMAC1Q96GE9 116 aa8.29□□□□□ -1.08
CEACAM1-202ENST00000344391 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
CEACAM1-202ENST00000344391 RBM12B-AS1Q9P1G2 102 aa8.27□□□□□ -1.09
CEACAM1-202ENST00000344391 SERP1Q9Y6X1 66 aa8.27□□□□□ -1.09
CEACAM1-202ENST00000344391 A8MUN3 132 aa8.25□□□□□ -1.09
CEACAM1-202ENST00000344391 SMIM26A0A096LP01 95 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms