RNA–Protein interactions for RNA: ENST00000339490.7

PHKA1-201, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 6,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-201ENST00000339490 ASH1LQ9NR48 2969 aaKnown RBP9.53□□□□□ -0.88
PHKA1-201ENST00000339490 COL6A3P12111 3177 aa9.51□□□□□ -0.89
PHKA1-201ENST00000339490 COL12A1Q99715 3063 aa9.5□□□□□ -0.89
PHKA1-201ENST00000339490 KRTAP16-1A8MUX0 517 aa9.5□□□□□ -0.89
PHKA1-201ENST00000339490 NBEAQ8NFP9 2946 aa9.5□□□□□ -0.89
PHKA1-201ENST00000339490 HIVEP1P15822 2718 aa9.49□□□□□ -0.89
PHKA1-201ENST00000339490 ADGRG4Q8IZF6 3080 aa9.47□□□□□ -0.89
PHKA1-201ENST00000339490 BOD1L1Q8NFC6 3051 aa9.47□□□□□ -0.89
PHKA1-201ENST00000339490 FLNCQ14315 2725 aa9.44□□□□□ -0.9
PHKA1-201ENST00000339490 REV3LO60673 3130 aa9.44□□□□□ -0.9
PHKA1-201ENST00000339490 FRYLO94915 3013 aa9.43□□□□□ -0.9
PHKA1-201ENST00000339490 NDUFAF8A1L188 74 aa9.43□□□□□ -0.9
PHKA1-201ENST00000339490 KMT2BQ9UMN6 2715 aaPredicted RBP9.42□□□□□ -0.9
PHKA1-201ENST00000339490 CFAP47Q6ZTR5 3102 aa9.4□□□□□ -0.91
PHKA1-201ENST00000339490 CRYBG3Q68DQ2 2970 aa9.39□□□□□ -0.91
PHKA1-201ENST00000339490 TNP1P09430 55 aa9.38□□□□□ -0.91
PHKA1-201ENST00000339490 C10orf95Q9H7T3 257 aa9.3□□□□□ -0.92
PHKA1-201ENST00000339490 KRTAP1-4P0C5Y4 121 aa9.3□□□□□ -0.92
PHKA1-201ENST00000339490 CELSR2Q9HCU4 2923 aa9.28□□□□□ -0.92
PHKA1-201ENST00000339490 ZZEF1O43149 2961 aa9.27□□□□□ -0.93
PHKA1-201ENST00000339490 XP32Q5T750 250 aa9.26□□□□□ -0.93
PHKA1-201ENST00000339490 TENM4Q6N022 2769 aa9.23□□□□□ -0.93
PHKA1-201ENST00000339490 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
PHKA1-201ENST00000339490 NIPBLQ6KC79 2804 aaeCLIP9.2□□□□□ -0.94
PHKA1-201ENST00000339490 KRTAP21-3Q3LHN1 58 aa9.2□□□□□ -0.94
PHKA1-201ENST00000339490 EYSQ5T1H1 3165 aa9.19□□□□□ -0.94
PHKA1-201ENST00000339490 SPEGQ15772 3267 aa9.15□□□□□ -0.94
PHKA1-201ENST00000339490 DCHS2Q6V1P9 2916 aa9.15□□□□□ -0.94
PHKA1-201ENST00000339490 KRTAP10-8P60410 259 aa9.15□□□□□ -0.94
PHKA1-201ENST00000339490 H0YAA0 97 aa9.15□□□□□ -0.95
PHKA1-201ENST00000339490 USP34Q70CQ2 3546 aa9.1□□□□□ -0.95
PHKA1-201ENST00000339490 SPTBN5Q9NRC6 3674 aaKnown RBP9.09□□□□□ -0.95
PHKA1-201ENST00000339490 ZANQ9Y493 2812 aa9.06□□□□□ -0.96
PHKA1-201ENST00000339490 PP632Q6XCG6 107 aa9.05□□□□□ -0.96
PHKA1-201ENST00000339490 TPRXLQ17RH7 258 aa8.99□□□□□ -0.97
PHKA1-201ENST00000339490 TNRC18O15417 2968 aaPredicted RBP8.98□□□□□ -0.97
PHKA1-201ENST00000339490 HRNRQ86YZ3 2850 aaPredicted RBP8.95□□□□□ -0.98
PHKA1-201ENST00000339490 P0C880 135 aa8.94□□□□□ -0.98
PHKA1-201ENST00000339490 DMXL1Q9Y485 3027 aa8.92□□□□□ -0.98
PHKA1-201ENST00000339490 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
PHKA1-201ENST00000339490 FBN2P35556 2912 aa8.91□□□□□ -0.98
PHKA1-201ENST00000339490 KRTAP13-3Q3SY46 172 aa8.91□□□□□ -0.98
PHKA1-201ENST00000339490 TENM1Q9UKZ4 2725 aa8.85□□□□□ -0.99
PHKA1-201ENST00000339490 NF1P21359 2839 aa8.85□□□□□ -0.99
PHKA1-201ENST00000339490 LOC400499M0QZD8 3231 aa8.84□□□□□ -0.99
PHKA1-201ENST00000339490 TENM3Q9P273 2699 aa8.79□□□□□ -1
PHKA1-201ENST00000339490 TENM2Q9NT68 2774 aa8.78□□□□□ -1
PHKA1-201ENST00000339490 CELSR1Q9NYQ6 3014 aa8.76□□□□□ -1.01
PHKA1-201ENST00000339490 TGP01266 2768 aa8.73□□□□□ -1.01
PHKA1-201ENST00000339490 PRO2289Q9P1D8 64 aa8.72□□□□□ -1.01
PHKA1-201ENST00000339490 MYO15AQ9UKN7 3530 aa8.72□□□□□ -1.01
PHKA1-201ENST00000339490 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
PHKA1-201ENST00000339490 WDFY3Q8IZQ1 3526 aa8.63□□□□□ -1.03
PHKA1-201ENST00000339490 RELNP78509 3460 aa8.56□□□□□ -1.04
PHKA1-201ENST00000339490 PKD1L1Q8TDX9 2849 aa8.53□□□□□ -1.04
PHKA1-201ENST00000339490 MXRA5Q9NR99 2828 aa8.5□□□□□ -1.05
PHKA1-201ENST00000339490 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.05
PHKA1-201ENST00000339490 VWFP04275 2813 aa8.44□□□□□ -1.06
PHKA1-201ENST00000339490 DCHS1Q96JQ0 3298 aa8.43□□□□□ -1.06
PHKA1-201ENST00000339490 KRTAP12-1P59990 96 aa8.43□□□□□ -1.06
PHKA1-201ENST00000339490 KRTAP13-4Q3LI77 160 aa8.41□□□□□ -1.06
PHKA1-201ENST00000339490 KRTAP3-1Q9BYR8 98 aa8.41□□□□□ -1.06
PHKA1-201ENST00000339490 PDZD2O15018 2839 aa8.38□□□□□ -1.07
PHKA1-201ENST00000339490 ZFHX4Q86UP3 3567 aa8.38□□□□□ -1.07
PHKA1-201ENST00000339490 NBPF19A0A087WUL8 3843 aa8.32□□□□□ -1.08
PHKA1-201ENST00000339490 CSMD1Q96PZ7 3565 aa8.29□□□□□ -1.08
PHKA1-201ENST00000339490 LAMA5O15230 3695 aa8.25□□□□□ -1.09
PHKA1-201ENST00000339490 KRTAP10-6P60371 365 aaPredicted RBP8.15□□□□□ -1.1
PHKA1-201ENST00000339490 FBN1P35555 2871 aaKnown RBP8.13□□□□□ -1.11
PHKA1-201ENST00000339490 KRTAP15-1Q3LI76 137 aa8.12□□□□□ -1.11
PHKA1-201ENST00000339490 DMDP11532 3685 aa8.07□□□□□ -1.12
PHKA1-201ENST00000339490 SMG1Q96Q15 3661 aaKnown RBP8.07□□□□□ -1.12
PHKA1-201ENST00000339490 MUC3AQ02505 3323 aa8.07□□□□□ -1.12
PHKA1-201ENST00000339490 ZFHX3Q15911 3703 aa8.03□□□□□ -1.12
PHKA1-201ENST00000339490 FBN3Q75N90 2809 aa8.02□□□□□ -1.13
PHKA1-201ENST00000339490 ANK3Q12955 4377 aaKnown RBP8.02□□□□□ -1.13
PHKA1-201ENST00000339490 SRRM2Q9UQ35 2752 aaKnown RBP8□□□□□ -1.13
PHKA1-201ENST00000339490 OTOGQ6ZRI0 2925 aa7.98□□□□□ -1.13
PHKA1-201ENST00000339490 MEGF8Q7Z7M0 2845 aa7.94□□□□□ -1.14
PHKA1-201ENST00000339490 SVEP1Q4LDE5 3571 aa7.94□□□□□ -1.14
PHKA1-201ENST00000339490 MT1HL1P0DM35 61 aa7.91□□□□□ -1.14
PHKA1-201ENST00000339490 KRTAP3-3Q9BYR6 98 aa7.85□□□□□ -1.15
PHKA1-201ENST00000339490 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
PHKA1-201ENST00000339490 CUBNO60494 3623 aa7.84□□□□□ -1.15
PHKA1-201ENST00000339490 CSMD2Q7Z408 3487 aa7.84□□□□□ -1.16
PHKA1-201ENST00000339490 COL7A1Q02388 2944 aa7.8□□□□□ -1.16
PHKA1-201ENST00000339490 TRRAPQ9Y4A5 3859 aa7.78□□□□□ -1.16
PHKA1-201ENST00000339490 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
PHKA1-201ENST00000339490 SPENQ96T58 3664 aaKnown RBP7.72□□□□□ -1.17
PHKA1-201ENST00000339490 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
PHKA1-201ENST00000339490 KRTAP4-5Q9BYR2 181 aa7.7□□□□□ -1.18
PHKA1-201ENST00000339490 KRTAP10-4P60372 401 aaPredicted RBP7.66□□□□□ -1.18
PHKA1-201ENST00000339490 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.18
PHKA1-201ENST00000339490 INE1O15225 51 aa7.57□□□□□ -1.2
PHKA1-201ENST00000339490 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
PHKA1-201ENST00000339490 LCE3AQ5TA76 89 aa7.48□□□□□ -1.21
PHKA1-201ENST00000339490 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
PHKA1-201ENST00000339490 BSNQ9UPA5 3926 aa7.44□□□□□ -1.22
PHKA1-201ENST00000339490 VPS13CQ709C8 3753 aa7.4□□□□□ -1.22
PHKA1-201ENST00000339490 ALMS1Q8TCU4 4167 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms