RNA–Protein interactions for RNA: ENST00000284073.6

MSI2-201, Transcript of musashi RNA binding protein 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MSI2, Length 6,364 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-201ENST00000284073 RPS29P62273 56 aaKnown RBP8.64□□□□□ -1.03
MSI2-201ENST00000284073 HIVEP1P15822 2718 aa8.63□□□□□ -1.03
MSI2-201ENST00000284073 UTP20O75691 2785 aaKnown RBP8.61□□□□□ -1.03
MSI2-201ENST00000284073 LAMA1P25391 3075 aa8.61□□□□□ -1.03
MSI2-201ENST00000284073 ADGRG4Q8IZF6 3080 aa8.6□□□□□ -1.03
MSI2-201ENST00000284073 TNP1P09430 55 aa8.58□□□□□ -1.04
MSI2-201ENST00000284073 CFAP47Q6ZTR5 3102 aa8.57□□□□□ -1.04
MSI2-201ENST00000284073 ATMQ13315 3056 aa8.54□□□□□ -1.04
MSI2-201ENST00000284073 COL12A1Q99715 3063 aa8.54□□□□□ -1.04
MSI2-201ENST00000284073 P0C880 135 aa8.54□□□□□ -1.04
MSI2-201ENST00000284073 BOD1L1Q8NFC6 3051 aa8.53□□□□□ -1.04
MSI2-201ENST00000284073 FRYLO94915 3013 aa8.53□□□□□ -1.04
MSI2-201ENST00000284073 COL6A3P12111 3177 aa8.51□□□□□ -1.05
MSI2-201ENST00000284073 ITPR2Q14571 2701 aa8.49□□□□□ -1.05
MSI2-201ENST00000284073 IGSF10Q6WRI0 2623 aa8.48□□□□□ -1.05
MSI2-201ENST00000284073 KRTAP10-8P60410 259 aa8.48□□□□□ -1.05
MSI2-201ENST00000284073 KMT2BQ9UMN6 2715 aaPredicted RBP8.48□□□□□ -1.05
MSI2-201ENST00000284073 CELSR2Q9HCU4 2923 aa8.45□□□□□ -1.06
MSI2-201ENST00000284073 ZZEF1O43149 2961 aa8.43□□□□□ -1.06
MSI2-201ENST00000284073 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
MSI2-201ENST00000284073 PP632Q6XCG6 107 aa8.4□□□□□ -1.06
MSI2-201ENST00000284073 FLNCQ14315 2725 aa8.31□□□□□ -1.08
MSI2-201ENST00000284073 SPEGQ15772 3267 aa8.29□□□□□ -1.08
MSI2-201ENST00000284073 CRYBG3Q68DQ2 2970 aa8.28□□□□□ -1.08
MSI2-201ENST00000284073 DCHS2Q6V1P9 2916 aa8.27□□□□□ -1.09
MSI2-201ENST00000284073 KRTAP1-4P0C5Y4 121 aa8.25□□□□□ -1.09
MSI2-201ENST00000284073 NIPBLQ6KC79 2804 aaeCLIP8.25□□□□□ -1.09
MSI2-201ENST00000284073 DMXL1Q9Y485 3027 aa8.23□□□□□ -1.09
MSI2-201ENST00000284073 XP32Q5T750 250 aa8.19□□□□□ -1.1
MSI2-201ENST00000284073 TGP01266 2768 aa8.17□□□□□ -1.1
MSI2-201ENST00000284073 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
MSI2-201ENST00000284073 ZANQ9Y493 2812 aa8.16□□□□□ -1.1
MSI2-201ENST00000284073 TNRC18O15417 2968 aaPredicted RBP8.14□□□□□ -1.11
MSI2-201ENST00000284073 KRTAP13-3Q3SY46 172 aa8.12□□□□□ -1.11
MSI2-201ENST00000284073 FBN2P35556 2912 aa8.1□□□□□ -1.11
MSI2-201ENST00000284073 KRTAP12-2P59991 146 aa8.08□□□□□ -1.12
MSI2-201ENST00000284073 TPRXLQ17RH7 258 aa8.07□□□□□ -1.12
MSI2-201ENST00000284073 NF1P21359 2839 aa8.05□□□□□ -1.12
MSI2-201ENST00000284073 TENM4Q6N022 2769 aa8.03□□□□□ -1.12
MSI2-201ENST00000284073 EYSQ5T1H1 3165 aa8.02□□□□□ -1.12
MSI2-201ENST00000284073 TENM3Q9P273 2699 aa7.99□□□□□ -1.13
MSI2-201ENST00000284073 HRNRQ86YZ3 2850 aaPredicted RBP7.96□□□□□ -1.14
MSI2-201ENST00000284073 MYO15AQ9UKN7 3530 aa7.95□□□□□ -1.14
MSI2-201ENST00000284073 USP34Q70CQ2 3546 aa7.94□□□□□ -1.14
MSI2-201ENST00000284073 LOC400499M0QZD8 3231 aa7.93□□□□□ -1.14
MSI2-201ENST00000284073 TENM1Q9UKZ4 2725 aa7.9□□□□□ -1.14
MSI2-201ENST00000284073 CELSR1Q9NYQ6 3014 aa7.89□□□□□ -1.15
MSI2-201ENST00000284073 PDZD2O15018 2839 aa7.87□□□□□ -1.15
MSI2-201ENST00000284073 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
MSI2-201ENST00000284073 KRTAP10-10P60014 251 aa7.82□□□□□ -1.16
MSI2-201ENST00000284073 SPTBN5Q9NRC6 3674 aaKnown RBP7.82□□□□□ -1.16
MSI2-201ENST00000284073 DCHS1Q96JQ0 3298 aa7.81□□□□□ -1.16
MSI2-201ENST00000284073 KRTAP13-4Q3LI77 160 aa7.78□□□□□ -1.16
MSI2-201ENST00000284073 WDFY3Q8IZQ1 3526 aa7.78□□□□□ -1.16
MSI2-201ENST00000284073 KRTAP3-1Q9BYR8 98 aa7.76□□□□□ -1.17
MSI2-201ENST00000284073 MXRA5Q9NR99 2828 aa7.71□□□□□ -1.17
MSI2-201ENST00000284073 TENM2Q9NT68 2774 aa7.68□□□□□ -1.18
MSI2-201ENST00000284073 CSMD1Q96PZ7 3565 aa7.67□□□□□ -1.18
MSI2-201ENST00000284073 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
MSI2-201ENST00000284073 KRTAP15-1Q3LI76 137 aa7.63□□□□□ -1.19
MSI2-201ENST00000284073 PKD1L1Q8TDX9 2849 aa7.63□□□□□ -1.19
MSI2-201ENST00000284073 VWFP04275 2813 aa7.61□□□□□ -1.19
MSI2-201ENST00000284073 RELNP78509 3460 aa7.6□□□□□ -1.19
MSI2-201ENST00000284073 ZFHX4Q86UP3 3567 aa7.6□□□□□ -1.19
MSI2-201ENST00000284073 KRTAP10-6P60371 365 aaPredicted RBP7.59□□□□□ -1.19
MSI2-201ENST00000284073 ASPMQ8IZT6 3477 aa7.59□□□□□ -1.19
MSI2-201ENST00000284073 SRRM2Q9UQ35 2752 aaKnown RBP7.46□□□□□ -1.22
MSI2-201ENST00000284073 LAMA5O15230 3695 aa7.37□□□□□ -1.23
MSI2-201ENST00000284073 CUBNO60494 3623 aa7.37□□□□□ -1.23
MSI2-201ENST00000284073 INE1O15225 51 aa7.35□□□□□ -1.23
MSI2-201ENST00000284073 FBN3Q75N90 2809 aa7.33□□□□□ -1.24
MSI2-201ENST00000284073 SMG1Q96Q15 3661 aaKnown RBP7.32□□□□□ -1.24
MSI2-201ENST00000284073 MEGF8Q7Z7M0 2845 aa7.31□□□□□ -1.24
MSI2-201ENST00000284073 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
MSI2-201ENST00000284073 FBN1P35555 2871 aaKnown RBP7.28□□□□□ -1.24
MSI2-201ENST00000284073 SVEP1Q4LDE5 3571 aa7.25□□□□□ -1.25
MSI2-201ENST00000284073 KRTAP3-3Q9BYR6 98 aa7.22□□□□□ -1.25
MSI2-201ENST00000284073 KRTAP21-3Q3LHN1 58 aa7.22□□□□□ -1.25
MSI2-201ENST00000284073 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
MSI2-201ENST00000284073 NBPF19A0A087WUL8 3843 aa7.09□□□□□ -1.27
MSI2-201ENST00000284073 DMDP11532 3685 aa7.08□□□□□ -1.28
MSI2-201ENST00000284073 MUC3AQ02505 3323 aa7.05□□□□□ -1.28
MSI2-201ENST00000284073 OTOGQ6ZRI0 2925 aa7.03□□□□□ -1.28
MSI2-201ENST00000284073 CRCT1Q9UGL9 99 aa6.98□□□□□ -1.29
MSI2-201ENST00000284073 ZFHX3Q15911 3703 aa6.97□□□□□ -1.29
MSI2-201ENST00000284073 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
MSI2-201ENST00000284073 SPENQ96T58 3664 aaKnown RBP6.94□□□□□ -1.3
MSI2-201ENST00000284073 CSMD2Q7Z408 3487 aa6.89□□□□□ -1.31
MSI2-201ENST00000284073 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
MSI2-201ENST00000284073 LCE3AQ5TA76 89 aa6.86□□□□□ -1.31
MSI2-201ENST00000284073 LORP23490 312 aaPredicted RBP6.82□□□□□ -1.32
MSI2-201ENST00000284073 TRRAPQ9Y4A5 3859 aa6.82□□□□□ -1.32
MSI2-201ENST00000284073 MT1HL1P0DM35 61 aa6.78□□□□□ -1.32
MSI2-201ENST00000284073 ANK3Q12955 4377 aaKnown RBP6.75□□□□□ -1.33
MSI2-201ENST00000284073 KRTAP23-1A1A580 65 aa6.74□□□□□ -1.33
MSI2-201ENST00000284073 CSMD3Q7Z407 3707 aa6.67□□□□□ -1.34
MSI2-201ENST00000284073 KRTAP10-4P60372 401 aaPredicted RBP6.6□□□□□ -1.35
MSI2-201ENST00000284073 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
MSI2-201ENST00000284073 VPS13CQ709C8 3753 aa6.57□□□□□ -1.36
MSI2-201ENST00000284073 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms