RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 HTTP42858 3142 aa6.98□□□□□ -1.29
SMARCA5-201ENST00000283131 CHD7Q9P2D1 2997 aa6.98□□□□□ -1.29
SMARCA5-201ENST00000283131 XP32Q5T750 250 aa6.98□□□□□ -1.29
SMARCA5-201ENST00000283131 SPEGQ15772 3267 aa6.98□□□□□ -1.29
SMARCA5-201ENST00000283131 H0YAA0 97 aa6.97□□□□□ -1.29
SMARCA5-201ENST00000283131 COL6A3P12111 3177 aa6.96□□□□□ -1.3
SMARCA5-201ENST00000283131 TRANK1O15050 2925 aa6.95□□□□□ -1.3
SMARCA5-201ENST00000283131 KRTAP7-1Q8IUC3 87 aa6.92□□□□□ -1.3
SMARCA5-201ENST00000283131 USP34Q70CQ2 3546 aa6.9□□□□□ -1.3
SMARCA5-201ENST00000283131 DSPP15924 2871 aaKnown RBP6.9□□□□□ -1.3
SMARCA5-201ENST00000283131 SZT2Q5T011 3432 aa6.9□□□□□ -1.3
SMARCA5-201ENST00000283131 TPRXLQ17RH7 258 aa6.9□□□□□ -1.31
SMARCA5-201ENST00000283131 ITPR1Q14643 2758 aa6.87□□□□□ -1.31
SMARCA5-201ENST00000283131 LAMA1P25391 3075 aa6.85□□□□□ -1.31
SMARCA5-201ENST00000283131 TENM3Q9P273 2699 aa6.84□□□□□ -1.31
SMARCA5-201ENST00000283131 ASH1LQ9NR48 2969 aaKnown RBP6.83□□□□□ -1.32
SMARCA5-201ENST00000283131 KRTAP12-2P59991 146 aa6.78□□□□□ -1.32
SMARCA5-201ENST00000283131 CFAP47Q6ZTR5 3102 aa6.78□□□□□ -1.32
SMARCA5-201ENST00000283131 BOD1L1Q8NFC6 3051 aa6.77□□□□□ -1.33
SMARCA5-201ENST00000283131 DMXL2Q8TDJ6 3036 aa6.75□□□□□ -1.33
SMARCA5-201ENST00000283131 FLNCQ14315 2725 aa6.74□□□□□ -1.33
SMARCA5-201ENST00000283131 TENM1Q9UKZ4 2725 aa6.74□□□□□ -1.33
SMARCA5-201ENST00000283131 CHD9Q3L8U1 2897 aa6.72□□□□□ -1.33
SMARCA5-201ENST00000283131 SPTBN5Q9NRC6 3674 aaKnown RBP6.72□□□□□ -1.33
SMARCA5-201ENST00000283131 EYSQ5T1H1 3165 aa6.72□□□□□ -1.33
SMARCA5-201ENST00000283131 LRBAP50851 2863 aa6.7□□□□□ -1.34
SMARCA5-201ENST00000283131 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
SMARCA5-201ENST00000283131 ZZEF1O43149 2961 aa6.69□□□□□ -1.34
SMARCA5-201ENST00000283131 HIVEP1P15822 2718 aa6.68□□□□□ -1.34
SMARCA5-201ENST00000283131 KALRNO60229 2985 aa6.67□□□□□ -1.34
SMARCA5-201ENST00000283131 KRTAP1-4P0C5Y4 121 aa6.66□□□□□ -1.34
SMARCA5-201ENST00000283131 KRTAP15-1Q3LI76 137 aa6.65□□□□□ -1.34
SMARCA5-201ENST00000283131 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
SMARCA5-201ENST00000283131 COL12A1Q99715 3063 aa6.63□□□□□ -1.35
SMARCA5-201ENST00000283131 ATMQ13315 3056 aa6.63□□□□□ -1.35
SMARCA5-201ENST00000283131 KRTAP13-3Q3SY46 172 aa6.62□□□□□ -1.35
SMARCA5-201ENST00000283131 ADGRG4Q8IZF6 3080 aa6.62□□□□□ -1.35
SMARCA5-201ENST00000283131 PDZD2O15018 2839 aa6.59□□□□□ -1.36
SMARCA5-201ENST00000283131 NBPF19A0A087WUL8 3843 aa6.58□□□□□ -1.36
SMARCA5-201ENST00000283131 NF1P21359 2839 aa6.58□□□□□ -1.36
SMARCA5-201ENST00000283131 TGP01266 2768 aa6.58□□□□□ -1.36
SMARCA5-201ENST00000283131 WDFY3Q8IZQ1 3526 aa6.55□□□□□ -1.36
SMARCA5-201ENST00000283131 ASPMQ8IZT6 3477 aa6.53□□□□□ -1.36
SMARCA5-201ENST00000283131 NBEAQ8NFP9 2946 aa6.53□□□□□ -1.36
SMARCA5-201ENST00000283131 TENM4Q6N022 2769 aa6.53□□□□□ -1.36
SMARCA5-201ENST00000283131 TACC2O95359 2948 aa6.5□□□□□ -1.37
SMARCA5-201ENST00000283131 TNRC18O15417 2968 aaPredicted RBP6.49□□□□□ -1.37
SMARCA5-201ENST00000283131 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
SMARCA5-201ENST00000283131 INE1O15225 51 aa6.47□□□□□ -1.37
SMARCA5-201ENST00000283131 MYO15AQ9UKN7 3530 aa6.44□□□□□ -1.38
SMARCA5-201ENST00000283131 DMXL1Q9Y485 3027 aa6.4□□□□□ -1.38
SMARCA5-201ENST00000283131 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
SMARCA5-201ENST00000283131 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.39
SMARCA5-201ENST00000283131 DCHS2Q6V1P9 2916 aa6.37□□□□□ -1.39
SMARCA5-201ENST00000283131 LOC400499M0QZD8 3231 aa6.36□□□□□ -1.39
SMARCA5-201ENST00000283131 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
SMARCA5-201ENST00000283131 ZFHX3Q15911 3703 aa6.33□□□□□ -1.4
SMARCA5-201ENST00000283131 LAMA5O15230 3695 aa6.31□□□□□ -1.4
SMARCA5-201ENST00000283131 CELSR1Q9NYQ6 3014 aa6.28□□□□□ -1.4
SMARCA5-201ENST00000283131 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
SMARCA5-201ENST00000283131 ZFHX4Q86UP3 3567 aa6.24□□□□□ -1.41
SMARCA5-201ENST00000283131 DCHS1Q96JQ0 3298 aa6.2□□□□□ -1.42
SMARCA5-201ENST00000283131 VWFP04275 2813 aa6.18□□□□□ -1.42
SMARCA5-201ENST00000283131 TENM2Q9NT68 2774 aa6.15□□□□□ -1.43
SMARCA5-201ENST00000283131 KRTAP10-12P60413 245 aa6.14□□□□□ -1.43
SMARCA5-201ENST00000283131 ZANQ9Y493 2812 aa6.13□□□□□ -1.43
SMARCA5-201ENST00000283131 FBN2P35556 2912 aa6.1□□□□□ -1.43
SMARCA5-201ENST00000283131 RELNP78509 3460 aa6.09□□□□□ -1.44
SMARCA5-201ENST00000283131 SPENQ96T58 3664 aaKnown RBP6.07□□□□□ -1.44
SMARCA5-201ENST00000283131 SRRM2Q9UQ35 2752 aaKnown RBP6.02□□□□□ -1.45
SMARCA5-201ENST00000283131 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
SMARCA5-201ENST00000283131 DMDP11532 3685 aa5.95□□□□□ -1.46
SMARCA5-201ENST00000283131 KRTAP3-1Q9BYR8 98 aa5.93□□□□□ -1.46
SMARCA5-201ENST00000283131 KRTAP12-3P60328 96 aa5.92□□□□□ -1.46
SMARCA5-201ENST00000283131 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
SMARCA5-201ENST00000283131 COL7A1Q02388 2944 aa5.91□□□□□ -1.46
SMARCA5-201ENST00000283131 CSMD1Q96PZ7 3565 aa5.88□□□□□ -1.47
SMARCA5-201ENST00000283131 SMG1Q96Q15 3661 aaKnown RBP5.88□□□□□ -1.47
SMARCA5-201ENST00000283131 CUBNO60494 3623 aa5.84□□□□□ -1.47
SMARCA5-201ENST00000283131 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
SMARCA5-201ENST00000283131 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
SMARCA5-201ENST00000283131 MUC3AQ02505 3323 aa5.8□□□□□ -1.48
SMARCA5-201ENST00000283131 MXRA5Q9NR99 2828 aa5.79□□□□□ -1.48
SMARCA5-201ENST00000283131 HRNRQ86YZ3 2850 aaPredicted RBP5.76□□□□□ -1.49
SMARCA5-201ENST00000283131 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
SMARCA5-201ENST00000283131 LCE3AQ5TA76 89 aa5.71□□□□□ -1.49
SMARCA5-201ENST00000283131 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
SMARCA5-201ENST00000283131 SVEP1Q4LDE5 3571 aa5.64□□□□□ -1.51
SMARCA5-201ENST00000283131 CSMD2Q7Z408 3487 aa5.64□□□□□ -1.51
SMARCA5-201ENST00000283131 FBN1P35555 2871 aaKnown RBP5.63□□□□□ -1.51
SMARCA5-201ENST00000283131 TRRAPQ9Y4A5 3859 aa5.59□□□□□ -1.51
SMARCA5-201ENST00000283131 KRTAP3-2Q9BYR7 98 aa5.56□□□□□ -1.52
SMARCA5-201ENST00000283131 VPS13CQ709C8 3753 aa5.56□□□□□ -1.52
SMARCA5-201ENST00000283131 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
SMARCA5-201ENST00000283131 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
SMARCA5-201ENST00000283131 BSNQ9UPA5 3926 aa5.47□□□□□ -1.53
SMARCA5-201ENST00000283131 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
SMARCA5-201ENST00000283131 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
SMARCA5-201ENST00000283131 CSMD3Q7Z407 3707 aa5.38□□□□□ -1.55
SMARCA5-201ENST00000283131 OTOGQ6ZRI0 2925 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms