RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 FRYQ5TBA9 3013 aa3.82□□□□□ -1.8
SOX6-201ENST00000316399 TNRC18O15417 2968 aaPredicted RBP3.82□□□□□ -1.8
SOX6-201ENST00000316399 H0YAA0 97 aa3.82□□□□□ -1.8
SOX6-201ENST00000316399 C5orf42Q9H799 3197 aa3.81□□□□□ -1.8
SOX6-201ENST00000316399 PDZD2O15018 2839 aa3.81□□□□□ -1.8
SOX6-201ENST00000316399 ZZEF1O43149 2961 aa3.8□□□□□ -1.8
SOX6-201ENST00000316399 DCHS2Q6V1P9 2916 aa3.8□□□□□ -1.8
SOX6-201ENST00000316399 TGP01266 2768 aa3.79□□□□□ -1.8
SOX6-201ENST00000316399 ATMQ13315 3056 aa3.78□□□□□ -1.8
SOX6-201ENST00000316399 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
SOX6-201ENST00000316399 P0C880 135 aa3.77□□□□□ -1.81
SOX6-201ENST00000316399 CFAP54Q96N23 3096 aa3.76□□□□□ -1.81
SOX6-201ENST00000316399 TACC2O95359 2948 aa3.75□□□□□ -1.81
SOX6-201ENST00000316399 CRYBG3Q68DQ2 2970 aa3.74□□□□□ -1.81
SOX6-201ENST00000316399 TENM2Q9NT68 2774 aa3.73□□□□□ -1.81
SOX6-201ENST00000316399 WDFY4Q6ZS81 3184 aa3.71□□□□□ -1.82
SOX6-201ENST00000316399 COL12A1Q99715 3063 aa3.71□□□□□ -1.82
SOX6-201ENST00000316399 VPS13AQ96RL7 3174 aa3.7□□□□□ -1.82
SOX6-201ENST00000316399 XIRP2A4UGR9 3374 aa3.69□□□□□ -1.82
SOX6-201ENST00000316399 TRIOO75962 3097 aa3.69□□□□□ -1.82
SOX6-201ENST00000316399 A0A1B0GVY2 172 aa3.69□□□□□ -1.82
SOX6-201ENST00000316399 ASH1LQ9NR48 2969 aaKnown RBP3.68□□□□□ -1.82
SOX6-201ENST00000316399 PRUNE2Q8WUY3 3088 aa3.68□□□□□ -1.82
SOX6-201ENST00000316399 VWFP04275 2813 aa3.66□□□□□ -1.82
SOX6-201ENST00000316399 PRO2289Q9P1D8 64 aa3.66□□□□□ -1.82
SOX6-201ENST00000316399 KRTAP10-8P60410 259 aa3.65□□□□□ -1.82
SOX6-201ENST00000316399 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.82
SOX6-201ENST00000316399 FBN2P35556 2912 aa3.65□□□□□ -1.83
SOX6-201ENST00000316399 DNAH14Q0VDD8 3507 aa3.65□□□□□ -1.83
SOX6-201ENST00000316399 DMXL2Q8TDJ6 3036 aa3.65□□□□□ -1.83
SOX6-201ENST00000316399 REV3LO60673 3130 aa3.63□□□□□ -1.83
SOX6-201ENST00000316399 LAMA1P25391 3075 aa3.61□□□□□ -1.83
SOX6-201ENST00000316399 KRTAP13-4Q3LI77 160 aa3.6□□□□□ -1.83
SOX6-201ENST00000316399 SRRM2Q9UQ35 2752 aaKnown RBP3.6□□□□□ -1.83
SOX6-201ENST00000316399 MKI67P46013 3256 aaKnown RBP3.59□□□□□ -1.83
SOX6-201ENST00000316399 ADGRG4Q8IZF6 3080 aa3.59□□□□□ -1.84
SOX6-201ENST00000316399 EYSQ5T1H1 3165 aa3.58□□□□□ -1.84
SOX6-201ENST00000316399 MEGF8Q7Z7M0 2845 aa3.58□□□□□ -1.84
SOX6-201ENST00000316399 PKD1L1Q8TDX9 2849 aa3.57□□□□□ -1.84
SOX6-201ENST00000316399 LAMA3Q16787 3333 aa3.56□□□□□ -1.84
SOX6-201ENST00000316399 BRCA2P51587 3418 aa3.54□□□□□ -1.84
SOX6-201ENST00000316399 OTOGQ6ZRI0 2925 aa3.53□□□□□ -1.84
SOX6-201ENST00000316399 CELSR3Q9NYQ7 3312 aa3.53□□□□□ -1.84
SOX6-201ENST00000316399 COL7A1Q02388 2944 aa3.53□□□□□ -1.84
SOX6-201ENST00000316399 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
SOX6-201ENST00000316399 USP34Q70CQ2 3546 aa3.51□□□□□ -1.85
SOX6-201ENST00000316399 KRTAP3-1Q9BYR8 98 aa3.51□□□□□ -1.85
SOX6-201ENST00000316399 KRTAP12-2P59991 146 aa3.51□□□□□ -1.85
SOX6-201ENST00000316399 BOD1L1Q8NFC6 3051 aa3.51□□□□□ -1.85
SOX6-201ENST00000316399 CDH23Q9H251 3354 aa3.49□□□□□ -1.85
SOX6-201ENST00000316399 KRTAP23-1A1A580 65 aa3.48□□□□□ -1.85
SOX6-201ENST00000316399 KRTAP10-6P60371 365 aaPredicted RBP3.48□□□□□ -1.85
SOX6-201ENST00000316399 KRTAP10-10P60014 251 aa3.47□□□□□ -1.85
SOX6-201ENST00000316399 WDFY3Q8IZQ1 3526 aa3.46□□□□□ -1.85
SOX6-201ENST00000316399 DMXL1Q9Y485 3027 aa3.45□□□□□ -1.86
SOX6-201ENST00000316399 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
SOX6-201ENST00000316399 FBN3Q75N90 2809 aa3.43□□□□□ -1.86
SOX6-201ENST00000316399 FREM2Q5SZK8 3169 aa3.42□□□□□ -1.86
SOX6-201ENST00000316399 CELSR1Q9NYQ6 3014 aa3.41□□□□□ -1.86
SOX6-201ENST00000316399 UNC80Q8N2C7 3258 aa3.4□□□□□ -1.87
SOX6-201ENST00000316399 VCANP13611 3396 aa3.4□□□□□ -1.87
SOX6-201ENST00000316399 SPTBN5Q9NRC6 3674 aaKnown RBP3.38□□□□□ -1.87
SOX6-201ENST00000316399 INE1O15225 51 aa3.37□□□□□ -1.87
SOX6-201ENST00000316399 KRTAP3-2Q9BYR7 98 aa3.36□□□□□ -1.87
SOX6-201ENST00000316399 KRTAP10-4P60372 401 aaPredicted RBP3.35□□□□□ -1.87
SOX6-201ENST00000316399 MYO15AQ9UKN7 3530 aa3.35□□□□□ -1.87
SOX6-201ENST00000316399 COL6A3P12111 3177 aa3.35□□□□□ -1.87
SOX6-201ENST00000316399 KRTAP15-1Q3LI76 137 aa3.33□□□□□ -1.88
SOX6-201ENST00000316399 SZT2Q5T011 3432 aa3.33□□□□□ -1.88
SOX6-201ENST00000316399 MT1HL1P0DM35 61 aa3.32□□□□□ -1.88
SOX6-201ENST00000316399 ASPMQ8IZT6 3477 aa3.32□□□□□ -1.88
SOX6-201ENST00000316399 KRTAP3-3Q9BYR6 98 aa3.32□□□□□ -1.88
SOX6-201ENST00000316399 LAMA5O15230 3695 aa3.31□□□□□ -1.88
SOX6-201ENST00000316399 DMDP11532 3685 aa3.27□□□□□ -1.89
SOX6-201ENST00000316399 SPEGQ15772 3267 aa3.26□□□□□ -1.89
SOX6-201ENST00000316399 ALMS1Q8TCU4 4167 aa3.25□□□□□ -1.89
SOX6-201ENST00000316399 SPENQ96T58 3664 aaKnown RBP3.25□□□□□ -1.89
SOX6-201ENST00000316399 CFAP47Q6ZTR5 3102 aa3.24□□□□□ -1.89
SOX6-201ENST00000316399 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
SOX6-201ENST00000316399 HUWE1Q7Z6Z7 4374 aaKnown RBP3.2□□□□□ -1.9
SOX6-201ENST00000316399 RELNP78509 3460 aa3.2□□□□□ -1.9
SOX6-201ENST00000316399 LOC400499M0QZD8 3231 aa3.16□□□□□ -1.9
SOX6-201ENST00000316399 KRTAP19-4Q3LI73 84 aa3.16□□□□□ -1.9
SOX6-201ENST00000316399 DCHS1Q96JQ0 3298 aa3.14□□□□□ -1.91
SOX6-201ENST00000316399 SMG1Q96Q15 3661 aaKnown RBP3.13□□□□□ -1.91
SOX6-201ENST00000316399 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
SOX6-201ENST00000316399 ZFHX3Q15911 3703 aa3.12□□□□□ -1.91
SOX6-201ENST00000316399 NBPF19A0A087WUL8 3843 aa3.12□□□□□ -1.91
SOX6-201ENST00000316399 CSMD1Q96PZ7 3565 aa3.12□□□□□ -1.91
SOX6-201ENST00000316399 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
SOX6-201ENST00000316399 ZFHX4Q86UP3 3567 aa3.09□□□□□ -1.91
SOX6-201ENST00000316399 VPS13CQ709C8 3753 aa3.07□□□□□ -1.92
SOX6-201ENST00000316399 ANK3Q12955 4377 aaKnown RBP3.06□□□□□ -1.92
SOX6-201ENST00000316399 CUBNO60494 3623 aa3.05□□□□□ -1.92
SOX6-201ENST00000316399 BSNQ9UPA5 3926 aa3□□□□□ -1.93
SOX6-201ENST00000316399 TRRAPQ9Y4A5 3859 aa3□□□□□ -1.93
SOX6-201ENST00000316399 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
SOX6-201ENST00000316399 SVEP1Q4LDE5 3571 aa2.99□□□□□ -1.93
SOX6-201ENST00000316399 MUC3AQ02505 3323 aa2.99□□□□□ -1.93
SOX6-201ENST00000316399 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms