RNA–Protein interactions for RNA: ENST00000323829.9

SH3TC2-201, Transcript of SH3 domain and tetratricopeptide repeats 2, humanhuman

TSL 1 (best)

Gene SH3TC2, Length 7,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2-201ENST00000323829 SZT2Q5T011 3432 aa5.09□□□□□ -1.59
SH3TC2-201ENST00000323829 UBR5O95071 2799 aaPredicted RBP5.08□□□□□ -1.6
SH3TC2-201ENST00000323829 ZZEF1O43149 2961 aa5.08□□□□□ -1.6
SH3TC2-201ENST00000323829 SPEGQ15772 3267 aa5.07□□□□□ -1.6
SH3TC2-201ENST00000323829 TNRC18O15417 2968 aaPredicted RBP5.06□□□□□ -1.6
SH3TC2-201ENST00000323829 APCP25054 2843 aa5.06□□□□□ -1.6
SH3TC2-201ENST00000323829 COL6A3P12111 3177 aa5.04□□□□□ -1.6
SH3TC2-201ENST00000323829 ATMQ13315 3056 aa5.03□□□□□ -1.6
SH3TC2-201ENST00000323829 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
SH3TC2-201ENST00000323829 STAB2Q8WWQ8 2551 aa5.03□□□□□ -1.6
SH3TC2-201ENST00000323829 DMXL1Q9Y485 3027 aa5.01□□□□□ -1.61
SH3TC2-201ENST00000323829 FLNCQ14315 2725 aa5.01□□□□□ -1.61
SH3TC2-201ENST00000323829 A0A087X002 238 aa5□□□□□ -1.61
SH3TC2-201ENST00000323829 USP34Q70CQ2 3546 aa5□□□□□ -1.61
SH3TC2-201ENST00000323829 KMT2BQ9UMN6 2715 aaPredicted RBP4.99□□□□□ -1.61
SH3TC2-201ENST00000323829 UTP20O75691 2785 aaKnown RBP4.99□□□□□ -1.61
SH3TC2-201ENST00000323829 COL12A1Q99715 3063 aa4.96□□□□□ -1.61
SH3TC2-201ENST00000323829 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
SH3TC2-201ENST00000323829 NSD1Q96L73 2696 aaPredicted RBP4.95□□□□□ -1.62
SH3TC2-201ENST00000323829 NOTCH2NLQ7Z3S9 236 aa4.95□□□□□ -1.62
SH3TC2-201ENST00000323829 ZANQ9Y493 2812 aa4.94□□□□□ -1.62
SH3TC2-201ENST00000323829 IGSF10Q6WRI0 2623 aa4.94□□□□□ -1.62
SH3TC2-201ENST00000323829 PRO2289Q9P1D8 64 aa4.94□□□□□ -1.62
SH3TC2-201ENST00000323829 CELSR2Q9HCU4 2923 aa4.93□□□□□ -1.62
SH3TC2-201ENST00000323829 NIPBLQ6KC79 2804 aaeCLIP4.91□□□□□ -1.62
SH3TC2-201ENST00000323829 KRTAP7-1Q8IUC3 87 aa4.9□□□□□ -1.62
SH3TC2-201ENST00000323829 LOC400499M0QZD8 3231 aa4.9□□□□□ -1.63
SH3TC2-201ENST00000323829 MYO15AQ9UKN7 3530 aa4.89□□□□□ -1.63
SH3TC2-201ENST00000323829 HIVEP1P15822 2718 aa4.88□□□□□ -1.63
SH3TC2-201ENST00000323829 KRTAP11-1Q8IUC1 163 aa4.88□□□□□ -1.63
SH3TC2-201ENST00000323829 ITPR2Q14571 2701 aa4.88□□□□□ -1.63
SH3TC2-201ENST00000323829 NF1P21359 2839 aa4.87□□□□□ -1.63
SH3TC2-201ENST00000323829 HRNRQ86YZ3 2850 aaPredicted RBP4.86□□□□□ -1.63
SH3TC2-201ENST00000323829 FBN2P35556 2912 aa4.86□□□□□ -1.63
SH3TC2-201ENST00000323829 EYSQ5T1H1 3165 aa4.85□□□□□ -1.63
SH3TC2-201ENST00000323829 SPTBN5Q9NRC6 3674 aaKnown RBP4.84□□□□□ -1.64
SH3TC2-201ENST00000323829 Q6ZRN7 208 aaPredicted RBP4.82□□□□□ -1.64
SH3TC2-201ENST00000323829 DCHS2Q6V1P9 2916 aa4.82□□□□□ -1.64
SH3TC2-201ENST00000323829 RPS29P62273 56 aaKnown RBP4.81□□□□□ -1.64
SH3TC2-201ENST00000323829 KRTAP13-1Q8IUC0 172 aa4.79□□□□□ -1.64
SH3TC2-201ENST00000323829 DCHS1Q96JQ0 3298 aa4.77□□□□□ -1.65
SH3TC2-201ENST00000323829 WDFY3Q8IZQ1 3526 aa4.77□□□□□ -1.65
SH3TC2-201ENST00000323829 MXRA5Q9NR99 2828 aa4.76□□□□□ -1.65
SH3TC2-201ENST00000323829 CRCT1Q9UGL9 99 aa4.74□□□□□ -1.65
SH3TC2-201ENST00000323829 KRTAP13-2Q52LG2 175 aa4.72□□□□□ -1.65
SH3TC2-201ENST00000323829 ASPMQ8IZT6 3477 aa4.71□□□□□ -1.66
SH3TC2-201ENST00000323829 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
SH3TC2-201ENST00000323829 TGP01266 2768 aa4.62□□□□□ -1.67
SH3TC2-201ENST00000323829 H0YAA0 97 aa4.62□□□□□ -1.67
SH3TC2-201ENST00000323829 PDZD2O15018 2839 aa4.61□□□□□ -1.67
SH3TC2-201ENST00000323829 CSMD1Q96PZ7 3565 aa4.61□□□□□ -1.67
SH3TC2-201ENST00000323829 CELSR1Q9NYQ6 3014 aa4.61□□□□□ -1.67
SH3TC2-201ENST00000323829 KRTAP15-1Q3LI76 137 aa4.6□□□□□ -1.67
SH3TC2-201ENST00000323829 ZFHX4Q86UP3 3567 aa4.59□□□□□ -1.67
SH3TC2-201ENST00000323829 TENM3Q9P273 2699 aa4.59□□□□□ -1.67
SH3TC2-201ENST00000323829 XP32Q5T750 250 aa4.58□□□□□ -1.68
SH3TC2-201ENST00000323829 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
SH3TC2-201ENST00000323829 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
SH3TC2-201ENST00000323829 RELNP78509 3460 aa4.55□□□□□ -1.68
SH3TC2-201ENST00000323829 TENM4Q6N022 2769 aa4.55□□□□□ -1.68
SH3TC2-201ENST00000323829 SMG1Q96Q15 3661 aaKnown RBP4.52□□□□□ -1.69
SH3TC2-201ENST00000323829 PKD1L1Q8TDX9 2849 aa4.49□□□□□ -1.69
SH3TC2-201ENST00000323829 LAMA5O15230 3695 aa4.47□□□□□ -1.69
SH3TC2-201ENST00000323829 KRTAP1-4P0C5Y4 121 aa4.47□□□□□ -1.69
SH3TC2-201ENST00000323829 TENM1Q9UKZ4 2725 aa4.45□□□□□ -1.7
SH3TC2-201ENST00000323829 DMDP11532 3685 aa4.43□□□□□ -1.7
SH3TC2-201ENST00000323829 VWFP04275 2813 aa4.42□□□□□ -1.7
SH3TC2-201ENST00000323829 NBPF19A0A087WUL8 3843 aa4.42□□□□□ -1.7
SH3TC2-201ENST00000323829 SVEP1Q4LDE5 3571 aa4.41□□□□□ -1.7
SH3TC2-201ENST00000323829 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
SH3TC2-201ENST00000323829 CUBNO60494 3623 aa4.4□□□□□ -1.7
SH3TC2-201ENST00000323829 ZFHX3Q15911 3703 aa4.39□□□□□ -1.71
SH3TC2-201ENST00000323829 MUC3AQ02505 3323 aa4.38□□□□□ -1.71
SH3TC2-201ENST00000323829 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
SH3TC2-201ENST00000323829 SPENQ96T58 3664 aaKnown RBP4.35□□□□□ -1.71
SH3TC2-201ENST00000323829 KRTAP13-4Q3LI77 160 aa4.35□□□□□ -1.71
SH3TC2-201ENST00000323829 FBN1P35555 2871 aaKnown RBP4.31□□□□□ -1.72
SH3TC2-201ENST00000323829 TENM2Q9NT68 2774 aa4.31□□□□□ -1.72
SH3TC2-201ENST00000323829 FBN3Q75N90 2809 aa4.27□□□□□ -1.73
SH3TC2-201ENST00000323829 INE1O15225 51 aa4.26□□□□□ -1.73
SH3TC2-201ENST00000323829 MEGF8Q7Z7M0 2845 aa4.23□□□□□ -1.73
SH3TC2-201ENST00000323829 KRTAP10-5P60370 271 aa4.22□□□□□ -1.73
SH3TC2-201ENST00000323829 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
SH3TC2-201ENST00000323829 COL7A1Q02388 2944 aa4.21□□□□□ -1.74
SH3TC2-201ENST00000323829 OTOGQ6ZRI0 2925 aa4.2□□□□□ -1.74
SH3TC2-201ENST00000323829 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
SH3TC2-201ENST00000323829 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
SH3TC2-201ENST00000323829 KRTAP10-12P60413 245 aa4.11□□□□□ -1.75
SH3TC2-201ENST00000323829 CSMD2Q7Z408 3487 aa4.11□□□□□ -1.75
SH3TC2-201ENST00000323829 TRRAPQ9Y4A5 3859 aa4.08□□□□□ -1.76
SH3TC2-201ENST00000323829 BSNQ9UPA5 3926 aa4.07□□□□□ -1.76
SH3TC2-201ENST00000323829 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
SH3TC2-201ENST00000323829 VPS13CQ709C8 3753 aa4.03□□□□□ -1.76
SH3TC2-201ENST00000323829 KRTAP3-2Q9BYR7 98 aa4.01□□□□□ -1.77
SH3TC2-201ENST00000323829 KRTAP4-5Q9BYR2 181 aa3.99□□□□□ -1.77
SH3TC2-201ENST00000323829 KRTAP3-3Q9BYR6 98 aa3.97□□□□□ -1.77
SH3TC2-201ENST00000323829 ANK3Q12955 4377 aaKnown RBP3.94□□□□□ -1.78
SH3TC2-201ENST00000323829 KRTAP12-3P60328 96 aa3.93□□□□□ -1.78
SH3TC2-201ENST00000323829 MT1HL1P0DM35 61 aa3.93□□□□□ -1.78
SH3TC2-201ENST00000323829 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms