RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 USP34Q70CQ2 3546 aa9.7□□□□□ -0.86
CDCP1-201ENST00000296129 SPEGQ15772 3267 aa9.65□□□□□ -0.86
CDCP1-201ENST00000296129 HIVEP1P15822 2718 aa9.64□□□□□ -0.87
CDCP1-201ENST00000296129 CFAP47Q6ZTR5 3102 aa9.64□□□□□ -0.87
CDCP1-201ENST00000296129 REV3LO60673 3130 aa9.61□□□□□ -0.87
CDCP1-201ENST00000296129 STAB2Q8WWQ8 2551 aa9.61□□□□□ -0.87
CDCP1-201ENST00000296129 APCP25054 2843 aa9.6□□□□□ -0.87
CDCP1-201ENST00000296129 DMXL1Q9Y485 3027 aa9.58□□□□□ -0.88
CDCP1-201ENST00000296129 PLAC4Q8WY50 150 aa9.57□□□□□ -0.88
CDCP1-201ENST00000296129 ZZEF1O43149 2961 aa9.55□□□□□ -0.88
CDCP1-201ENST00000296129 DMBT1Q9UGM3 2413 aaPredicted RBP9.54□□□□□ -0.88
CDCP1-201ENST00000296129 A8MU10 97 aa9.52□□□□□ -0.89
CDCP1-201ENST00000296129 ASH1LQ9NR48 2969 aaKnown RBP9.5□□□□□ -0.89
CDCP1-201ENST00000296129 HRNRQ86YZ3 2850 aaPredicted RBP9.5□□□□□ -0.89
CDCP1-201ENST00000296129 A8MUU9 505 aa9.49□□□□□ -0.89
CDCP1-201ENST00000296129 CRYBG3Q68DQ2 2970 aa9.47□□□□□ -0.89
CDCP1-201ENST00000296129 MYO15AQ9UKN7 3530 aa9.42□□□□□ -0.9
CDCP1-201ENST00000296129 LOC400499M0QZD8 3231 aa9.41□□□□□ -0.9
CDCP1-201ENST00000296129 C20orf166-AS1Q96NR2 134 aa9.4□□□□□ -0.91
CDCP1-201ENST00000296129 FLG2Q5D862 2391 aaPredicted RBP9.39□□□□□ -0.91
CDCP1-201ENST00000296129 A6NN06 94 aa9.39□□□□□ -0.91
CDCP1-201ENST00000296129 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
CDCP1-201ENST00000296129 ZANQ9Y493 2812 aa9.38□□□□□ -0.91
CDCP1-201ENST00000296129 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
CDCP1-201ENST00000296129 CELSR2Q9HCU4 2923 aa9.37□□□□□ -0.91
CDCP1-201ENST00000296129 H3BS24 57 aa9.33□□□□□ -0.92
CDCP1-201ENST00000296129 A0A0A0MQY5 61 aa9.3□□□□□ -0.92
CDCP1-201ENST00000296129 DCHS2Q6V1P9 2916 aa9.3□□□□□ -0.92
CDCP1-201ENST00000296129 TENM4Q6N022 2769 aa9.29□□□□□ -0.92
CDCP1-201ENST00000296129 KRTAP25-1Q3LHN0 102 aa9.29□□□□□ -0.92
CDCP1-201ENST00000296129 XP32Q5T750 250 aa9.24□□□□□ -0.93
CDCP1-201ENST00000296129 FBN2P35556 2912 aa9.18□□□□□ -0.94
CDCP1-201ENST00000296129 RELNP78509 3460 aa9.11□□□□□ -0.95
CDCP1-201ENST00000296129 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
CDCP1-201ENST00000296129 ASPMQ8IZT6 3477 aa9.09□□□□□ -0.95
CDCP1-201ENST00000296129 WDFY3Q8IZQ1 3526 aa9.07□□□□□ -0.96
CDCP1-201ENST00000296129 NF1P21359 2839 aa9.06□□□□□ -0.96
CDCP1-201ENST00000296129 TNP1P09430 55 aa9.04□□□□□ -0.96
CDCP1-201ENST00000296129 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
CDCP1-201ENST00000296129 A0A1B0GVY2 172 aa9.02□□□□□ -0.97
CDCP1-201ENST00000296129 ZFHX4Q86UP3 3567 aa8.98□□□□□ -0.97
CDCP1-201ENST00000296129 CELSR1Q9NYQ6 3014 aa8.96□□□□□ -0.97
CDCP1-201ENST00000296129 KRTAP13-3Q3SY46 172 aa8.95□□□□□ -0.98
CDCP1-201ENST00000296129 H0YAA0 97 aa8.94□□□□□ -0.98
CDCP1-201ENST00000296129 LAMA5O15230 3695 aa8.93□□□□□ -0.98
CDCP1-201ENST00000296129 MXRA5Q9NR99 2828 aa8.91□□□□□ -0.98
CDCP1-201ENST00000296129 TENM2Q9NT68 2774 aa8.88□□□□□ -0.99
CDCP1-201ENST00000296129 DMDP11532 3685 aa8.85□□□□□ -0.99
CDCP1-201ENST00000296129 NDUFAF8A1L188 74 aa8.85□□□□□ -0.99
CDCP1-201ENST00000296129 KRTAP10-8P60410 259 aa8.85□□□□□ -0.99
CDCP1-201ENST00000296129 C10orf95Q9H7T3 257 aa8.85□□□□□ -0.99
CDCP1-201ENST00000296129 NBPF19A0A087WUL8 3843 aa8.84□□□□□ -0.99
CDCP1-201ENST00000296129 PDZD2O15018 2839 aa8.83□□□□□ -1
CDCP1-201ENST00000296129 TENM3Q9P273 2699 aa8.82□□□□□ -1
CDCP1-201ENST00000296129 TENM1Q9UKZ4 2725 aa8.82□□□□□ -1
CDCP1-201ENST00000296129 DCHS1Q96JQ0 3298 aa8.8□□□□□ -1
CDCP1-201ENST00000296129 P0C880 135 aa8.77□□□□□ -1.01
CDCP1-201ENST00000296129 CSMD1Q96PZ7 3565 aa8.75□□□□□ -1.01
CDCP1-201ENST00000296129 KRTAP10-10P60014 251 aa8.74□□□□□ -1.01
CDCP1-201ENST00000296129 PP632Q6XCG6 107 aa8.74□□□□□ -1.01
CDCP1-201ENST00000296129 ANK3Q12955 4377 aaKnown RBP8.71□□□□□ -1.02
CDCP1-201ENST00000296129 SMG1Q96Q15 3661 aaKnown RBP8.7□□□□□ -1.02
CDCP1-201ENST00000296129 TGP01266 2768 aa8.63□□□□□ -1.03
CDCP1-201ENST00000296129 OTOGQ6ZRI0 2925 aa8.56□□□□□ -1.04
CDCP1-201ENST00000296129 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
CDCP1-201ENST00000296129 PKD1L1Q8TDX9 2849 aa8.51□□□□□ -1.05
CDCP1-201ENST00000296129 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
CDCP1-201ENST00000296129 SVEP1Q4LDE5 3571 aa8.46□□□□□ -1.05
CDCP1-201ENST00000296129 KRTAP12-2P59991 146 aa8.45□□□□□ -1.06
CDCP1-201ENST00000296129 VWFP04275 2813 aa8.42□□□□□ -1.06
CDCP1-201ENST00000296129 SPENQ96T58 3664 aaKnown RBP8.42□□□□□ -1.06
CDCP1-201ENST00000296129 ZFHX3Q15911 3703 aa8.41□□□□□ -1.06
CDCP1-201ENST00000296129 KRTAP3-1Q9BYR8 98 aa8.4□□□□□ -1.06
CDCP1-201ENST00000296129 FBN1P35555 2871 aaKnown RBP8.39□□□□□ -1.07
CDCP1-201ENST00000296129 BSNQ9UPA5 3926 aa8.36□□□□□ -1.07
CDCP1-201ENST00000296129 CSMD2Q7Z408 3487 aa8.34□□□□□ -1.07
CDCP1-201ENST00000296129 KRTAP12-1P59990 96 aa8.27□□□□□ -1.08
CDCP1-201ENST00000296129 TRRAPQ9Y4A5 3859 aa8.25□□□□□ -1.09
CDCP1-201ENST00000296129 KRTAP13-4Q3LI77 160 aa8.22□□□□□ -1.09
CDCP1-201ENST00000296129 HUWE1Q7Z6Z7 4374 aaKnown RBP8.21□□□□□ -1.09
CDCP1-201ENST00000296129 MT1HL1P0DM35 61 aa8.12□□□□□ -1.11
CDCP1-201ENST00000296129 CUBNO60494 3623 aa8.11□□□□□ -1.11
CDCP1-201ENST00000296129 KRTAP10-6P60371 365 aaPredicted RBP8.1□□□□□ -1.11
CDCP1-201ENST00000296129 FBN3Q75N90 2809 aa8.09□□□□□ -1.11
CDCP1-201ENST00000296129 VPS13CQ709C8 3753 aa7.99□□□□□ -1.13
CDCP1-201ENST00000296129 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
CDCP1-201ENST00000296129 ALMS1Q8TCU4 4167 aa7.98□□□□□ -1.13
CDCP1-201ENST00000296129 MEGF8Q7Z7M0 2845 aa7.98□□□□□ -1.13
CDCP1-201ENST00000296129 KRTAP4-5Q9BYR2 181 aa7.94□□□□□ -1.14
CDCP1-201ENST00000296129 KRTAP3-3Q9BYR6 98 aa7.89□□□□□ -1.15
CDCP1-201ENST00000296129 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
CDCP1-201ENST00000296129 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
CDCP1-201ENST00000296129 SRRM2Q9UQ35 2752 aaKnown RBP7.81□□□□□ -1.16
CDCP1-201ENST00000296129 COL7A1Q02388 2944 aa7.78□□□□□ -1.16
CDCP1-201ENST00000296129 DNAH9Q9NYC9 4486 aa7.77□□□□□ -1.17
CDCP1-201ENST00000296129 AKAP9Q99996 3911 aa7.76□□□□□ -1.17
CDCP1-201ENST00000296129 ZNF469Q96JG9 3925 aaPredicted RBP7.67□□□□□ -1.18
CDCP1-201ENST00000296129 KRTAP10-12P60413 245 aa7.58□□□□□ -1.2
CDCP1-201ENST00000296129 DNAH1Q9P2D7 4330 aa7.58□□□□□ -1.2
CDCP1-201ENST00000296129 CSMD3Q7Z407 3707 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms