RNA–Protein interactions for RNA: ENST00000310454.10

GPD2-201, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD2, Length 6,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-201ENST00000310454 ITPR2Q14571 2701 aa8.27□□□□□ -1.09
GPD2-201ENST00000310454 TRANK1O15050 2925 aa8.26□□□□□ -1.09
GPD2-201ENST00000310454 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
GPD2-201ENST00000310454 KRTAP15-1Q3LI76 137 aa8.25□□□□□ -1.09
GPD2-201ENST00000310454 UBR5O95071 2799 aaPredicted RBP8.23□□□□□ -1.09
GPD2-201ENST00000310454 IGSF10Q6WRI0 2623 aa8.23□□□□□ -1.09
GPD2-201ENST00000310454 DSPP15924 2871 aaKnown RBP8.22□□□□□ -1.09
GPD2-201ENST00000310454 KALRNO60229 2985 aa8.21□□□□□ -1.1
GPD2-201ENST00000310454 KMT2BQ9UMN6 2715 aaPredicted RBP8.15□□□□□ -1.11
GPD2-201ENST00000310454 CDH23Q9H251 3354 aa8.15□□□□□ -1.11
GPD2-201ENST00000310454 DMXL2Q8TDJ6 3036 aa8.13□□□□□ -1.11
GPD2-201ENST00000310454 NBEAQ8NFP9 2946 aa8.12□□□□□ -1.11
GPD2-201ENST00000310454 ASH1LQ9NR48 2969 aaKnown RBP8.1□□□□□ -1.11
GPD2-201ENST00000310454 DNAH14Q0VDD8 3507 aa8.09□□□□□ -1.11
GPD2-201ENST00000310454 VCANP13611 3396 aa8.06□□□□□ -1.12
GPD2-201ENST00000310454 TACC2O95359 2948 aa8.05□□□□□ -1.12
GPD2-201ENST00000310454 APCP25054 2843 aa8.04□□□□□ -1.12
GPD2-201ENST00000310454 ITPR1Q14643 2758 aa8.01□□□□□ -1.13
GPD2-201ENST00000310454 INE1O15225 51 aa8.01□□□□□ -1.13
GPD2-201ENST00000310454 LAMA1P25391 3075 aa7.98□□□□□ -1.13
GPD2-201ENST00000310454 ATMQ13315 3056 aa7.97□□□□□ -1.13
GPD2-201ENST00000310454 KRTAP3-1Q9BYR8 98 aa7.95□□□□□ -1.14
GPD2-201ENST00000310454 TENM4Q6N022 2769 aa7.95□□□□□ -1.14
GPD2-201ENST00000310454 LRBAP50851 2863 aa7.94□□□□□ -1.14
GPD2-201ENST00000310454 ADGRG4Q8IZF6 3080 aa7.93□□□□□ -1.14
GPD2-201ENST00000310454 HIVEP1P15822 2718 aa7.93□□□□□ -1.14
GPD2-201ENST00000310454 BOD1L1Q8NFC6 3051 aa7.92□□□□□ -1.14
GPD2-201ENST00000310454 UTP20O75691 2785 aaKnown RBP7.91□□□□□ -1.14
GPD2-201ENST00000310454 CFAP47Q6ZTR5 3102 aa7.91□□□□□ -1.14
GPD2-201ENST00000310454 REV3LO60673 3130 aa7.9□□□□□ -1.14
GPD2-201ENST00000310454 SZT2Q5T011 3432 aa7.9□□□□□ -1.15
GPD2-201ENST00000310454 COL6A3P12111 3177 aa7.89□□□□□ -1.15
GPD2-201ENST00000310454 COL12A1Q99715 3063 aa7.88□□□□□ -1.15
GPD2-201ENST00000310454 FRYLO94915 3013 aa7.84□□□□□ -1.15
GPD2-201ENST00000310454 CRCT1Q9UGL9 99 aa7.83□□□□□ -1.16
GPD2-201ENST00000310454 CRYBG3Q68DQ2 2970 aa7.8□□□□□ -1.16
GPD2-201ENST00000310454 SPEGQ15772 3267 aa7.8□□□□□ -1.16
GPD2-201ENST00000310454 FLNCQ14315 2725 aa7.8□□□□□ -1.16
GPD2-201ENST00000310454 KRTAP10-6P60371 365 aaPredicted RBP7.79□□□□□ -1.16
GPD2-201ENST00000310454 CELSR2Q9HCU4 2923 aa7.77□□□□□ -1.17
GPD2-201ENST00000310454 ZZEF1O43149 2961 aa7.76□□□□□ -1.17
GPD2-201ENST00000310454 KRTAP10-12P60413 245 aa7.66□□□□□ -1.18
GPD2-201ENST00000310454 TGP01266 2768 aa7.65□□□□□ -1.18
GPD2-201ENST00000310454 DCHS2Q6V1P9 2916 aa7.63□□□□□ -1.19
GPD2-201ENST00000310454 NIPBLQ6KC79 2804 aaeCLIP7.63□□□□□ -1.19
GPD2-201ENST00000310454 MYO15AQ9UKN7 3530 aa7.58□□□□□ -1.2
GPD2-201ENST00000310454 ZANQ9Y493 2812 aa7.55□□□□□ -1.2
GPD2-201ENST00000310454 SPTBN5Q9NRC6 3674 aaKnown RBP7.55□□□□□ -1.2
GPD2-201ENST00000310454 EYSQ5T1H1 3165 aa7.54□□□□□ -1.2
GPD2-201ENST00000310454 TENM1Q9UKZ4 2725 aa7.53□□□□□ -1.2
GPD2-201ENST00000310454 TENM2Q9NT68 2774 aa7.52□□□□□ -1.21
GPD2-201ENST00000310454 TENM3Q9P273 2699 aa7.52□□□□□ -1.21
GPD2-201ENST00000310454 USP34Q70CQ2 3546 aa7.47□□□□□ -1.21
GPD2-201ENST00000310454 TNRC18O15417 2968 aaPredicted RBP7.47□□□□□ -1.21
GPD2-201ENST00000310454 FBN2P35556 2912 aa7.46□□□□□ -1.22
GPD2-201ENST00000310454 KRTAP12-3P60328 96 aa7.45□□□□□ -1.22
GPD2-201ENST00000310454 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
GPD2-201ENST00000310454 DMXL1Q9Y485 3027 aa7.44□□□□□ -1.22
GPD2-201ENST00000310454 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
GPD2-201ENST00000310454 LOC400499M0QZD8 3231 aa7.38□□□□□ -1.23
GPD2-201ENST00000310454 NF1P21359 2839 aa7.37□□□□□ -1.23
GPD2-201ENST00000310454 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
GPD2-201ENST00000310454 HRNRQ86YZ3 2850 aaPredicted RBP7.37□□□□□ -1.23
GPD2-201ENST00000310454 WDFY3Q8IZQ1 3526 aa7.32□□□□□ -1.24
GPD2-201ENST00000310454 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
GPD2-201ENST00000310454 KRTAP10-5P60370 271 aa7.28□□□□□ -1.24
GPD2-201ENST00000310454 CELSR1Q9NYQ6 3014 aa7.25□□□□□ -1.25
GPD2-201ENST00000310454 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
GPD2-201ENST00000310454 DCHS1Q96JQ0 3298 aa7.16□□□□□ -1.26
GPD2-201ENST00000310454 RELNP78509 3460 aa7.13□□□□□ -1.27
GPD2-201ENST00000310454 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
GPD2-201ENST00000310454 PDZD2O15018 2839 aa7.11□□□□□ -1.27
GPD2-201ENST00000310454 ZFHX4Q86UP3 3567 aa7.09□□□□□ -1.27
GPD2-201ENST00000310454 MXRA5Q9NR99 2828 aa7.07□□□□□ -1.28
GPD2-201ENST00000310454 ASPMQ8IZT6 3477 aa7.07□□□□□ -1.28
GPD2-201ENST00000310454 VWFP04275 2813 aa7.07□□□□□ -1.28
GPD2-201ENST00000310454 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
GPD2-201ENST00000310454 KRTAP8-1Q8IUC2 63 aa7.01□□□□□ -1.29
GPD2-201ENST00000310454 CSMD1Q96PZ7 3565 aa7□□□□□ -1.29
GPD2-201ENST00000310454 DMDP11532 3685 aa6.99□□□□□ -1.29
GPD2-201ENST00000310454 SMG1Q96Q15 3661 aaKnown RBP6.95□□□□□ -1.3
GPD2-201ENST00000310454 LAMA5O15230 3695 aa6.93□□□□□ -1.3
GPD2-201ENST00000310454 KRTAP4-5Q9BYR2 181 aa6.88□□□□□ -1.31
GPD2-201ENST00000310454 MUC3AQ02505 3323 aa6.87□□□□□ -1.31
GPD2-201ENST00000310454 KRTAP10-4P60372 401 aaPredicted RBP6.83□□□□□ -1.32
GPD2-201ENST00000310454 FBN1P35555 2871 aaKnown RBP6.8□□□□□ -1.32
GPD2-201ENST00000310454 SRRM2Q9UQ35 2752 aaKnown RBP6.8□□□□□ -1.32
GPD2-201ENST00000310454 FBN3Q75N90 2809 aa6.79□□□□□ -1.32
GPD2-201ENST00000310454 CUBNO60494 3623 aa6.76□□□□□ -1.33
GPD2-201ENST00000310454 SVEP1Q4LDE5 3571 aa6.76□□□□□ -1.33
GPD2-201ENST00000310454 NBPF19A0A087WUL8 3843 aa6.74□□□□□ -1.33
GPD2-201ENST00000310454 ALMS1Q8TCU4 4167 aa6.68□□□□□ -1.34
GPD2-201ENST00000310454 SPENQ96T58 3664 aaKnown RBP6.67□□□□□ -1.34
GPD2-201ENST00000310454 ANK3Q12955 4377 aaKnown RBP6.67□□□□□ -1.34
GPD2-201ENST00000310454 MEGF8Q7Z7M0 2845 aa6.64□□□□□ -1.35
GPD2-201ENST00000310454 HUWE1Q7Z6Z7 4374 aaKnown RBP6.62□□□□□ -1.35
GPD2-201ENST00000310454 ZFHX3Q15911 3703 aa6.6□□□□□ -1.35
GPD2-201ENST00000310454 KRTAP10-7P60409 375 aaPredicted RBP6.54□□□□□ -1.36
GPD2-201ENST00000310454 COL7A1Q02388 2944 aa6.54□□□□□ -1.36
GPD2-201ENST00000310454 CSMD2Q7Z408 3487 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms