RNA–Protein interactions for RNA: ENST00000335500.8

GPATCH8-201, Transcript of G-patch domain containing 8, humanhuman

TSL 2

Gene GPATCH8, Length 8,109 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-201ENST00000335500 COL12A1Q99715 3063 aa5.09□□□□□ -1.6
GPATCH8-201ENST00000335500 ADM2Q7Z4H4 148 aa5.07□□□□□ -1.6
GPATCH8-201ENST00000335500 ZANQ9Y493 2812 aa5.07□□□□□ -1.6
GPATCH8-201ENST00000335500 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
GPATCH8-201ENST00000335500 TNRC18O15417 2968 aaPredicted RBP5.07□□□□□ -1.6
GPATCH8-201ENST00000335500 KRTAP13-1Q8IUC0 172 aa5.07□□□□□ -1.6
GPATCH8-201ENST00000335500 Q6ZRN7 208 aaPredicted RBP5.07□□□□□ -1.6
GPATCH8-201ENST00000335500 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
GPATCH8-201ENST00000335500 VCANP13611 3396 aa5.06□□□□□ -1.6
GPATCH8-201ENST00000335500 KRTAP21-3Q3LHN1 58 aa5.06□□□□□ -1.6
GPATCH8-201ENST00000335500 ATMQ13315 3056 aa5.06□□□□□ -1.6
GPATCH8-201ENST00000335500 NOTCH2NLQ7Z3S9 236 aa5.06□□□□□ -1.6
GPATCH8-201ENST00000335500 COL6A3P12111 3177 aa5.05□□□□□ -1.6
GPATCH8-201ENST00000335500 NF1P21359 2839 aa5.04□□□□□ -1.6
GPATCH8-201ENST00000335500 DCHS2Q6V1P9 2916 aa5.03□□□□□ -1.6
GPATCH8-201ENST00000335500 TENM1Q9UKZ4 2725 aa5.03□□□□□ -1.6
GPATCH8-201ENST00000335500 HRNRQ86YZ3 2850 aaPredicted RBP5□□□□□ -1.61
GPATCH8-201ENST00000335500 CRYBG3Q68DQ2 2970 aa5□□□□□ -1.61
GPATCH8-201ENST00000335500 FBN2P35556 2912 aa4.97□□□□□ -1.61
GPATCH8-201ENST00000335500 KRTAP7-1Q8IUC3 87 aa4.97□□□□□ -1.61
GPATCH8-201ENST00000335500 A8MUU9 505 aa4.97□□□□□ -1.61
GPATCH8-201ENST00000335500 DMXL1Q9Y485 3027 aa4.96□□□□□ -1.62
GPATCH8-201ENST00000335500 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.62
GPATCH8-201ENST00000335500 SZT2Q5T011 3432 aa4.95□□□□□ -1.62
GPATCH8-201ENST00000335500 C20orf166-AS1Q96NR2 134 aa4.94□□□□□ -1.62
GPATCH8-201ENST00000335500 KRTAP13-2Q52LG2 175 aa4.93□□□□□ -1.62
GPATCH8-201ENST00000335500 CFAP47Q6ZTR5 3102 aa4.92□□□□□ -1.62
GPATCH8-201ENST00000335500 TENM4Q6N022 2769 aa4.92□□□□□ -1.62
GPATCH8-201ENST00000335500 CELSR1Q9NYQ6 3014 aa4.91□□□□□ -1.62
GPATCH8-201ENST00000335500 TENM3Q9P273 2699 aa4.91□□□□□ -1.62
GPATCH8-201ENST00000335500 PP632Q6XCG6 107 aa4.9□□□□□ -1.62
GPATCH8-201ENST00000335500 MXRA5Q9NR99 2828 aa4.89□□□□□ -1.63
GPATCH8-201ENST00000335500 TGP01266 2768 aa4.87□□□□□ -1.63
GPATCH8-201ENST00000335500 TNP1P09430 55 aa4.86□□□□□ -1.63
GPATCH8-201ENST00000335500 SPTBN5Q9NRC6 3674 aaKnown RBP4.85□□□□□ -1.63
GPATCH8-201ENST00000335500 EYSQ5T1H1 3165 aa4.85□□□□□ -1.63
GPATCH8-201ENST00000335500 SPEGQ15772 3267 aa4.84□□□□□ -1.63
GPATCH8-201ENST00000335500 A8MU10 97 aa4.84□□□□□ -1.64
GPATCH8-201ENST00000335500 PDZD2O15018 2839 aa4.83□□□□□ -1.64
GPATCH8-201ENST00000335500 NDUFAF8A1L188 74 aa4.83□□□□□ -1.64
GPATCH8-201ENST00000335500 LOC400499M0QZD8 3231 aa4.78□□□□□ -1.64
GPATCH8-201ENST00000335500 KRTAP1-4P0C5Y4 121 aa4.72□□□□□ -1.65
GPATCH8-201ENST00000335500 TPRXLQ17RH7 258 aa4.72□□□□□ -1.65
GPATCH8-201ENST00000335500 XP32Q5T750 250 aa4.69□□□□□ -1.66
GPATCH8-201ENST00000335500 H0YAA0 97 aa4.69□□□□□ -1.66
GPATCH8-201ENST00000335500 PKD1L1Q8TDX9 2849 aa4.67□□□□□ -1.66
GPATCH8-201ENST00000335500 C10orf95Q9H7T3 257 aa4.65□□□□□ -1.67
GPATCH8-201ENST00000335500 P0C880 135 aa4.64□□□□□ -1.67
GPATCH8-201ENST00000335500 VWFP04275 2813 aa4.63□□□□□ -1.67
GPATCH8-201ENST00000335500 MYO15AQ9UKN7 3530 aa4.62□□□□□ -1.67
GPATCH8-201ENST00000335500 WDFY3Q8IZQ1 3526 aa4.61□□□□□ -1.67
GPATCH8-201ENST00000335500 PRO2289Q9P1D8 64 aa4.61□□□□□ -1.67
GPATCH8-201ENST00000335500 TENM2Q9NT68 2774 aa4.59□□□□□ -1.67
GPATCH8-201ENST00000335500 NBPF19A0A087WUL8 3843 aa4.58□□□□□ -1.68
GPATCH8-201ENST00000335500 KRTAP13-3Q3SY46 172 aa4.57□□□□□ -1.68
GPATCH8-201ENST00000335500 KRTAP10-8P60410 259 aa4.55□□□□□ -1.68
GPATCH8-201ENST00000335500 COL7A1Q02388 2944 aa4.5□□□□□ -1.69
GPATCH8-201ENST00000335500 MEGF8Q7Z7M0 2845 aa4.46□□□□□ -1.69
GPATCH8-201ENST00000335500 ASPMQ8IZT6 3477 aa4.46□□□□□ -1.7
GPATCH8-201ENST00000335500 FBN1P35555 2871 aaKnown RBP4.46□□□□□ -1.7
GPATCH8-201ENST00000335500 LAMA5O15230 3695 aa4.44□□□□□ -1.7
GPATCH8-201ENST00000335500 DCHS1Q96JQ0 3298 aa4.44□□□□□ -1.7
GPATCH8-201ENST00000335500 RELNP78509 3460 aa4.43□□□□□ -1.7
GPATCH8-201ENST00000335500 FBN3Q75N90 2809 aa4.43□□□□□ -1.7
GPATCH8-201ENST00000335500 KRTAP10-10P60014 251 aa4.42□□□□□ -1.7
GPATCH8-201ENST00000335500 ZFHX3Q15911 3703 aa4.41□□□□□ -1.7
GPATCH8-201ENST00000335500 SRRM2Q9UQ35 2752 aaKnown RBP4.41□□□□□ -1.7
GPATCH8-201ENST00000335500 KRTAP13-4Q3LI77 160 aa4.41□□□□□ -1.7
GPATCH8-201ENST00000335500 ZFHX4Q86UP3 3567 aa4.4□□□□□ -1.71
GPATCH8-201ENST00000335500 A0A1B0GVY2 172 aa4.39□□□□□ -1.71
GPATCH8-201ENST00000335500 SPENQ96T58 3664 aaKnown RBP4.37□□□□□ -1.71
GPATCH8-201ENST00000335500 CSMD1Q96PZ7 3565 aa4.37□□□□□ -1.71
GPATCH8-201ENST00000335500 KRTAP12-2P59991 146 aa4.34□□□□□ -1.72
GPATCH8-201ENST00000335500 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
GPATCH8-201ENST00000335500 SMG1Q96Q15 3661 aaKnown RBP4.31□□□□□ -1.72
GPATCH8-201ENST00000335500 TRRAPQ9Y4A5 3859 aa4.3□□□□□ -1.72
GPATCH8-201ENST00000335500 OTOGQ6ZRI0 2925 aa4.29□□□□□ -1.72
GPATCH8-201ENST00000335500 INE1O15225 51 aa4.28□□□□□ -1.72
GPATCH8-201ENST00000335500 DMDP11532 3685 aa4.27□□□□□ -1.73
GPATCH8-201ENST00000335500 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
GPATCH8-201ENST00000335500 BSNQ9UPA5 3926 aa4.21□□□□□ -1.74
GPATCH8-201ENST00000335500 VPS13CQ709C8 3753 aa4.2□□□□□ -1.74
GPATCH8-201ENST00000335500 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
GPATCH8-201ENST00000335500 SVEP1Q4LDE5 3571 aa4.17□□□□□ -1.74
GPATCH8-201ENST00000335500 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
GPATCH8-201ENST00000335500 MUC3AQ02505 3323 aa4.13□□□□□ -1.75
GPATCH8-201ENST00000335500 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
GPATCH8-201ENST00000335500 AKAP9Q99996 3911 aa4.1□□□□□ -1.75
GPATCH8-201ENST00000335500 CUBNO60494 3623 aa4.07□□□□□ -1.76
GPATCH8-201ENST00000335500 ANK3Q12955 4377 aaKnown RBP4.03□□□□□ -1.77
GPATCH8-201ENST00000335500 KRTAP3-2Q9BYR7 98 aa4.01□□□□□ -1.77
GPATCH8-201ENST00000335500 KRTAP3-3Q9BYR6 98 aa4□□□□□ -1.77
GPATCH8-201ENST00000335500 CSMD2Q7Z408 3487 aa3.98□□□□□ -1.77
GPATCH8-201ENST00000335500 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
GPATCH8-201ENST00000335500 KRTAP10-12P60413 245 aa3.96□□□□□ -1.78
GPATCH8-201ENST00000335500 ALMS1Q8TCU4 4167 aa3.94□□□□□ -1.78
GPATCH8-201ENST00000335500 ZNF469Q96JG9 3925 aaPredicted RBP3.91□□□□□ -1.78
GPATCH8-201ENST00000335500 KRTAP10-4P60372 401 aaPredicted RBP3.9□□□□□ -1.78
GPATCH8-201ENST00000335500 CSMD3Q7Z407 3707 aa3.9□□□□□ -1.79
GPATCH8-201ENST00000335500 HUWE1Q7Z6Z7 4374 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms