RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 XIRP2A4UGR9 3374 aa10.35□□□□□ -0.75
NR1D2-201ENST00000312521 ATMQ13315 3056 aa10.34□□□□□ -0.75
NR1D2-201ENST00000312521 COL12A1Q99715 3063 aa10.3□□□□□ -0.76
NR1D2-201ENST00000312521 NDUFAF8A1L188 74 aa10.24□□□□□ -0.77
NR1D2-201ENST00000312521 CELSR2Q9HCU4 2923 aa10.24□□□□□ -0.77
NR1D2-201ENST00000312521 UNC80Q8N2C7 3258 aa10.22□□□□□ -0.77
NR1D2-201ENST00000312521 LRBAP50851 2863 aa10.2□□□□□ -0.78
NR1D2-201ENST00000312521 FRYLO94915 3013 aa10.17□□□□□ -0.78
NR1D2-201ENST00000312521 LAMA1P25391 3075 aa10.16□□□□□ -0.78
NR1D2-201ENST00000312521 CRYBG3Q68DQ2 2970 aa10.16□□□□□ -0.78
NR1D2-201ENST00000312521 KRTAP1-4P0C5Y4 121 aa10.16□□□□□ -0.78
NR1D2-201ENST00000312521 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
NR1D2-201ENST00000312521 XP32Q5T750 250 aa10.13□□□□□ -0.79
NR1D2-201ENST00000312521 C10orf95Q9H7T3 257 aa10.12□□□□□ -0.79
NR1D2-201ENST00000312521 ADGRG4Q8IZF6 3080 aa10.1□□□□□ -0.79
NR1D2-201ENST00000312521 NBEAQ8NFP9 2946 aa10.1□□□□□ -0.79
NR1D2-201ENST00000312521 DCHS2Q6V1P9 2916 aa10.09□□□□□ -0.79
NR1D2-201ENST00000312521 PP632Q6XCG6 107 aa10.08□□□□□ -0.8
NR1D2-201ENST00000312521 CELSR3Q9NYQ7 3312 aa10.07□□□□□ -0.8
NR1D2-201ENST00000312521 ZZEF1O43149 2961 aa10.05□□□□□ -0.8
NR1D2-201ENST00000312521 BOD1L1Q8NFC6 3051 aa10.04□□□□□ -0.8
NR1D2-201ENST00000312521 KRTAP10-8P60410 259 aa10.03□□□□□ -0.8
NR1D2-201ENST00000312521 CDH23Q9H251 3354 aa9.95□□□□□ -0.82
NR1D2-201ENST00000312521 TPRXLQ17RH7 258 aa9.95□□□□□ -0.82
NR1D2-201ENST00000312521 TENM1Q9UKZ4 2725 aa9.95□□□□□ -0.82
NR1D2-201ENST00000312521 A0A1B0GVY2 172 aa9.94□□□□□ -0.82
NR1D2-201ENST00000312521 DNAH14Q0VDD8 3507 aa9.93□□□□□ -0.82
NR1D2-201ENST00000312521 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
NR1D2-201ENST00000312521 H0YAA0 97 aa9.9□□□□□ -0.82
NR1D2-201ENST00000312521 NF1P21359 2839 aa9.89□□□□□ -0.83
NR1D2-201ENST00000312521 USP34Q70CQ2 3546 aa9.81□□□□□ -0.84
NR1D2-201ENST00000312521 P0C880 135 aa9.81□□□□□ -0.84
NR1D2-201ENST00000312521 KRTAP10-10P60014 251 aa9.79□□□□□ -0.84
NR1D2-201ENST00000312521 EYSQ5T1H1 3165 aa9.78□□□□□ -0.84
NR1D2-201ENST00000312521 KRTAP13-3Q3SY46 172 aa9.77□□□□□ -0.85
NR1D2-201ENST00000312521 CFAP47Q6ZTR5 3102 aa9.76□□□□□ -0.85
NR1D2-201ENST00000312521 VCANP13611 3396 aa9.75□□□□□ -0.85
NR1D2-201ENST00000312521 COL6A3P12111 3177 aa9.72□□□□□ -0.85
NR1D2-201ENST00000312521 TENM2Q9NT68 2774 aa9.72□□□□□ -0.85
NR1D2-201ENST00000312521 SZT2Q5T011 3432 aa9.72□□□□□ -0.85
NR1D2-201ENST00000312521 PRO2289Q9P1D8 64 aa9.71□□□□□ -0.86
NR1D2-201ENST00000312521 SPTBN5Q9NRC6 3674 aaKnown RBP9.65□□□□□ -0.86
NR1D2-201ENST00000312521 FBN2P35556 2912 aa9.65□□□□□ -0.86
NR1D2-201ENST00000312521 TGP01266 2768 aa9.64□□□□□ -0.87
NR1D2-201ENST00000312521 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
NR1D2-201ENST00000312521 SPEGQ15772 3267 aa9.58□□□□□ -0.88
NR1D2-201ENST00000312521 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
NR1D2-201ENST00000312521 HRNRQ86YZ3 2850 aaPredicted RBP9.54□□□□□ -0.88
NR1D2-201ENST00000312521 MYO15AQ9UKN7 3530 aa9.53□□□□□ -0.88
NR1D2-201ENST00000312521 PDZD2O15018 2839 aa9.51□□□□□ -0.89
NR1D2-201ENST00000312521 CELSR1Q9NYQ6 3014 aa9.46□□□□□ -0.9
NR1D2-201ENST00000312521 MXRA5Q9NR99 2828 aa9.44□□□□□ -0.9
NR1D2-201ENST00000312521 VWFP04275 2813 aa9.37□□□□□ -0.91
NR1D2-201ENST00000312521 DMXL1Q9Y485 3027 aa9.33□□□□□ -0.92
NR1D2-201ENST00000312521 KRTAP12-2P59991 146 aa9.3□□□□□ -0.92
NR1D2-201ENST00000312521 WDFY3Q8IZQ1 3526 aa9.26□□□□□ -0.93
NR1D2-201ENST00000312521 KRTAP13-4Q3LI77 160 aa9.23□□□□□ -0.93
NR1D2-201ENST00000312521 KRTAP12-1P59990 96 aa9.17□□□□□ -0.94
NR1D2-201ENST00000312521 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.94
NR1D2-201ENST00000312521 KRTAP3-1Q9BYR8 98 aa9.1□□□□□ -0.95
NR1D2-201ENST00000312521 LOC400499M0QZD8 3231 aa9.09□□□□□ -0.95
NR1D2-201ENST00000312521 DMDP11532 3685 aa9.09□□□□□ -0.95
NR1D2-201ENST00000312521 DCHS1Q96JQ0 3298 aa8.98□□□□□ -0.97
NR1D2-201ENST00000312521 MUC3AQ02505 3323 aa8.93□□□□□ -0.98
NR1D2-201ENST00000312521 FBN1P35555 2871 aaKnown RBP8.91□□□□□ -0.98
NR1D2-201ENST00000312521 KRTAP15-1Q3LI76 137 aa8.88□□□□□ -0.99
NR1D2-201ENST00000312521 KRTAP10-6P60371 365 aaPredicted RBP8.87□□□□□ -0.99
NR1D2-201ENST00000312521 FBN3Q75N90 2809 aa8.83□□□□□ -1
NR1D2-201ENST00000312521 ZFHX4Q86UP3 3567 aa8.79□□□□□ -1
NR1D2-201ENST00000312521 ASPMQ8IZT6 3477 aa8.76□□□□□ -1.01
NR1D2-201ENST00000312521 MEGF8Q7Z7M0 2845 aa8.73□□□□□ -1.01
NR1D2-201ENST00000312521 SPENQ96T58 3664 aaKnown RBP8.72□□□□□ -1.01
NR1D2-201ENST00000312521 RELNP78509 3460 aa8.71□□□□□ -1.01
NR1D2-201ENST00000312521 SMG1Q96Q15 3661 aaKnown RBP8.68□□□□□ -1.02
NR1D2-201ENST00000312521 COL7A1Q02388 2944 aa8.67□□□□□ -1.02
NR1D2-201ENST00000312521 OTOGQ6ZRI0 2925 aa8.66□□□□□ -1.02
NR1D2-201ENST00000312521 MT1HL1P0DM35 61 aa8.66□□□□□ -1.02
NR1D2-201ENST00000312521 LAMA5O15230 3695 aa8.63□□□□□ -1.03
NR1D2-201ENST00000312521 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.04
NR1D2-201ENST00000312521 CSMD1Q96PZ7 3565 aa8.51□□□□□ -1.05
NR1D2-201ENST00000312521 KRTAP3-3Q9BYR6 98 aa8.49□□□□□ -1.05
NR1D2-201ENST00000312521 BSNQ9UPA5 3926 aa8.47□□□□□ -1.05
NR1D2-201ENST00000312521 KRTAP10-12P60413 245 aa8.47□□□□□ -1.05
NR1D2-201ENST00000312521 ZFHX3Q15911 3703 aa8.46□□□□□ -1.05
NR1D2-201ENST00000312521 NBPF19A0A087WUL8 3843 aa8.45□□□□□ -1.06
NR1D2-201ENST00000312521 INE1O15225 51 aa8.38□□□□□ -1.07
NR1D2-201ENST00000312521 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
NR1D2-201ENST00000312521 SVEP1Q4LDE5 3571 aa8.32□□□□□ -1.08
NR1D2-201ENST00000312521 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
NR1D2-201ENST00000312521 KRTAP4-5Q9BYR2 181 aa8.27□□□□□ -1.09
NR1D2-201ENST00000312521 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
NR1D2-201ENST00000312521 ANK3Q12955 4377 aaKnown RBP8.24□□□□□ -1.09
NR1D2-201ENST00000312521 KRTAP23-1A1A580 65 aa8.19□□□□□ -1.1
NR1D2-201ENST00000312521 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
NR1D2-201ENST00000312521 TRRAPQ9Y4A5 3859 aa8.06□□□□□ -1.12
NR1D2-201ENST00000312521 VPS13CQ709C8 3753 aa8.01□□□□□ -1.13
NR1D2-201ENST00000312521 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
NR1D2-201ENST00000312521 CSMD2Q7Z408 3487 aa7.96□□□□□ -1.14
NR1D2-201ENST00000312521 HUWE1Q7Z6Z7 4374 aaKnown RBP7.85□□□□□ -1.15
NR1D2-201ENST00000312521 CUBNO60494 3623 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms