RNA–Protein interactions for RNA: ENST00000302787.2

LETM1-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LETM1, Length 5,462 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-201ENST00000302787 COL6A3P12111 3177 aa11.73□□□□□ -0.53
LETM1-201ENST00000302787 FRYLO94915 3013 aa11.71□□□□□ -0.53
LETM1-201ENST00000302787 DMXL2Q8TDJ6 3036 aa11.7□□□□□ -0.54
LETM1-201ENST00000302787 PLAC4Q8WY50 150 aa11.7□□□□□ -0.54
LETM1-201ENST00000302787 APCP25054 2843 aa11.69□□□□□ -0.54
LETM1-201ENST00000302787 KMT2BQ9UMN6 2715 aaPredicted RBP11.67□□□□□ -0.54
LETM1-201ENST00000302787 ASH1LQ9NR48 2969 aaKnown RBP11.65□□□□□ -0.54
LETM1-201ENST00000302787 A8MUU9 505 aa11.64□□□□□ -0.55
LETM1-201ENST00000302787 HIVEP1P15822 2718 aa11.61□□□□□ -0.55
LETM1-201ENST00000302787 C20orf166-AS1Q96NR2 134 aa11.49□□□□□ -0.57
LETM1-201ENST00000302787 ZZEF1O43149 2961 aa11.48□□□□□ -0.57
LETM1-201ENST00000302787 NIPBLQ6KC79 2804 aaeCLIP11.47□□□□□ -0.57
LETM1-201ENST00000302787 CFAP47Q6ZTR5 3102 aa11.45□□□□□ -0.58
LETM1-201ENST00000302787 EYSQ5T1H1 3165 aa11.43□□□□□ -0.58
LETM1-201ENST00000302787 CELSR2Q9HCU4 2923 aa11.42□□□□□ -0.58
LETM1-201ENST00000302787 SPTBN5Q9NRC6 3674 aaKnown RBP11.41□□□□□ -0.58
LETM1-201ENST00000302787 KRTAP1-4P0C5Y4 121 aa11.37□□□□□ -0.59
LETM1-201ENST00000302787 ZANQ9Y493 2812 aa11.34□□□□□ -0.59
LETM1-201ENST00000302787 REV3LO60673 3130 aa11.34□□□□□ -0.59
LETM1-201ENST00000302787 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.6
LETM1-201ENST00000302787 HRNRQ86YZ3 2850 aaPredicted RBP11.32□□□□□ -0.6
LETM1-201ENST00000302787 CRYBG3Q68DQ2 2970 aa11.29□□□□□ -0.6
LETM1-201ENST00000302787 USP34Q70CQ2 3546 aa11.28□□□□□ -0.6
LETM1-201ENST00000302787 DCHS2Q6V1P9 2916 aa11.28□□□□□ -0.6
LETM1-201ENST00000302787 NDUFAF8A1L188 74 aa11.27□□□□□ -0.61
LETM1-201ENST00000302787 SPEGQ15772 3267 aa11.25□□□□□ -0.61
LETM1-201ENST00000302787 TENM4Q6N022 2769 aa11.24□□□□□ -0.61
LETM1-201ENST00000302787 KRTAP21-3Q3LHN1 58 aa11.23□□□□□ -0.61
LETM1-201ENST00000302787 TNRC18O15417 2968 aaPredicted RBP11.19□□□□□ -0.62
LETM1-201ENST00000302787 XP32Q5T750 250 aa11.19□□□□□ -0.62
LETM1-201ENST00000302787 TNP1P09430 55 aa11.18□□□□□ -0.62
LETM1-201ENST00000302787 DMXL1Q9Y485 3027 aa11.17□□□□□ -0.62
LETM1-201ENST00000302787 H0YAA0 97 aa11.13□□□□□ -0.63
LETM1-201ENST00000302787 FBN2P35556 2912 aa11.09□□□□□ -0.63
LETM1-201ENST00000302787 LOC400499M0QZD8 3231 aa11.05□□□□□ -0.64
LETM1-201ENST00000302787 C10orf95Q9H7T3 257 aa11.05□□□□□ -0.64
LETM1-201ENST00000302787 NF1P21359 2839 aa10.97□□□□□ -0.65
LETM1-201ENST00000302787 PP632Q6XCG6 107 aa10.93□□□□□ -0.66
LETM1-201ENST00000302787 TPRXLQ17RH7 258 aa10.89□□□□□ -0.67
LETM1-201ENST00000302787 A0A1B0GVY2 172 aa10.86□□□□□ -0.67
LETM1-201ENST00000302787 KRTAP13-3Q3SY46 172 aa10.84□□□□□ -0.67
LETM1-201ENST00000302787 MYO15AQ9UKN7 3530 aa10.83□□□□□ -0.68
LETM1-201ENST00000302787 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
LETM1-201ENST00000302787 P0C880 135 aa10.8□□□□□ -0.68
LETM1-201ENST00000302787 CELSR1Q9NYQ6 3014 aa10.77□□□□□ -0.69
LETM1-201ENST00000302787 MXRA5Q9NR99 2828 aa10.75□□□□□ -0.69
LETM1-201ENST00000302787 TENM1Q9UKZ4 2725 aa10.74□□□□□ -0.69
LETM1-201ENST00000302787 TENM3Q9P273 2699 aa10.71□□□□□ -0.7
LETM1-201ENST00000302787 TGP01266 2768 aa10.7□□□□□ -0.7
LETM1-201ENST00000302787 TENM2Q9NT68 2774 aa10.65□□□□□ -0.7
LETM1-201ENST00000302787 WDFY3Q8IZQ1 3526 aa10.62□□□□□ -0.71
LETM1-201ENST00000302787 RELNP78509 3460 aa10.62□□□□□ -0.71
LETM1-201ENST00000302787 KRTAP10-10P60014 251 aa10.55□□□□□ -0.72
LETM1-201ENST00000302787 KRTAP12-2P59991 146 aa10.44□□□□□ -0.74
LETM1-201ENST00000302787 ASPMQ8IZT6 3477 aa10.43□□□□□ -0.74
LETM1-201ENST00000302787 ZFHX4Q86UP3 3567 aa10.42□□□□□ -0.74
LETM1-201ENST00000302787 DCHS1Q96JQ0 3298 aa10.39□□□□□ -0.75
LETM1-201ENST00000302787 PDZD2O15018 2839 aa10.38□□□□□ -0.75
LETM1-201ENST00000302787 PRO2289Q9P1D8 64 aa10.36□□□□□ -0.75
LETM1-201ENST00000302787 PKD1L1Q8TDX9 2849 aa10.33□□□□□ -0.76
LETM1-201ENST00000302787 KRTAP3-1Q9BYR8 98 aa10.32□□□□□ -0.76
LETM1-201ENST00000302787 LAMA5O15230 3695 aa10.3□□□□□ -0.76
LETM1-201ENST00000302787 CSMD1Q96PZ7 3565 aa10.27□□□□□ -0.77
LETM1-201ENST00000302787 KRTAP12-1P59990 96 aa10.25□□□□□ -0.77
LETM1-201ENST00000302787 VWFP04275 2813 aa10.23□□□□□ -0.77
LETM1-201ENST00000302787 KRTAP13-4Q3LI77 160 aa10.19□□□□□ -0.78
LETM1-201ENST00000302787 NBPF19A0A087WUL8 3843 aa10.17□□□□□ -0.78
LETM1-201ENST00000302787 SMG1Q96Q15 3661 aaKnown RBP10.13□□□□□ -0.79
LETM1-201ENST00000302787 ANK3Q12955 4377 aaKnown RBP10.1□□□□□ -0.79
LETM1-201ENST00000302787 FBN1P35555 2871 aaKnown RBP10.08□□□□□ -0.8
LETM1-201ENST00000302787 OTOGQ6ZRI0 2925 aa10.06□□□□□ -0.8
LETM1-201ENST00000302787 DMDP11532 3685 aa10.04□□□□□ -0.8
LETM1-201ENST00000302787 KRTAP10-6P60371 365 aaPredicted RBP10.02□□□□□ -0.81
LETM1-201ENST00000302787 FBN3Q75N90 2809 aa9.88□□□□□ -0.83
LETM1-201ENST00000302787 SVEP1Q4LDE5 3571 aa9.88□□□□□ -0.83
LETM1-201ENST00000302787 ZFHX3Q15911 3703 aa9.81□□□□□ -0.84
LETM1-201ENST00000302787 MEGF8Q7Z7M0 2845 aa9.75□□□□□ -0.85
LETM1-201ENST00000302787 MUC3AQ02505 3323 aa9.71□□□□□ -0.85
LETM1-201ENST00000302787 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
LETM1-201ENST00000302787 KRTAP3-2Q9BYR7 98 aa9.68□□□□□ -0.86
LETM1-201ENST00000302787 TRRAPQ9Y4A5 3859 aa9.67□□□□□ -0.86
LETM1-201ENST00000302787 SPENQ96T58 3664 aaKnown RBP9.67□□□□□ -0.86
LETM1-201ENST00000302787 CSMD2Q7Z408 3487 aa9.67□□□□□ -0.86
LETM1-201ENST00000302787 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
LETM1-201ENST00000302787 KRTAP15-1Q3LI76 137 aa9.66□□□□□ -0.86
LETM1-201ENST00000302787 SRRM2Q9UQ35 2752 aaKnown RBP9.65□□□□□ -0.86
LETM1-201ENST00000302787 CUBNO60494 3623 aa9.6□□□□□ -0.87
LETM1-201ENST00000302787 HUWE1Q7Z6Z7 4374 aaKnown RBP9.57□□□□□ -0.88
LETM1-201ENST00000302787 KRTAP10-4P60372 401 aaPredicted RBP9.52□□□□□ -0.88
LETM1-201ENST00000302787 COL7A1Q02388 2944 aa9.51□□□□□ -0.89
LETM1-201ENST00000302787 BSNQ9UPA5 3926 aa9.48□□□□□ -0.89
LETM1-201ENST00000302787 KRTAP4-5Q9BYR2 181 aa9.28□□□□□ -0.92
LETM1-201ENST00000302787 VPS13CQ709C8 3753 aa9.27□□□□□ -0.93
LETM1-201ENST00000302787 KRTAP10-12P60413 245 aa9.27□□□□□ -0.93
LETM1-201ENST00000302787 ALMS1Q8TCU4 4167 aa9.22□□□□□ -0.93
LETM1-201ENST00000302787 INE1O15225 51 aa9.16□□□□□ -0.94
LETM1-201ENST00000302787 LORP23490 312 aaPredicted RBP9.08□□□□□ -0.96
LETM1-201ENST00000302787 KRTAP23-1A1A580 65 aa9.06□□□□□ -0.96
LETM1-201ENST00000302787 KRTAP12-3P60328 96 aa9.05□□□□□ -0.96
LETM1-201ENST00000302787 DNAH9Q9NYC9 4486 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms