RNA–Protein interactions for RNA: ENST00000319792.7

NECTIN3-201, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NECTIN3, Length 1,549 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-201ENST00000319792 A0A1B0GVX0 72 aa17.73■□□□□ 0.43
NECTIN3-201ENST00000319792 MYCBP2O75592 4640 aa17.7■□□□□ 0.42
NECTIN3-201ENST00000319792 HCG22E2RYF7 251 aa17.66■□□□□ 0.42
NECTIN3-201ENST00000319792 KRTAP29-1A8MX34 341 aaPredicted RBP17.65■□□□□ 0.42
NECTIN3-201ENST00000319792 IGHV6-1A0A0B4J1U7 121 aa17.64■□□□□ 0.41
NECTIN3-201ENST00000319792 MMP24-AS1A0A0U1RRL7 71 aa17.62■□□□□ 0.41
NECTIN3-201ENST00000319792 C8orf17Q9NRJ1 99 aa17.61■□□□□ 0.41
NECTIN3-201ENST00000319792 DMBT1Q9UGM3 2413 aaPredicted RBP17.6■□□□□ 0.41
NECTIN3-201ENST00000319792 ABCA13Q86UQ4 5058 aa17.57■□□□□ 0.4
NECTIN3-201ENST00000319792 ATOX1O00244 68 aa17.57■□□□□ 0.4
NECTIN3-201ENST00000319792 WFDC13Q8IUB5 93 aa17.56■□□□□ 0.4
NECTIN3-201ENST00000319792 C8orf87E5RJ46 101 aa17.55■□□□□ 0.4
NECTIN3-201ENST00000319792 CASC2Q6XLA1 102 aa17.54■□□□□ 0.4
NECTIN3-201ENST00000319792 NOTCH2NLQ7Z3S9 236 aa17.53■□□□□ 0.4
NECTIN3-201ENST00000319792 RETNLBQ9BQ08 111 aa17.51■□□□□ 0.39
NECTIN3-201ENST00000319792 hDV103S1A0JD37 113 aa17.5■□□□□ 0.39
NECTIN3-201ENST00000319792 LINC00313P59037 77 aa17.45■□□□□ 0.38
NECTIN3-201ENST00000319792 TMEM254Q8TBM7 123 aa17.44■□□□□ 0.38
NECTIN3-201ENST00000319792 ANAPC13Q9BS18 74 aa17.44■□□□□ 0.38
NECTIN3-201ENST00000319792 SMIM20Q8N5G0 67 aa17.42■□□□□ 0.38
NECTIN3-201ENST00000319792 FP248Q71RG6 208 aaPredicted RBP17.41■□□□□ 0.38
NECTIN3-201ENST00000319792 MRPL34Q9BQ48 92 aaKnown RBP17.38■□□□□ 0.37
NECTIN3-201ENST00000319792 OCR1Q9BZK8 76 aa17.38■□□□□ 0.37
NECTIN3-201ENST00000319792 TRAV7A0A075B6U4 112 aa17.34■□□□□ 0.37
NECTIN3-201ENST00000319792 KRTAP16-1A8MUX0 517 aa17.34■□□□□ 0.37
NECTIN3-201ENST00000319792 SERP2Q8N6R1 65 aa17.34■□□□□ 0.37
NECTIN3-201ENST00000319792 PCP4P48539 62 aa17.32■□□□□ 0.36
NECTIN3-201ENST00000319792 J3QL48 77 aa17.31■□□□□ 0.36
NECTIN3-201ENST00000319792 COX7CP15954 63 aa17.24■□□□□ 0.35
NECTIN3-201ENST00000319792 Q8N9P0 234 aaPredicted RBP17.24■□□□□ 0.35
NECTIN3-201ENST00000319792 IGLV7-46A0A075B6I9 117 aa17.21■□□□□ 0.35
NECTIN3-201ENST00000319792 TP53AIP1Q9HCN2 124 aa17.21■□□□□ 0.34
NECTIN3-201ENST00000319792 C9orf92A6NGG3 77 aa17.19■□□□□ 0.34
NECTIN3-201ENST00000319792 UQCRQO14949 82 aa17.19■□□□□ 0.34
NECTIN3-201ENST00000319792 NDUFS5O43920 106 aa17.18■□□□□ 0.34
NECTIN3-201ENST00000319792 PRR4Q16378 134 aa17.11■□□□□ 0.33
NECTIN3-201ENST00000319792 KRTAP13-3Q3SY46 172 aa17.11■□□□□ 0.33
NECTIN3-201ENST00000319792 C5orf47Q569G3 176 aa17.08■□□□□ 0.32
NECTIN3-201ENST00000319792 CCDC179H3BU77 68 aa17.07■□□□□ 0.32
NECTIN3-201ENST00000319792 C20orf166-AS1Q96NR2 134 aa17.07■□□□□ 0.32
NECTIN3-201ENST00000319792 A8MUU9 505 aa17.05■□□□□ 0.32
NECTIN3-201ENST00000319792 TRAV22A0A0B4J277 110 aa17.02■□□□□ 0.32
NECTIN3-201ENST00000319792 PCLOQ9Y6V0 5065 aa17.02■□□□□ 0.31
NECTIN3-201ENST00000319792 H0Y9P7 68 aa16.98■□□□□ 0.31
NECTIN3-201ENST00000319792 TPRXLQ17RH7 258 aa16.98■□□□□ 0.31
NECTIN3-201ENST00000319792 C20orf197Q8N268 126 aa16.98■□□□□ 0.31
NECTIN3-201ENST00000319792 MP68P56378 58 aa16.96■□□□□ 0.31
NECTIN3-201ENST00000319792 Q5W150 140 aa16.96■□□□□ 0.31
NECTIN3-201ENST00000319792 Q75L30 129 aa16.95■□□□□ 0.3
NECTIN3-201ENST00000319792 A0A0U1RQV1 116 aa16.94■□□□□ 0.3
NECTIN3-201ENST00000319792 KLKP1Q107X0 134 aa16.92■□□□□ 0.3
NECTIN3-201ENST00000319792 H3BPC8 53 aa16.91■□□□□ 0.3
NECTIN3-201ENST00000319792 XP32Q5T750 250 aa16.91■□□□□ 0.3
NECTIN3-201ENST00000319792 ZCCHC13Q8WW36 166 aaKnown RBP16.86■□□□□ 0.29
NECTIN3-201ENST00000319792 SNURFQ9Y675 71 aa16.86■□□□□ 0.29
NECTIN3-201ENST00000319792 LINC00208Q96KT6 92 aa16.85■□□□□ 0.29
NECTIN3-201ENST00000319792 RPL37P61927 97 aaKnown RBP16.81■□□□□ 0.28
NECTIN3-201ENST00000319792 C1orf64Q8NEQ6 169 aa16.81■□□□□ 0.28
NECTIN3-201ENST00000319792 CYSTM1Q9H1C7 97 aa16.8■□□□□ 0.28
NECTIN3-201ENST00000319792 LOC101927531A0A1B0GV80 90 aa16.74■□□□□ 0.27
NECTIN3-201ENST00000319792 NDUFC1O43677 76 aa16.7■□□□□ 0.26
NECTIN3-201ENST00000319792 IGKV2-30P06310 120 aa16.67■□□□□ 0.26
NECTIN3-201ENST00000319792 H7BZZ5 65 aa16.65■□□□□ 0.26
NECTIN3-201ENST00000319792 ATP11AUNQ6ZP68 121 aa16.65■□□□□ 0.26
NECTIN3-201ENST00000319792 CYP4F30PQ9H0H9 118 aa16.63■□□□□ 0.25
NECTIN3-201ENST00000319792 LPAP08519 4548 aa16.58■□□□□ 0.24
NECTIN3-201ENST00000319792 IGKV2D-30A0A075B6S6 120 aa16.55■□□□□ 0.24
NECTIN3-201ENST00000319792 C7orf65Q6ZTY9 151 aa16.53■□□□□ 0.24
NECTIN3-201ENST00000319792 HERC1Q15751 4861 aa16.52■□□□□ 0.23
NECTIN3-201ENST00000319792 PCOTHQ58A44 107 aa16.5■□□□□ 0.23
NECTIN3-201ENST00000319792 LRP2P98164 4655 aa16.49■□□□□ 0.23
NECTIN3-201ENST00000319792 TMEM258P61165 79 aa16.48■□□□□ 0.23
NECTIN3-201ENST00000319792 SPINK7P58062 85 aa16.43■□□□□ 0.22
NECTIN3-201ENST00000319792 SPANXA2-OT1Q8N9U9 137 aa16.4■□□□□ 0.22
NECTIN3-201ENST00000319792 HMCN2Q8NDA2 5059 aa16.39■□□□□ 0.21
NECTIN3-201ENST00000319792 SEC61BP60468 96 aaKnown RBP16.37■□□□□ 0.21
NECTIN3-201ENST00000319792 HRES1P13985 223 aa16.35■□□□□ 0.21
NECTIN3-201ENST00000319792 FAM236DA0A1B0GTK5 79 aa16.33■□□□□ 0.2
NECTIN3-201ENST00000319792 FAM236CP0DP71 79 aa16.33■□□□□ 0.2
NECTIN3-201ENST00000319792 ATP5EP56381 51 aaPredicted RBP16.31■□□□□ 0.2
NECTIN3-201ENST00000319792 MUC17Q685J3 4493 aa16.2■□□□□ 0.18
NECTIN3-201ENST00000319792 C4orf26Q17RF5 130 aa16.13■□□□□ 0.17
NECTIN3-201ENST00000319792 DMAC1Q96GE9 116 aa16.1■□□□□ 0.17
NECTIN3-201ENST00000319792 KRTAP4-1Q9BYQ7 146 aa16.03■□□□□ 0.16
NECTIN3-201ENST00000319792 COX6B2Q6YFQ2 88 aa16.01■□□□□ 0.15
NECTIN3-201ENST00000319792 MPLKIPQ8TAP9 179 aa15.99■□□□□ 0.15
NECTIN3-201ENST00000319792 A8MUN3 132 aa15.99■□□□□ 0.15
NECTIN3-201ENST00000319792 SERP1Q9Y6X1 66 aa15.97■□□□□ 0.15
NECTIN3-201ENST00000319792 KRTAP3-1Q9BYR8 98 aa15.96■□□□□ 0.15
NECTIN3-201ENST00000319792 ACYP2P14621 99 aa15.94■□□□□ 0.14
NECTIN3-201ENST00000319792 RPS28P62857 69 aaKnown RBP15.87■□□□□ 0.13
NECTIN3-201ENST00000319792 COA5Q86WW8 74 aa15.85■□□□□ 0.13
NECTIN3-201ENST00000319792 RBM12B-AS1Q9P1G2 102 aa15.84■□□□□ 0.13
NECTIN3-201ENST00000319792 H1FX-AS1Q4G0G2 97 aa15.67■□□□□ 0.1
NECTIN3-201ENST00000319792 CHKB-CPT1BH3BT56 60 aa15.65■□□□□ 0.1
NECTIN3-201ENST00000319792 UBR4Q5T4S7 5183 aa15.64■□□□□ 0.1
NECTIN3-201ENST00000319792 KRTAP19-2Q3LHN2 52 aa15.63■□□□□ 0.09
NECTIN3-201ENST00000319792 MUC2Q02817 5179 aa15.53■□□□□ 0.08
NECTIN3-201ENST00000319792 RNF213Q63HN8 5207 aa15.53■□□□□ 0.08
NECTIN3-201ENST00000319792 SMIM26A0A096LP01 95 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms