RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 CELSR2Q9HCU4 2923 aa5.68□□□□□ -1.5
COL12A1-201ENST00000322507 TACC2O95359 2948 aa5.68□□□□□ -1.5
COL12A1-201ENST00000322507 TENM3Q9P273 2699 aa5.68□□□□□ -1.5
COL12A1-201ENST00000322507 TNP1P09430 55 aa5.68□□□□□ -1.5
COL12A1-201ENST00000322507 ZZEF1O43149 2961 aa5.67□□□□□ -1.5
COL12A1-201ENST00000322507 KRTAP29-1A8MX34 341 aaPredicted RBP5.66□□□□□ -1.5
COL12A1-201ENST00000322507 Q5VSD8 79 aa5.65□□□□□ -1.5
COL12A1-201ENST00000322507 P0C880 135 aa5.64□□□□□ -1.51
COL12A1-201ENST00000322507 COL6A3P12111 3177 aa5.63□□□□□ -1.51
COL12A1-201ENST00000322507 NBEAQ8NFP9 2946 aa5.62□□□□□ -1.51
COL12A1-201ENST00000322507 USP34Q70CQ2 3546 aa5.59□□□□□ -1.51
COL12A1-201ENST00000322507 DMXL2Q8TDJ6 3036 aa5.59□□□□□ -1.51
COL12A1-201ENST00000322507 KRTAP1-5Q9BYS1 174 aa5.59□□□□□ -1.52
COL12A1-201ENST00000322507 A8MU10 97 aa5.57□□□□□ -1.52
COL12A1-201ENST00000322507 ZANQ9Y493 2812 aa5.56□□□□□ -1.52
COL12A1-201ENST00000322507 SPTBN5Q9NRC6 3674 aaKnown RBP5.56□□□□□ -1.52
COL12A1-201ENST00000322507 DCHS2Q6V1P9 2916 aa5.56□□□□□ -1.52
COL12A1-201ENST00000322507 TNRC18O15417 2968 aaPredicted RBP5.55□□□□□ -1.52
COL12A1-201ENST00000322507 MYO15AQ9UKN7 3530 aa5.55□□□□□ -1.52
COL12A1-201ENST00000322507 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
COL12A1-201ENST00000322507 TENM4Q6N022 2769 aa5.53□□□□□ -1.52
COL12A1-201ENST00000322507 CRYBG3Q68DQ2 2970 aa5.52□□□□□ -1.53
COL12A1-201ENST00000322507 COL12A1Q99715 3063 aa5.51□□□□□ -1.53
COL12A1-201ENST00000322507 SPEGQ15772 3267 aa5.5□□□□□ -1.53
COL12A1-201ENST00000322507 BOD1L1Q8NFC6 3051 aa5.48□□□□□ -1.53
COL12A1-201ENST00000322507 PDZD2O15018 2839 aa5.48□□□□□ -1.53
COL12A1-201ENST00000322507 INE1O15225 51 aa5.47□□□□□ -1.53
COL12A1-201ENST00000322507 KRTAP10-2P60368 255 aa5.47□□□□□ -1.53
COL12A1-201ENST00000322507 WDFY3Q8IZQ1 3526 aa5.47□□□□□ -1.53
COL12A1-201ENST00000322507 TGP01266 2768 aa5.45□□□□□ -1.54
COL12A1-201ENST00000322507 ADGRG4Q8IZF6 3080 aa5.44□□□□□ -1.54
COL12A1-201ENST00000322507 CFAP47Q6ZTR5 3102 aa5.44□□□□□ -1.54
COL12A1-201ENST00000322507 ATMQ13315 3056 aa5.42□□□□□ -1.54
COL12A1-201ENST00000322507 KRTAP13-1Q8IUC0 172 aa5.42□□□□□ -1.54
COL12A1-201ENST00000322507 MXRA5Q9NR99 2828 aa5.41□□□□□ -1.54
COL12A1-201ENST00000322507 FBN2P35556 2912 aa5.41□□□□□ -1.54
COL12A1-201ENST00000322507 Q6ZRN7 208 aaPredicted RBP5.41□□□□□ -1.54
COL12A1-201ENST00000322507 EYSQ5T1H1 3165 aa5.39□□□□□ -1.55
COL12A1-201ENST00000322507 KRTAP21-3Q3LHN1 58 aa5.38□□□□□ -1.55
COL12A1-201ENST00000322507 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
COL12A1-201ENST00000322507 HRNRQ86YZ3 2850 aaPredicted RBP5.36□□□□□ -1.55
COL12A1-201ENST00000322507 ASPMQ8IZT6 3477 aa5.33□□□□□ -1.56
COL12A1-201ENST00000322507 H0YAA0 97 aa5.33□□□□□ -1.56
COL12A1-201ENST00000322507 CELSR1Q9NYQ6 3014 aa5.31□□□□□ -1.56
COL12A1-201ENST00000322507 DCHS1Q96JQ0 3298 aa5.31□□□□□ -1.56
COL12A1-201ENST00000322507 PKD1L1Q8TDX9 2849 aa5.3□□□□□ -1.56
COL12A1-201ENST00000322507 KRTAP13-2Q52LG2 175 aa5.28□□□□□ -1.56
COL12A1-201ENST00000322507 VWFP04275 2813 aa5.28□□□□□ -1.56
COL12A1-201ENST00000322507 DMXL1Q9Y485 3027 aa5.27□□□□□ -1.57
COL12A1-201ENST00000322507 LOC400499M0QZD8 3231 aa5.25□□□□□ -1.57
COL12A1-201ENST00000322507 SRRM2Q9UQ35 2752 aaKnown RBP5.23□□□□□ -1.57
COL12A1-201ENST00000322507 KRTAP7-1Q8IUC3 87 aa5.23□□□□□ -1.57
COL12A1-201ENST00000322507 LAMA5O15230 3695 aa5.21□□□□□ -1.58
COL12A1-201ENST00000322507 KRTAP10-8P60410 259 aa5.2□□□□□ -1.58
COL12A1-201ENST00000322507 PRO2289Q9P1D8 64 aa5.19□□□□□ -1.58
COL12A1-201ENST00000322507 ZFHX4Q86UP3 3567 aa5.19□□□□□ -1.58
COL12A1-201ENST00000322507 TENM2Q9NT68 2774 aa5.18□□□□□ -1.58
COL12A1-201ENST00000322507 TPRXLQ17RH7 258 aa5.17□□□□□ -1.58
COL12A1-201ENST00000322507 CSMD1Q96PZ7 3565 aa5.14□□□□□ -1.59
COL12A1-201ENST00000322507 XP32Q5T750 250 aa5.09□□□□□ -1.59
COL12A1-201ENST00000322507 RELNP78509 3460 aa5.08□□□□□ -1.6
COL12A1-201ENST00000322507 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
COL12A1-201ENST00000322507 NBPF19A0A087WUL8 3843 aa5.05□□□□□ -1.6
COL12A1-201ENST00000322507 KRTAP1-4P0C5Y4 121 aa5.04□□□□□ -1.6
COL12A1-201ENST00000322507 DMDP11532 3685 aa5.04□□□□□ -1.6
COL12A1-201ENST00000322507 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
COL12A1-201ENST00000322507 SMG1Q96Q15 3661 aaKnown RBP5□□□□□ -1.61
COL12A1-201ENST00000322507 SPENQ96T58 3664 aaKnown RBP4.99□□□□□ -1.61
COL12A1-201ENST00000322507 FBN1P35555 2871 aaKnown RBP4.98□□□□□ -1.61
COL12A1-201ENST00000322507 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
COL12A1-201ENST00000322507 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.62
COL12A1-201ENST00000322507 KRTAP13-3Q3SY46 172 aa4.93□□□□□ -1.62
COL12A1-201ENST00000322507 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
COL12A1-201ENST00000322507 SVEP1Q4LDE5 3571 aa4.92□□□□□ -1.62
COL12A1-201ENST00000322507 ZFHX3Q15911 3703 aa4.88□□□□□ -1.63
COL12A1-201ENST00000322507 KRTAP10-10P60014 251 aa4.86□□□□□ -1.63
COL12A1-201ENST00000322507 CUBNO60494 3623 aa4.84□□□□□ -1.63
COL12A1-201ENST00000322507 FBN3Q75N90 2809 aa4.84□□□□□ -1.64
COL12A1-201ENST00000322507 MUC3AQ02505 3323 aa4.76□□□□□ -1.65
COL12A1-201ENST00000322507 KRTAP12-1P59990 96 aa4.74□□□□□ -1.65
COL12A1-201ENST00000322507 BSNQ9UPA5 3926 aa4.73□□□□□ -1.65
COL12A1-201ENST00000322507 A0A1B0GVY2 172 aa4.7□□□□□ -1.66
COL12A1-201ENST00000322507 OTOGQ6ZRI0 2925 aa4.69□□□□□ -1.66
COL12A1-201ENST00000322507 VPS13CQ709C8 3753 aa4.68□□□□□ -1.66
COL12A1-201ENST00000322507 TRRAPQ9Y4A5 3859 aa4.68□□□□□ -1.66
COL12A1-201ENST00000322507 AKAP9Q99996 3911 aa4.65□□□□□ -1.66
COL12A1-201ENST00000322507 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.67
COL12A1-201ENST00000322507 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
COL12A1-201ENST00000322507 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
COL12A1-201ENST00000322507 CSMD3Q7Z407 3707 aa4.45□□□□□ -1.7
COL12A1-201ENST00000322507 ALMS1Q8TCU4 4167 aa4.4□□□□□ -1.7
COL12A1-201ENST00000322507 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
COL12A1-201ENST00000322507 ZNF469Q96JG9 3925 aaPredicted RBP4.35□□□□□ -1.71
COL12A1-201ENST00000322507 MT3P25713 68 aa4.31□□□□□ -1.72
COL12A1-201ENST00000322507 KRTAP19-4Q3LI73 84 aa4.28□□□□□ -1.72
COL12A1-201ENST00000322507 DNAH1Q9P2D7 4330 aa4.27□□□□□ -1.73
COL12A1-201ENST00000322507 ANK3Q12955 4377 aaKnown RBP4.26□□□□□ -1.73
COL12A1-201ENST00000322507 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
COL12A1-201ENST00000322507 KRTAP3-2Q9BYR7 98 aa4.24□□□□□ -1.73
COL12A1-201ENST00000322507 DNAH7Q8WXX0 4024 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms