RNA–Protein interactions for RNA: ENST00000306329.15

MTCL1-201, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MTCL1, Length 5,718 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-201ENST00000306329 BAHCC1Q9P281 2608 aa11.1□□□□□ -0.63
MTCL1-201ENST00000306329 IGSF10Q6WRI0 2623 aa11.04□□□□□ -0.64
MTCL1-201ENST00000306329 ADGRG4Q8IZF6 3080 aa11.04□□□□□ -0.64
MTCL1-201ENST00000306329 LRBAP50851 2863 aa11.04□□□□□ -0.64
MTCL1-201ENST00000306329 ITPR2Q14571 2701 aa11.03□□□□□ -0.64
MTCL1-201ENST00000306329 ATMQ13315 3056 aa10.98□□□□□ -0.65
MTCL1-201ENST00000306329 KRTAP10-8P60410 259 aa10.94□□□□□ -0.66
MTCL1-201ENST00000306329 PP632Q6XCG6 107 aa10.92□□□□□ -0.66
MTCL1-201ENST00000306329 USP34Q70CQ2 3546 aa10.92□□□□□ -0.66
MTCL1-201ENST00000306329 EYSQ5T1H1 3165 aa10.91□□□□□ -0.66
MTCL1-201ENST00000306329 ITPR1Q14643 2758 aa10.9□□□□□ -0.66
MTCL1-201ENST00000306329 REV3LO60673 3130 aa10.89□□□□□ -0.67
MTCL1-201ENST00000306329 A0A1B0GVY2 172 aa10.88□□□□□ -0.67
MTCL1-201ENST00000306329 XP32Q5T750 250 aa10.88□□□□□ -0.67
MTCL1-201ENST00000306329 APCP25054 2843 aa10.85□□□□□ -0.67
MTCL1-201ENST00000306329 DMXL2Q8TDJ6 3036 aa10.84□□□□□ -0.67
MTCL1-201ENST00000306329 MYO15AQ9UKN7 3530 aa10.84□□□□□ -0.67
MTCL1-201ENST00000306329 KRTAP1-4P0C5Y4 121 aa10.83□□□□□ -0.68
MTCL1-201ENST00000306329 H0YAA0 97 aa10.82□□□□□ -0.68
MTCL1-201ENST00000306329 COL12A1Q99715 3063 aa10.81□□□□□ -0.68
MTCL1-201ENST00000306329 CFAP47Q6ZTR5 3102 aa10.78□□□□□ -0.68
MTCL1-201ENST00000306329 TACC2O95359 2948 aa10.78□□□□□ -0.68
MTCL1-201ENST00000306329 UTP20O75691 2785 aaKnown RBP10.77□□□□□ -0.68
MTCL1-201ENST00000306329 KMT2BQ9UMN6 2715 aaPredicted RBP10.77□□□□□ -0.69
MTCL1-201ENST00000306329 HIVEP1P15822 2718 aa10.75□□□□□ -0.69
MTCL1-201ENST00000306329 P0C880 135 aa10.74□□□□□ -0.69
MTCL1-201ENST00000306329 ZZEF1O43149 2961 aa10.73□□□□□ -0.69
MTCL1-201ENST00000306329 ASH1LQ9NR48 2969 aaKnown RBP10.71□□□□□ -0.69
MTCL1-201ENST00000306329 FLNCQ14315 2725 aa10.7□□□□□ -0.7
MTCL1-201ENST00000306329 KRTAP21-3Q3LHN1 58 aa10.69□□□□□ -0.7
MTCL1-201ENST00000306329 LOC400499M0QZD8 3231 aa10.64□□□□□ -0.71
MTCL1-201ENST00000306329 TNRC18O15417 2968 aaPredicted RBP10.63□□□□□ -0.71
MTCL1-201ENST00000306329 KRTAP10-10P60014 251 aa10.59□□□□□ -0.71
MTCL1-201ENST00000306329 DMXL1Q9Y485 3027 aa10.59□□□□□ -0.71
MTCL1-201ENST00000306329 TPRXLQ17RH7 258 aa10.58□□□□□ -0.72
MTCL1-201ENST00000306329 TENM4Q6N022 2769 aa10.56□□□□□ -0.72
MTCL1-201ENST00000306329 CRYBG3Q68DQ2 2970 aa10.54□□□□□ -0.72
MTCL1-201ENST00000306329 HRNRQ86YZ3 2850 aaPredicted RBP10.51□□□□□ -0.73
MTCL1-201ENST00000306329 PRO2289Q9P1D8 64 aa10.47□□□□□ -0.73
MTCL1-201ENST00000306329 WDFY3Q8IZQ1 3526 aa10.46□□□□□ -0.74
MTCL1-201ENST00000306329 NIPBLQ6KC79 2804 aaeCLIP10.46□□□□□ -0.744e-7■■■■■ 50.1
MTCL1-201ENST00000306329 KRTAP13-3Q3SY46 172 aa10.43□□□□□ -0.74
MTCL1-201ENST00000306329 CELSR2Q9HCU4 2923 aa10.42□□□□□ -0.74
MTCL1-201ENST00000306329 ZANQ9Y493 2812 aa10.41□□□□□ -0.74
MTCL1-201ENST00000306329 DCHS2Q6V1P9 2916 aa10.27□□□□□ -0.76
MTCL1-201ENST00000306329 ZFHX4Q86UP3 3567 aa10.26□□□□□ -0.77
MTCL1-201ENST00000306329 FBN2P35556 2912 aa10.22□□□□□ -0.77
MTCL1-201ENST00000306329 RELNP78509 3460 aa10.22□□□□□ -0.77
MTCL1-201ENST00000306329 ASPMQ8IZT6 3477 aa10.2□□□□□ -0.78
MTCL1-201ENST00000306329 KRTAP12-2P59991 146 aa10.19□□□□□ -0.78
MTCL1-201ENST00000306329 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
MTCL1-201ENST00000306329 DCHS1Q96JQ0 3298 aa10.17□□□□□ -0.78
MTCL1-201ENST00000306329 TENM1Q9UKZ4 2725 aa10.12□□□□□ -0.79
MTCL1-201ENST00000306329 TGP01266 2768 aa10.09□□□□□ -0.79
MTCL1-201ENST00000306329 LAMA5O15230 3695 aa10.08□□□□□ -0.8
MTCL1-201ENST00000306329 NF1P21359 2839 aa10.08□□□□□ -0.8
MTCL1-201ENST00000306329 CSMD1Q96PZ7 3565 aa10.05□□□□□ -0.8
MTCL1-201ENST00000306329 DMDP11532 3685 aa10.05□□□□□ -0.8
MTCL1-201ENST00000306329 KRTAP13-4Q3LI77 160 aa10.02□□□□□ -0.81
MTCL1-201ENST00000306329 TENM2Q9NT68 2774 aa10.01□□□□□ -0.81
MTCL1-201ENST00000306329 SMG1Q96Q15 3661 aaKnown RBP9.97□□□□□ -0.81
MTCL1-201ENST00000306329 KRTAP12-1P59990 96 aa9.96□□□□□ -0.82
MTCL1-201ENST00000306329 MXRA5Q9NR99 2828 aa9.94□□□□□ -0.82
MTCL1-201ENST00000306329 CELSR1Q9NYQ6 3014 aa9.84□□□□□ -0.83
MTCL1-201ENST00000306329 KRTAP3-1Q9BYR8 98 aa9.79□□□□□ -0.84
MTCL1-201ENST00000306329 MUC3AQ02505 3323 aa9.74□□□□□ -0.85
MTCL1-201ENST00000306329 KRTAP15-1Q3LI76 137 aa9.73□□□□□ -0.85
MTCL1-201ENST00000306329 SVEP1Q4LDE5 3571 aa9.71□□□□□ -0.85
MTCL1-201ENST00000306329 PDZD2O15018 2839 aa9.69□□□□□ -0.86
MTCL1-201ENST00000306329 PKD1L1Q8TDX9 2849 aa9.65□□□□□ -0.86
MTCL1-201ENST00000306329 NBPF19A0A087WUL8 3843 aa9.59□□□□□ -0.87
MTCL1-201ENST00000306329 VWFP04275 2813 aa9.56□□□□□ -0.88
MTCL1-201ENST00000306329 KRTAP10-6P60371 365 aaPredicted RBP9.55□□□□□ -0.88
MTCL1-201ENST00000306329 SPENQ96T58 3664 aaKnown RBP9.48□□□□□ -0.89
MTCL1-201ENST00000306329 CUBNO60494 3623 aa9.39□□□□□ -0.91
MTCL1-201ENST00000306329 ANK3Q12955 4377 aaKnown RBP9.39□□□□□ -0.91
MTCL1-201ENST00000306329 BSNQ9UPA5 3926 aa9.37□□□□□ -0.91
MTCL1-201ENST00000306329 CSMD2Q7Z408 3487 aa9.28□□□□□ -0.92
MTCL1-201ENST00000306329 FBN1P35555 2871 aaKnown RBP9.24□□□□□ -0.93
MTCL1-201ENST00000306329 CRCT1Q9UGL9 99 aa9.24□□□□□ -0.93
MTCL1-201ENST00000306329 OTOGQ6ZRI0 2925 aa9.23□□□□□ -0.93
MTCL1-201ENST00000306329 INE1O15225 51 aa9.22□□□□□ -0.93
MTCL1-201ENST00000306329 KRTAP10-12P60413 245 aa9.19□□□□□ -0.94
MTCL1-201ENST00000306329 KRTAP3-2Q9BYR7 98 aa9.16□□□□□ -0.94
MTCL1-201ENST00000306329 SRRM2Q9UQ35 2752 aaKnown RBP9.15□□□□□ -0.95
MTCL1-201ENST00000306329 ZFHX3Q15911 3703 aa9.15□□□□□ -0.95
MTCL1-201ENST00000306329 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
MTCL1-201ENST00000306329 KRTAP3-3Q9BYR6 98 aa9.12□□□□□ -0.95
MTCL1-201ENST00000306329 TRRAPQ9Y4A5 3859 aa9.1□□□□□ -0.95
MTCL1-201ENST00000306329 FBN3Q75N90 2809 aa9.05□□□□□ -0.96
MTCL1-201ENST00000306329 MEGF8Q7Z7M0 2845 aa9.02□□□□□ -0.97
MTCL1-201ENST00000306329 VPS13CQ709C8 3753 aa9.01□□□□□ -0.97
MTCL1-201ENST00000306329 KRTAP12-3P60328 96 aa8.94□□□□□ -0.98
MTCL1-201ENST00000306329 HUWE1Q7Z6Z7 4374 aaKnown RBP8.85□□□□□ -0.99
MTCL1-201ENST00000306329 LCE3AQ5TA76 89 aa8.84□□□□□ -0.99
MTCL1-201ENST00000306329 COL7A1Q02388 2944 aa8.83□□□□□ -1
MTCL1-201ENST00000306329 KRTAP4-5Q9BYR2 181 aa8.78□□□□□ -1
MTCL1-201ENST00000306329 KRTAP10-4P60372 401 aaPredicted RBP8.75□□□□□ -1.01
MTCL1-201ENST00000306329 KRTAP23-1A1A580 65 aa8.72□□□□□ -1.01
MTCL1-201ENST00000306329 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms